EY659477

Overview
NameEY659477
Unique NameEY659477
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length904
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig84 contig Csv1_Contig84:197..1099. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH60_LACF3 (60 kDa chaperonin OS=Lactobacillus fermentum (strain IFO 3956 / LMG 18251) GN=groL PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 2.024e-56
Identity = 119/233 (51.07%), Postives = 164/233 (70.39%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE---DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +TG    + DLG+ +++ +++QLG+A KVTI KD+TTI+  + +K+ I  R+ Q+KK +AET S +D EKL ER+AKL+GGVAV+KVGAATETEL+++K RIEDA NAT AA++EG VPGGG ALV++   +PA+ D++E     DE  G  IV+ AL AP   IA NA              +   GYNA  DK+E+M+ AG++DP KVTR ALQNAASV+ ++LTT+A+
Sbjct:  291 AVLTGGTVISDDLGMQLKDATIDQLGSANKVTITKDATTIVDGSGNKEAIAERVDQIKKAIAETTSDFDKEKLQERLAKLAGGVAVVKVGAATETELKEKKYRIEDALNATRAAVQEGFVPGGGTALVNV---IPAL-DEVEASATGDEATGIKIVKAALEAPVRQIAENAGLEGSVIVNQLKQEKPGVGYNAADDKFEDMVAAGIVDPTKVTRSALQNAASVSALLLTTEAV 519          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH60_BACSU (60 kDa chaperonin OS=Bacillus subtilis GN=groL PE=1 SV=3)

HSP 1 Score: 219.164 bits (557), Expect = 2.644e-56
Identity = 118/230 (51.30%), Postives = 158/230 (68.70%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +TG E    DLGL +++T + QLG A KV + K++TTI+  A   D+I AR+ Q++ ++ ET S +D EKL ER+AKL+GGVAVIKVGAATETEL++RKLRIEDA N+T AA+EEGIV GGG ALV++ + V A++    + D + G +IV +AL  P   IAHNA              E   G+NA T ++ NM++ G++DP KVTR ALQNAASVA M LTT+A+
Sbjct:  291 AVLTGGEVITEDLGLDLKSTQIAQLGRASKVVVTKENTTIVEGAGETDKISARVTQIRAQVEETTSEFDREKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVSGGGTALVNVYNKVAAVE---AEGDAQTGINIVLRALEEPIRQIAHNAGLEGSVIVERLKNEEIGVGFNAATGEWVNMIEKGIVDPTKVTRSALQNAASVAAMFLTTEAV 517          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH60_BACLD (60 kDa chaperonin OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=groL PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.644e-56
Identity = 119/228 (52.19%), Postives = 157/228 (68.86%), Query Frame = 2
Query:   65 VTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            +TGAE    DLGL +++T + QLG A KV + K++TTI+  A   ++I AR+ Q++ ++ ET S +D EKL ER+AKL+GGVAVIKVGAATETEL++RKLRIEDA N+T AA+EEGIV GGG ALV++ + V A++    + DE  G +IV +AL  P   IAHNA              E   GYNA T ++ NM+  G++DP KVTR ALQNAASVA M LTT+A+
Sbjct:  293 LTGAEVITEDLGLDLKSTQINQLGRASKVVVTKENTTIVEGAGDTEQIAARVNQIRAQVEETTSEFDKEKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVSGGGTALVNVYNKVAALE---AEGDELTGINIVLRALEEPIRQIAHNAGLEGSVIVERLKNEEIGVGYNAATGEWVNMIDKGIVDPTKVTRSALQNAASVAAMFLTTEAV 517          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH60_OCEIH (60 kDa chaperonin OS=Oceanobacillus iheyensis GN=groL PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 3.453e-56
Identity = 116/230 (50.43%), Postives = 157/230 (68.26%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +TGAE    DLGL +++ S++QLG A KV + K++TT++  +   + I +R+AQ++ +  E+ S +D EKL ER+AKL+GGVAVIKVGAATETEL++RKLRIEDA N+T A +EEG+VPGGG ALV++   V    +   + DE  GA IV +AL  P   I HNA              +   GYNA TD++ NM++AG++DP KVTR ALQNAASVA M LTT+A+
Sbjct:  291 AVLTGAEVITEDLGLDLKSASIDQLGRASKVVVTKENTTVVEGSGDPEAISSRVAQIRAQAEESTSDFDKEKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAGVEEGMVPGGGTALVNIHRQV---SELTLEGDEATGASIVLRALEEPVRQIVHNAGLEGSIIVERLKGEKVGIGYNAATDEWVNMVEAGIVDPTKVTRSALQNAASVAAMFLTTEAV 517          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH601_CHLCV (60 kDa chaperonin 1 OS=Chlamydophila caviae GN=groL1 PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 3.453e-56
Identity = 111/230 (48.26%), Postives = 163/230 (70.87%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +TG +  + +LG+ +ENT++  LG A+KV + K+ TTI+    SK++I++R   +KK++ ++ S YD EKL ER+AKLSGGVAVI+VGAATE E++++K R++DA++AT AA+EEGI+PGGG ALV     + A    L + DE++GA IV KAL AP   IA NA            +   + GY+A+ D Y +M++AG++DP KVTRCAL++AASVAG++LTT+A+
Sbjct:  293 AILTGGQLISEELGMKLENTTLAMLGKAKKVIVSKEDTTIVEGLGSKEDIESRCESIKKQIEDSTSDYDKEKLQERLAKLSGGVAVIRVGAATEIEMKEKKDRVDDAQHATLAAVEEGILPGGGTALVRCIPTLEAFIPILTNEDEQIGARIVLKALSAPLKQIAANAGKEGAIICQQVLSRSSSEGYDALRDAYTDMIEAGILDPTKVTRCALESAASVAGLLLTTEAL 522          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH60_LACDB (60 kDa chaperonin OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365) GN=groL PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 4.510e-56
Identity = 116/230 (50.43%), Postives = 159/230 (69.13%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +TG    + DLGL +++T + QLG AR+VTI KDSTTI+  + +K+ IQ R+  ++K++ +T S +D +KL ER+AKL+GGVAVI VGAATETEL++R+ R+EDA NAT AA++EG V GGG ALV++ + V A K   +  DE+ G +IV +AL AP   IA NA              +   GYNA  DKY NM+  G+IDP +VTR ALQNAAS+AG++LTT+A+
Sbjct:  291 AALTGGTVISEDLGLELKDTQLSQLGQARRVTITKDSTTIVDGSGAKEAIQERVDTIRKQIEDTSSDFDKKKLQERLAKLTGGVAVIHVGAATETELKERRYRVEDALNATRAAVDEGYVAGGGTALVNVEEAVKATKGDTD--DEQTGINIVARALTAPVRQIAENAGQEGSVVVDHLRKVDPEVGYNAAEDKYVNMIDEGIIDPTQVTRSALQNAASIAGLLLTTEAV 518          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH60_LACDA (60 kDa chaperonin OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) GN=groL PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 4.510e-56
Identity = 116/230 (50.43%), Postives = 159/230 (69.13%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +TG    + DLGL +++T + QLG AR+VTI KDSTTI+  + +K+ IQ R+  ++K++ +T S +D +KL ER+AKL+GGVAVI VGAATETEL++R+ R+EDA NAT AA++EG V GGG ALV++ + V A K   +  DE+ G +IV +AL AP   IA NA              +   GYNA  DKY NM+  G+IDP +VTR ALQNAAS+AG++LTT+A+
Sbjct:  291 AALTGGTVISEDLGLELKDTQLSQLGQARRVTITKDSTTIVDGSGAKEAIQERVDTIRKQIEDTSSDFDKKKLQERLAKLTGGVAVIHVGAATETELKERRYRVEDALNATRAAVDEGYVAGGGTALVNVEEAVKATKGDTD--DEQTGINIVARALTAPVRQIAENAGQEGSVVVDHLRKVDPEVGYNAAEDKYVNMIDEGIIDPTQVTRSALQNAASIAGLLLTTEAV 518          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH60_EXIS2 (60 kDa chaperonin OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=groL PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 5.890e-56
Identity = 118/228 (51.75%), Postives = 153/228 (67.11%), Query Frame = 2
Query:   65 VTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            VTGAE    +LGL ++ T + QLG A KV + KD+TTI+      D I AR+  ++ ++ ET S +D EKL ER+AKL+GGVAV+KVGAATETEL++RKLRIEDA NAT AA+EEGIV GGG A +H++  V +I   +   DE  G +IV +AL AP   IA NA                  GYNA TD+Y +M++ G++DPAKVTR ALQNAASV+ M LTT+A+
Sbjct:  293 VTGAELITEELGLDLKETQITQLGRASKVVVSKDNTTIVEGNGHSDSITARVGAIRSQIEETTSDFDREKLQERLAKLAGGVAVVKVGAATETELKERKLRIEDALNATRAAVEEGIVAGGGTAFIHVTKAVESIL-AVTTGDEATGVNIVLRALEAPLRQIAENAGQEGSVIVERLKHEAQGMGYNAATDEYVDMIETGIVDPAKVTRSALQNAASVSAMFLTTEAV 519          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH60_CLOPH (60 kDa chaperonin OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=groL PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 5.890e-56
Identity = 116/229 (50.66%), Postives = 161/229 (70.31%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQA 745
            A +TG    + +LGL ++  +++QLG A+ V I+K++T I+    +K EI+ARI+Q+K ++AET S +D EKL ER+AKL+GGVAVI+VGAATETE++++KLR+EDA  AT AA+EEGI+ GGG+A +H S  V  +  KLE  DER GA I+ KAL AP S IA NA              +   G+NA+T+KY +M++ G++DP+KVTR ALQNA SVA   LTT+A
Sbjct:  291 AILTGGTVISDELGLDLKEATLDQLGRAKSVKIQKENTIIVDGEGNKAEIEARISQIKAQIAETTSEFDKEKLQERLAKLAGGVAVIRVGAATETEMKEKKLRMEDALAATRAAVEEGIIAGGGSAYIHASKEVAKLAAKLE-GDERTGAQIILKALEAPLSCIAQNAGLEGAVIVNKVREKKTGVGFNALTEKYVDMVEDGILDPSKVTRSALQNATSVASTFLTTEA 518          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH60_BACSK (60 kDa chaperonin OS=Bacillus clausii (strain KSM-K16) GN=groL PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 5.890e-56
Identity = 117/230 (50.87%), Postives = 156/230 (67.83%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +TG +    DLGL +++ ++E LG A KV + K++TTI+  A   ++I  R+ QLK ++ ET S +D EKL ER+AKL+GGVAV+KVGAATETE+++RKLRIEDA N+T AA+EEGIV GGG ALV++   + A+K      DE  G +IV +AL  P   IAHNA            A E   GYNA T +Y NM++ G++DP KVTR ALQNAASV+ M LTT+A+
Sbjct:  291 AILTGGQVITEDLGLDLKSATIESLGRAAKVVVTKENTTIVEGAGDPEQISGRVNQLKAQVEETTSEFDKEKLQERLAKLAGGVAVLKVGAATETEMKERKLRIEDALNSTRAAVEEGIVAGGGTALVNV---IKAVKAVDATGDEATGVNIVLRALEEPVRQIAHNAGLEGSIIVEKLKAEEVGVGYNAATGEYVNMVETGILDPVKVTRSALQNAASVSAMFLTTEAV 517          
The following BLAST results are available for this feature:
BLAST of EY659477 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_LACF32.024e-5651.0760 kDa chaperonin OS=Lactobacillus fermentum (stra... [more]
CH60_BACSU2.644e-5651.3060 kDa chaperonin OS=Bacillus subtilis GN=groL PE=... [more]
CH60_BACLD2.644e-5652.1960 kDa chaperonin OS=Bacillus licheniformis (strai... [more]
CH60_OCEIH3.453e-5650.4360 kDa chaperonin OS=Oceanobacillus iheyensis GN=g... [more]
CH601_CHLCV3.453e-5648.2660 kDa chaperonin 1 OS=Chlamydophila caviae GN=gro... [more]
CH60_LACDB4.510e-5650.4360 kDa chaperonin OS=Lactobacillus delbrueckii sub... [more]
CH60_LACDA4.510e-5650.4360 kDa chaperonin OS=Lactobacillus delbrueckii sub... [more]
CH60_EXIS25.890e-5651.7560 kDa chaperonin OS=Exiguobacterium sibiricum (st... [more]
CH60_CLOPH5.890e-5650.6660 kDa chaperonin OS=Clostridium phytofermentans (... [more]
CH60_BACSK5.890e-5650.8760 kDa chaperonin OS=Bacillus clausii (strain KSM-... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-E11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659477 ID=EY659477; Name=EY659477; organism=Citrus sinensis; type=EST; length=904bp
CGGNAATTACGCCTCGACCCACGCGTCCGCGAAAGATTATAGCTCTCCTT
CAAGATTTGCCACTGTGACTGGAGCTGAGTTTCAAGCTGGAGACCTGGGC
TTGCTTATTGAAAACACTTCAGTTGAGCAGCTAGGTACAGCTAGAAAGGT
GACCATCAGAAAGGACTCCACTACCATTATTGCTGATGCTGCATCAAAGG
ATGAAATACAAGCTAGAATTGCACAGCTGAAAAAGGAGTTGGCTGAGACG
GATTCTGTTTATGACTCAGAGAAACTTGCTGAGAGAATTGCTAAATTGTC
TGGCGGGGTTGCTGTTATTAAAGTTGGAGCTGCCACAGAAACTGAGCTTG
AGGACCGTAAACTCCGTATTGAAGATGCCAAGAATGCAACCTTTGCAGCC
ATAGAGGAAGGTATTGTTCCTGGTGGTGGTGCTGCTCTGGTTCATCTGTC
TGATCATGTTCCTGCTATCAAGGACAAGCTTGAAGATGCAGATGAGCGAT
TAGGTGCTGACATTGTGCAGAAGGCACTGGTAGCACCTGCATCACTGATA
GCTCACAATGCTGGAGTTGAAGGTGAGGTTGTTGTGGAGAAGGTGAAAGC
TAGTGAATGGACGACTGGTTACAATGCAATGACAGACAAGTATGAGAACA
TGCTTCAGGCTGGAGTTATTGATCCTGCAAAGGTGACAAGATGTGCATTG
CAGAATGCGGCTTCAGTTGCAGGAATGGTCCTGACCACTCAGGCTATTGT
CGTGGAGAAGCCAAAGCCCAAAACTNCGGTAGCCGCTCCGCCACAAGGTC
TTATGGTGTAATCTCTAGGACTCTCCANATTTAGTTAGGGAGTTTATAGA
TGAAAGATGGGTTTATTGCCGTGACTGAAAAGAAAGTTTACTTAATTGAT
ATAA
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