EY659476

Overview
NameEY659476
Unique NameEY659476
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length957
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12645 contig Csv1_Contig12645:151..1108. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659476 vs. ExPASy Swiss-Prot
Match: NCPR_MOUSE (NADPH--cytochrome P450 reductase OS=Mus musculus GN=Por PE=1 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 3.177e-39
Identity = 87/246 (35.37%), Postives = 135/246 (54.88%), Query Frame = 2
Query:   65 LLGLSPDTYFSLHTDKEDGTPVGKSTLPPTFPPCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAG--KDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALXEAGAELGPSLLFFGCRNP*MDTFMR 796
            +LG   D   SL+   E+         P T+     RTALT Y                      +E + L  +AS +G  K+ Y  W+V ++R +L ++ ++PS +PP+      ++PRLQ RYYSI+SS +V P+ +H+    V  +  +GRV+KG+ ++W++   P  ++   +  P+FVR+S F+LP     P+IM+GPGTG+APF GF+QER  L E G E+G +LL++GCR    D   R
Sbjct:  337 ILGADLDVIMSLNNLDEESNKKHPFPCPTTY-----RTALTYYLDITNPPRTNVLYELAQYASEPSEQEHLHKMASSSGEGKELYLSWVVEARRHILAILQDYPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVHICAVAVEYEAKSGRVNKGVATSWLRTKEPAGENGRRALVPMFVRKSQFRLPFKPTTPVIMVGPGTGVAPFMGFIQERAWLREQGKEVGETLLYYGCRRSDEDYLYR 576          
BLAST of EY659476 vs. ExPASy Swiss-Prot
Match: NOS2_RABIT (Nitric oxide synthase, inducible (Fragment) OS=Oryctolagus cuniculus GN=NOS2 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.689e-32
Identity = 92/237 (38.82%), Postives = 118/237 (49.79%), Query Frame = 2
Query:   77 SPDTYFSLHTDKEDGTPVGKSTLPPTFPPCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGR--VHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQ-SNFKLPADAKVPIIMIGPGTGLAPFRGFLQERF-ALXEAGAELGPSLLFFGCRNP 775
            SPD    L    E G+   K       PPCSLR ALT +                      T   RL  L  P+   EY  W  ++  + LEV+ EFPS + P   F  + +P L+PRYYSISSS    PS +H+T A+V  +T  G+  +H G+CSTW+ N  P +        P FVR  S F+LP D   P I+IGPGTG+APFR F Q+R       G + G   L FGCR+P
Sbjct:  167 SPDQTVCLEVHDESGSYWVKDK---RLPPCSLRQALTYFLDITTPPTQLQLHKLARFATEETHRQRLEALCQPS---EYNDWKFSNNPTFLEVLEEFPSLRVP-AAFLLSQLPILKPRYYSISSSQDHTPSEVHLTVAVVTYRTRDGQGPLHHGVCSTWINNLKPEDP------VPCFVRSVSGFQLPEDPSQPCILIGPGTGIAPFRSFWQQRLHDSQHRGLKGGRMTLVFGCRHP 390          
BLAST of EY659476 vs. ExPASy Swiss-Prot
Match: NOS2_RAT (Nitric oxide synthase, inducible OS=Rattus norvegicus GN=Nos2 PE=1 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 3.762e-32
Identity = 92/237 (38.82%), Postives = 118/237 (49.79%), Query Frame = 2
Query:   77 SPDTYFSLHTDKEDGTPVGKSTLPPTFPPCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGR--VHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQ-SNFKLPADAKVPIIMIGPGTGLAPFRGFLQERF-ALXEAGAELGPSLLFFGCRNP 775
            SPD    L    E G+   K       PPCSLR ALT +                      T   RL  L  P+   EY  W  ++  + LEV+ EFPS + P   F  + +P L+PRYYSISSS    PS +H+T A+V  +T  G+  +H G+CSTW+ N  P +        P FVR  S F+LP D   P I+IGPGTG+APFR F Q+R       G + G   L FGCR+P
Sbjct:  793 SPDQTVCLEVLDESGSYWVKDK---RLPPCSLRQALTYFLDITTPPTQLQLHKLARFATEETHRQRLEALCQPS---EYNDWKFSNNPTFLEVLEEFPSLRVP-AAFLLSQLPILKPRYYSISSSQDHTPSEVHLTVAVVTYRTRDGQGPLHHGVCSTWINNLKPEDP------VPCFVRSVSGFQLPEDPSQPCILIGPGTGIAPFRSFWQQRLHDSQHRGLKGGRMTLVFGCRHP 1016          
BLAST of EY659476 vs. ExPASy Swiss-Prot
Match: NOS2_MOUSE (Nitric oxide synthase, inducible OS=Mus musculus GN=Nos2 PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.438e-31
Identity = 84/210 (40.00%), Postives = 110/210 (52.38%), Query Frame = 2
Query:  158 PPCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGR--VHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQ-SNFKLPADAKVPIIMIGPGTGLAPFRGFLQERF-ALXEAGAELGPSLLFFGCRNP 775
            PPCSL  ALT +                      T+  RL  L  P+   EY  W  ++  + LEV+ EFPS   P   F  + +P L+PRYYSISSS    PS +H+T A+V  +T  G+  +H G+CSTW++N  P +        P FVR  S F+LP D   P I+IGPGTG+APFR F Q+R       G + G   L FGCR+P
Sbjct:  814 PPCSLSQALTYFLDITTPPTQLQLHKLARFATDETDRQRLEALCQPS---EYNDWKFSNNPTFLEVLEEFPSLHVP-AAFLLSQLPILKPRYYSISSSQDHTPSEVHLTVAVVTYRTRDGQGPLHHGVCSTWIRNLKPQDP------VPCFVRSVSGFQLPEDPSQPCILIGPGTGIAPFRSFWQQRLHDSQHKGLKGGRMSLVFGCRHP 1013          
BLAST of EY659476 vs. ExPASy Swiss-Prot
Match: NOS2_CAVPO (Nitric oxide synthase, inducible OS=Cavia porcellus GN=NOS2 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.581e-30
Identity = 83/210 (39.52%), Postives = 108/210 (51.43%), Query Frame = 2
Query:  158 PPCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGR--VHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSN-FKLPADAKVPIIMIGPGTGLAPFRGFLQERF-ALXEAGAELGPSLLFFGCRNP 775
            PPCSL  ALT +                       E  RL  L+ P+   EY +W   +  + LEV+ EFPS + P   F  + +P L+PRYYSISSS    P+ +H+T A+V  +T  GR  +H G+CSTW     P +        P  VR  N F+LP D   P I+IGPGTG+APFR F Q+R   L   G + G   L FGCR+P
Sbjct:  819 PPCSLSQALTYFLDITTPPTQLQLQKLARLATEQAERLRLESLSQPS---EYNKWKFTNSPTFLEVLEEFPSLRVP-AAFLLSQLPILKPRYYSISSSLDHTPAEVHLTVAVVTYRTRDGRGPLHHGVCSTWFSGLKPQDP------VPCLVRSVNSFQLPKDPSQPCILIGPGTGIAPFRSFWQQRLHNLKHTGLQGGRMTLLFGCRHP 1018          
BLAST of EY659476 vs. ExPASy Swiss-Prot
Match: NOS2_CANFA (Nitric oxide synthase, inducible OS=Canis familiaris GN=NOS2 PE=2 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 2.064e-30
Identity = 84/217 (38.71%), Postives = 109/217 (50.23%), Query Frame = 2
Query:  158 PPCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGR--VHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERF-ALXEAGAELGPSLLFFGCRNP*MDTFMR 796
            PPCSL  ALT +                       E  RL  L  P+   EY +W + +  + LEV+ EFPS +   G F  + +P L+PRYYSISSS    P  +H+T A++   T  G+  +H G+CSTW+ N  P +        P FVR + NFKLP D   P I+IGPGTG+APFR F Q+R   +   G       L FGCR P  D   R
Sbjct:  817 PPCSLSQALTYFLDITTPPTHLLLRKLAQLAHQYAERHRLEILCHPS---EYNKWKLTNSPTFLEVLEEFPSLRVSAG-FLLSQLPILKPRYYSISSSRDCTPMEVHLTVAVLVYPTRDGQGPLHHGVCSTWLSNLKPQDP------VPCFVRSAGNFKLPEDPSRPCILIGPGTGIAPFRSFWQQRLHDIKHKGLRGSRMTLVFGCRRPDEDHLYR 1023          
BLAST of EY659476 vs. ExPASy Swiss-Prot
Match: NDOR1_BOVIN (NADPH-dependent diflavin oxidoreductase 1 (Fragment) OS=Bos taurus GN=NDOR1 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.521e-30
Identity = 86/268 (32.09%), Postives = 133/268 (49.63%), Query Frame = 2
Query:   68 LGLSPDTYFSLHTDKEDGTPVGKSTLPPTFP-PCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFP---SAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALXEAGAELGPSLLFFGCRNP*MDTFMRMSSXTLFKVCTFTVDCCLSRE 859
            LGL P+ +F+L   +E G      T P   P PCS+R  +++Y                       E ++LR   S  G++E  ++    +R+ LEV+ +FP   +A PP   +   ++P ++PR +SI+SS R  PSR+H+  A+V  +T      +GLCS+W+ +   ++ +      P++VR      P    VP+IM+GPGTG+APFR  +QER A  E G     ++LFFGCR    D +       L      T+    SRE
Sbjct:  266 LGLDPEQHFTLQP-REPGV-----TCPTRLPQPCSVRRLVSQYLDIASVPRRSFFELLACLSPHELEREKLREFGSARGQEELCEYCTRPRRTALEVLCDFPHTAAAVPP--DYLLDLLPLIRPRAFSIASSLRAHPSRLHILVAVVQYQTRLREPRRGLCSSWLAS---LDPAQGPVRVPLWVRSGGLTFPKTPDVPVIMVGPGTGVAPFRAAIQERVAQGETG-----NVLFFGCRRRDQDFYWEAEWEQLQARGCLTLVTAFSRE 517          
BLAST of EY659476 vs. ExPASy Swiss-Prot
Match: NCPR_SALTR (NADPH--cytochrome P450 reductase (Fragments) OS=Salmo trutta PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.521e-30
Identity = 80/238 (33.61%), Postives = 122/238 (51.26%), Query Frame = 2
Query:   65 LLGLSPDTYFSLHTDKEDGTPVGKSTLPPTFPPCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLAS--PAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALXEAGAELGPSLLFFGCRN 772
            +LG+  D+  SL+   E+         P T+     RTALT Y                       + +    +AS  P GK  Y  +++   R++L ++ + PS +PP+      ++PRLQ RYYSI+SS +V P+ IH+   LV   T      KG+ +TW+K                ++R+S F+LP  A  P+IM+GPGTG+APF GF+QER  L E+G E+G ++L+ GCR+
Sbjct:  282 ILGVDLDSVISLNNLDEESNKKHPFPCPTTY-----RTALTHYLDIIHPPRTNVLYELAQYATDLKDQENTDSMASSAPEGKALYQSFVLEDNRNILAILEDLPSLRPPID-HLCELMPRLQARYYSIASSSKVHPNSIHICAVLVEYXT------KGVATTWLK----------------YIRKSQFRLPFKASNPVIMVGPGTGIAPFMGFIQERGWLKESGKEVGETVLYCGCRH 491          
BLAST of EY659476 vs. ExPASy Swiss-Prot
Match: NOS2_BOVIN (Nitric oxide synthase, inducible OS=Bos taurus GN=NOS2 PE=2 SV=3)

HSP 1 Score: 130.568 bits (327), Expect = 1.338e-29
Identity = 81/210 (38.57%), Postives = 109/210 (51.90%), Query Frame = 2
Query:  158 PPCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGR--VHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQ-SNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALXE-AGAELGPSLLFFGCRNP 775
            PPCSL  ALT +                       E  RL  L  P+   +Y +W   +  + LEV+ EFPS +     F  + +P L+PRYYSISSS  + P+ IH+T A++  +T  G+  +H G+CSTW+ +  P +        P FVR  S F+LP D   P I+IGPGTG+APFR F Q+R    E  G + G   L FGCR P
Sbjct:  820 PPCSLSQALTYFLDITTPPTQLLLRKLAQLATEEAEKQRLETLCQPS---DYNKWKFTNSPTFLEVLEEFPSLRVSAS-FLLSQLPILKPRYYSISSSRDLTPTEIHLTVAVLTYRTRDGQGPLHHGVCSTWLSSLKPQDP------VPCFVRSASGFQLPEDRSRPCILIGPGTGIAPFRSFWQQRLHEAEHKGLQGGRMTLVFGCRRP 1019          
BLAST of EY659476 vs. ExPASy Swiss-Prot
Match: NOS3_MOUSE (Nitric oxide synthase, endothelial OS=Mus musculus GN=Nos3 PE=1 SV=3)

HSP 1 Score: 129.798 bits (325), Expect = 2.282e-29
Identity = 86/235 (36.60%), Postives = 118/235 (50.21%), Query Frame = 2
Query:  113 EDGTPVGKS---TLPPTFPPCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGR--VHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALXE-AGAELGPSLLFFGCRNP*MDTFMR 796
            E G+P G        P  PPC+LR ALT +                      +E   L  L+    +  Y +W   S  +LLEV+ +FPS   P  +    + P LQPRYYS+SS+P   P  IH+T A++  +T  G   +H G+CSTWM       K+ D    P F+R + +F+LP D  +P I++GPGTG+APFRGF Q+R    E  G +  P  L FGCR   +D   R
Sbjct:  832 EKGSPGGPPPGWVRDPRLPPCTLRQALTYFLDITSPPSPRLLRLLSTLAEESSEQQELEALSQDPRR--YEEWKWFSCPTLLEVLEQFPSVALPAPLILTQL-PLLQPRYYSVSSAPSAHPGEIHLTIAVLAYRTQDGLGPLHYGVCSTWMSQL----KAGDP--VPCFIRGAPSFRLPPDPNLPCILVGPGTGIAPFRGFWQDRLHDIEIKGLQPAPMTLVFGCRCSQLDHLYR 1057          
The following BLAST results are available for this feature:
BLAST of EY659476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 122
Match NameE-valueIdentityDescription
NCPR_MOUSE3.177e-3935.37NADPH--cytochrome P450 reductase OS=Mus musculus G... [more]
NOS2_RABIT1.689e-3238.82Nitric oxide synthase, inducible (Fragment) OS=Ory... [more]
NOS2_RAT3.762e-3238.82Nitric oxide synthase, inducible OS=Rattus norvegi... [more]
NOS2_MOUSE2.438e-3140.00Nitric oxide synthase, inducible OS=Mus musculus G... [more]
NOS2_CAVPO1.581e-3039.52Nitric oxide synthase, inducible OS=Cavia porcellu... [more]
NOS2_CANFA2.064e-3038.71Nitric oxide synthase, inducible OS=Canis familiar... [more]
NDOR1_BOVIN3.521e-3032.09NADPH-dependent diflavin oxidoreductase 1 (Fragmen... [more]
NCPR_SALTR3.521e-3033.61NADPH--cytochrome P450 reductase (Fragments) OS=Sa... [more]
NOS2_BOVIN1.338e-2938.57Nitric oxide synthase, inducible OS=Bos taurus GN=... [more]
NOS3_MOUSE2.282e-2936.60Nitric oxide synthase, endothelial OS=Mus musculus... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-E10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659476 ID=EY659476; Name=EY659476; organism=Citrus sinensis; type=EST; length=957bp
TGGTNACAACTCCCAGCTCCGGTNCCGGNATTACCGCCTCGACCCACGCG
TCCGGGCATTTTTATTATTAGGCCTATCACCAGACACCTATTTTTCCCTT
CATACTGATAAAGAGGATGGCACACCAGTTGGTAAAAGCACCTTGCCTCC
CACTTTCCCACCGTGCTCTTTAAGAACAGCATTAACTAAATATGCTGATC
TTTTGAGCTCCCCAAAGAAGTCTGCATTACTTGCCTTAGCAGCTCATGCA
TCTGACCCCACTGAAGCTGATCGGTTAAGACATCTTGCATCACCTGCTGG
AAAGGATGAATATGCACAATGGATTGTTGCAAGTCAGAGAAGCCTTCTGG
AGGTCATGAGTGAATTTCCTTCTGCCAAGCCCCCACTTGGTGTCTTTTTT
GCAGCAATTGTCCCACGTTTGCAACCAAGATATTATTCAATTTCATCTTC
TCCAAGGGTTGCACCATCTAGAATTCATGTTACCTGTGCTCTGGTTTATG
AGAAAACACCAACAGGACGTGTTCACAAAGGATTGTGCTCCACTTGGATG
AAGAATTCTTTGCCAATGGAGAAAAGCAATGACTGCAGCTGGGCACCCAT
TTTTGTTAGGCAATCAAACTTCAAACTCCCTGCAGATGCGAAAGTGCCTA
TCATTATGATTGGCCCTGGCACTGGATTAGCTCCTTTCAGGGGTTTCCTA
CAGGAAAGGTTTGCTCTGCANGAAGCTGGAGCAGAACTGGGACCCTCTCT
ATTATTTTTCGGATGCAGGAACCCGTAGATGGATACATTTATGAGGATGA
GCTCNNACACTTTGTTCAAAGTGTGCACTTTCACAGTTGATTGTTGCCTC
TCACGTGAGGGACCCACCAGGAGTATGTGCAGCATAAATGATGGAGAAGT
CTTCGGATATCTGGACATGCTTTCTGAGGAGCTTACTGTTTGTTTGTGTG
ATGCCAA
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