EY659477

Overview
NameEY659477
Unique NameEY659477
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length904
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig84 contig Csv1_Contig84:197..1099. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH601_SYNAS (60 kDa chaperonin 1 OS=Syntrophus aciditrophicus (strain SB) GN=groL1 PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.271e-50
Identity = 108/230 (46.96%), Postives = 157/230 (68.26%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +TG +  + +LG+ +++ ++  LGT +++ I KD+TTI+  A S+ +I+ R+ Q++ ++ ET S YD EKL ER+AKL GGVAVIKVGAATE E++++K R+EDA +AT AA+EEGIVPGGG AL+     +PA+       DER G +IV++A+  P   IA NA             +    G+NA T+KY +M++AG+IDP KV R ALQNAASVA ++LTT+A+
Sbjct:  293 AILTGGKVVSEELGIKLDSITLTDLGTCKRLHITKDNTTIVDGAGSQADIEGRVKQIRTQIEETTSDYDREKLQERLAKLVGGVAVIKVGAATEIEMKEKKARVEDALHATRAAVEEGIVPGGGVALLRT---LPALAGMDLPDDERPGLNIVKRAVEEPMRQIAANAGFEGSIVVEKVKENTGNFGFNADTEKYVDMMEAGIIDPTKVVRFALQNAASVASLLLTTEAM 519          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH601_SORC5 (60 kDa chaperonin 1 OS=Sorangium cellulosum (strain So ce56) GN=groL1 PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.271e-50
Identity = 114/231 (49.35%), Postives = 154/231 (66.67%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADER-LGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +TGA     DLG  +E+ +V  LGTA++V I KD+T I+     K  I+ RI  ++K++A+T S YD EKL ER+AKL+GGVAV+KVGAATETE++++K R+EDA +AT AA+EEGIV GGG AL   +    A  + L+  DER +G  +V++A+ AP   IA NA            +   T GYNA TD YE++L  GVIDPAKV R A+ NAASVA ++LTT+A+
Sbjct:  293 AILTGATPFMEDLGQKLESATVRDLGTAKRVEIDKDNTVIVDGQGDKTAIKGRIEAIRKQIADTTSDYDREKLQERLAKLAGGVAVVKVGAATETEMKEKKARVEDALHATRAAVEEGIVVGGGVALFRAA----ASLESLKFNDERDVGVRLVRRAVEAPLRQIAQNAGVDGTVVAEKVRSGAPTFGYNAATDSYEDLLAGGVIDPAKVVRHAISNAASVAALMLTTEAL 519          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH601_MYCTA (60 kDa chaperonin 1 OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=groL1 PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.271e-50
Identity = 112/230 (48.70%), Postives = 146/230 (63.48%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +TG +  + ++GL +EN  +  LG ARKV + KD TTI+  A   D I  R+AQ+++E+  +DS YD EKL ER+AKL+GGVAVIK GAATE EL++RK RIEDA     AA+EEGIV GGG  L+  +   P + +   + DE  GA+IV+ AL AP   IA N+                  G NA T  YE++L AGV DP KVTR ALQNAAS+AG+ LTT+A+
Sbjct:  291 AILTGGQVISEEVGLTLENADLSLLGKARKVVVTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVTLLQAA---PTLDELKLEGDEATGANIVKVALEAPLKQIAFNSGLEPGVVAEKVRNLPAGHGLNAQTGVYEDLLAAGVADPVKVTRSALQNAASIAGLFLTTEAV 517          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH601_MYCBP (60 kDa chaperonin 1 OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=groL1 PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.271e-50
Identity = 112/230 (48.70%), Postives = 146/230 (63.48%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +TG +  + ++GL +EN  +  LG ARKV + KD TTI+  A   D I  R+AQ+++E+  +DS YD EKL ER+AKL+GGVAVIK GAATE EL++RK RIEDA     AA+EEGIV GGG  L+  +   P + +   + DE  GA+IV+ AL AP   IA N+                  G NA T  YE++L AGV DP KVTR ALQNAAS+AG+ LTT+A+
Sbjct:  291 AILTGGQVISEEVGLTLENADLSLLGKARKVVVTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVTLLQAA---PTLDELKLEGDEATGANIVKVALEAPLKQIAFNSGLEPGVVAEKVRNLPAGHGLNAQTGVYEDLLAAGVADPVKVTRSALQNAASIAGLFLTTEAV 517          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH601_BRASB (60 kDa chaperonin 1 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=groL1 PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.271e-50
Identity = 109/231 (47.19%), Postives = 158/231 (68.40%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +TG +  + DLG+ +EN +++ LG A+KV I K++TTI+  A  K +I+AR+ Q+K ++ ET S YD EKL ER+AKL+GGVAVI+VG ATE E++++K R+EDA NAT AA++EGIVPGGG AL+     V  I +   ++D + G +IV KAL AP   IA NA              +  T G++A ++ Y +M+  G+IDPAKV R ALQ+A+SVAG+++TT+A+
Sbjct:  293 AILTGGQLISDDLGMKLENVTIKMLGRAKKVVIDKENTTIVNGAGKKADIEARVGQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEIEVKEKKDRVEDALNATRAAVQEGIVPGGGVALLRAKKAVGRITN--PNSDVQAGINIVLKALEAPVRQIAENAGVEGSLVVGKILEEKSETFGFDAQSEDYVDMVAKGIIDPAKVVRTALQDASSVAGLLVTTEAM 521          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH60_WIGBR (60 kDa chaperonin OS=Wigglesworthia glossinidia brevipalpis GN=groL PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.660e-50
Identity = 102/230 (44.35%), Postives = 154/230 (66.96%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +T     + ++GL +E +++E +G A++V I KD+TTII    +K  I +R++Q+ +E  E  S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEG+V GGG AL+ +++ +  ++   E+ D+ +G  + ++A+ AP   I  NA            A E  TGYNA T+ Y NM+  G++DP KVTR ALQ AAS+AG+++TT+ +
Sbjct:  293 AILTSGTVISEEMGLDLEKSTLEDMGQAKRVVITKDTTTIIDGTGNKSMISSRVSQINQERDEATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVANRIVNLRG--ENEDQNVGIRVARRAMEAPLRQIVANAGEEPSVIANKVKAGEGNTGYNAATEVYGNMIDMGILDPTKVTRSALQYAASIAGLMITTECM 520          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH60_THEPX (60 kDa chaperonin OS=Thermoanaerobacter sp. (strain X514) GN=groL PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.660e-50
Identity = 110/231 (47.62%), Postives = 157/231 (67.97%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXAS-EWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +TG +  + +LG  +++  ++ LG AR+V + K++TTI+  A    EI+ R+ Q+K ++ ET S YD EKL ER+AKL+GGVAVI+ GAATETEL+++K RIEDA  AT AA+EEGIVPGGG AL+++ + V  + D L D D + GA IV +AL  P   IA NA            A+ +   GY+A  +++ +M +AG++DP KVTR ALQNAAS+A M+LTT+A+
Sbjct:  291 AILTGGQVISEELGYDLKDVRLDMLGRARQVKVTKENTTIVGGAGDAAEIKKRVNQIKAQIEETTSDYDREKLQERLAKLAGGVAVIQAGAATETELKEKKHRIEDALAATKAAVEEGIVPGGGIALLNVIEDVQKVVDSL-DGDFKTGAKIVLRALEEPVRQIAANAGVDGSVIVEKIKAAKDPNFGYDAYKEEFTDMFKAGIVDPTKVTRTALQNAASIASMILTTEAV 520          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH60_THEP3 (60 kDa chaperonin OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=groL PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.660e-50
Identity = 110/231 (47.62%), Postives = 157/231 (67.97%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXAS-EWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +TG +  + +LG  +++  ++ LG AR+V + K++TTI+  A    EI+ R+ Q+K ++ ET S YD EKL ER+AKL+GGVAVI+ GAATETEL+++K RIEDA  AT AA+EEGIVPGGG AL+++ + V  + D L D D + GA IV +AL  P   IA NA            A+ +   GY+A  +++ +M +AG++DP KVTR ALQNAAS+A M+LTT+A+
Sbjct:  291 AILTGGQVISEELGYDLKDVRLDMLGRARQVKVTKENTTIVGGAGDAAEIKKRVNQIKAQIEETTSDYDREKLQERLAKLAGGVAVIQAGAATETELKEKKHRIEDALAATKAAVEEGIVPGGGIALLNVIEDVQKVVDSL-DGDFKTGAKIVLRALEEPVRQIAANAGVDGSVIVEKIKAAKDPNFGYDAYKEEFTDMFKAGIVDPTKVTRTALQNAASIASMILTTEAV 520          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH60_SALTY (60 kDa chaperonin OS=Salmonella typhimurium GN=groL PE=3 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 1.660e-50
Identity = 102/230 (44.35%), Postives = 152/230 (66.09%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            AT+TG    + ++G+ +E  ++E LG A++V I KD+TTII     +  IQ R+AQ+++++ E  S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEG+V GGG AL+ ++  +  +K + E  D+ +G  +  +A+ AP   I  N               +   GYNA T++Y NM+  G++DP KVTR ALQ AASVAG+++TT+ +
Sbjct:  293 ATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKIADLKGQNE--DQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGGDGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECM 520          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH60_SALTI (60 kDa chaperonin OS=Salmonella typhi GN=groL PE=3 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 1.660e-50
Identity = 102/230 (44.35%), Postives = 152/230 (66.09%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            AT+TG    + ++G+ +E  ++E LG A++V I KD+TTII     +  IQ R+AQ+++++ E  S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEG+V GGG AL+ ++  +  +K + E  D+ +G  +  +A+ AP   I  N               +   GYNA T++Y NM+  G++DP KVTR ALQ AASVAG+++TT+ +
Sbjct:  293 ATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKIADLKGQNE--DQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGGDGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECM 520          
The following BLAST results are available for this feature:
BLAST of EY659477 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH601_SYNAS1.271e-5046.9660 kDa chaperonin 1 OS=Syntrophus aciditrophicus (... [more]
CH601_SORC51.271e-5049.3560 kDa chaperonin 1 OS=Sorangium cellulosum (strai... [more]
CH601_MYCTA1.271e-5048.7060 kDa chaperonin 1 OS=Mycobacterium tuberculosis ... [more]
CH601_MYCBP1.271e-5048.7060 kDa chaperonin 1 OS=Mycobacterium bovis (strain... [more]
CH601_BRASB1.271e-5047.1960 kDa chaperonin 1 OS=Bradyrhizobium sp. (strain ... [more]
CH60_WIGBR1.660e-5044.3560 kDa chaperonin OS=Wigglesworthia glossinidia br... [more]
CH60_THEPX1.660e-5047.6260 kDa chaperonin OS=Thermoanaerobacter sp. (strai... [more]
CH60_THEP31.660e-5047.6260 kDa chaperonin OS=Thermoanaerobacter pseudethan... [more]
CH60_SALTY1.660e-5044.3560 kDa chaperonin OS=Salmonella typhimurium GN=gro... [more]
CH60_SALTI1.660e-5044.3560 kDa chaperonin OS=Salmonella typhi GN=groL PE=3... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-E11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659477 ID=EY659477; Name=EY659477; organism=Citrus sinensis; type=EST; length=904bp
CGGNAATTACGCCTCGACCCACGCGTCCGCGAAAGATTATAGCTCTCCTT
CAAGATTTGCCACTGTGACTGGAGCTGAGTTTCAAGCTGGAGACCTGGGC
TTGCTTATTGAAAACACTTCAGTTGAGCAGCTAGGTACAGCTAGAAAGGT
GACCATCAGAAAGGACTCCACTACCATTATTGCTGATGCTGCATCAAAGG
ATGAAATACAAGCTAGAATTGCACAGCTGAAAAAGGAGTTGGCTGAGACG
GATTCTGTTTATGACTCAGAGAAACTTGCTGAGAGAATTGCTAAATTGTC
TGGCGGGGTTGCTGTTATTAAAGTTGGAGCTGCCACAGAAACTGAGCTTG
AGGACCGTAAACTCCGTATTGAAGATGCCAAGAATGCAACCTTTGCAGCC
ATAGAGGAAGGTATTGTTCCTGGTGGTGGTGCTGCTCTGGTTCATCTGTC
TGATCATGTTCCTGCTATCAAGGACAAGCTTGAAGATGCAGATGAGCGAT
TAGGTGCTGACATTGTGCAGAAGGCACTGGTAGCACCTGCATCACTGATA
GCTCACAATGCTGGAGTTGAAGGTGAGGTTGTTGTGGAGAAGGTGAAAGC
TAGTGAATGGACGACTGGTTACAATGCAATGACAGACAAGTATGAGAACA
TGCTTCAGGCTGGAGTTATTGATCCTGCAAAGGTGACAAGATGTGCATTG
CAGAATGCGGCTTCAGTTGCAGGAATGGTCCTGACCACTCAGGCTATTGT
CGTGGAGAAGCCAAAGCCCAAAACTNCGGTAGCCGCTCCGCCACAAGGTC
TTATGGTGTAATCTCTAGGACTCTCCANATTTAGTTAGGGAGTTTATAGA
TGAAAGATGGGTTTATTGCCGTGACTGAAAAGAAAGTTTACTTAATTGAT
ATAA
back to top