EY659476

Overview
NameEY659476
Unique NameEY659476
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length957
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12645 contig Csv1_Contig12645:151..1108. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY659476 vs. ExPASy Swiss-Prot
Match: CYSJ_NEIMB (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Neisseria meningitidis serogroup B GN=cysJ1 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.244e-11
Identity = 47/141 (33.33%), Postives = 74/141 (52.48%), Query Frame = 2 
Query:  344 LLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFV-RQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALXEAGAELGPSLLFFG 763
            +++V+  FP++       F  ++  L PR YSISS+       +H+T  +V  +      H+G   T   +    ++  +     +FV R   F+LP D++ PI+MIG GTG+APFR F+Q+R A     AE G + L FG
Sbjct:  365 IVDVLHRFPASLT--AEQFIRLLRPLAPRLYSISSAQAEVGDEVHLTVGVVRFE------HEGRARTGGASGFLADRLEEDGTVRVFVERNDGFRLPEDSRKPIVMIGSGTGVAPFRAFVQQRAA---ENAE-GKNWLIFG 493
[Close]
BLAST of EY659476 vs. ExPASy Swiss-Prot
Match: CYSJ_NEIM0 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Neisseria meningitidis serogroup C (strain 053442) GN=cysJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.155e-11
Identity = 48/123 (39.02%), Postives = 67/123 (54.47%), Query Frame = 2 
Query:  398 FAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFV-RQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALXEAGAELGPSLLFFG 763
            FA ++  L PR YSISSS       +H+T   V  +   GR   G  S ++ + L  + +       +FV R   F+LP D++ PI+MIG GTG+APFR F+Q+R A     AE G + L FG
Sbjct:  381 FAGLLRPLAPRLYSISSSQAEVGDEVHLTVGAVRFEHE-GRARVGGASGFLADRLEEDGT-----VRVFVERNDGFRLPEDSRKPIVMIGSGTGVAPFRAFVQQRAA---ENAE-GKNWLIFG 493
The following BLAST results are available for this feature:
BLAST of EY659476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 122
Match NameE-valueIdentityDescription
CYSJ_NEIMB6.244e-1133.33Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_NEIM08.155e-1139.02Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-E10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659476 ID=EY659476; Name=EY659476; organism=Citrus sinensis; type=EST; length=957bp
TGGTNACAACTCCCAGCTCCGGTNCCGGNATTACCGCCTCGACCCACGCG
TCCGGGCATTTTTATTATTAGGCCTATCACCAGACACCTATTTTTCCCTT
CATACTGATAAAGAGGATGGCACACCAGTTGGTAAAAGCACCTTGCCTCC
CACTTTCCCACCGTGCTCTTTAAGAACAGCATTAACTAAATATGCTGATC
TTTTGAGCTCCCCAAAGAAGTCTGCATTACTTGCCTTAGCAGCTCATGCA
TCTGACCCCACTGAAGCTGATCGGTTAAGACATCTTGCATCACCTGCTGG
AAAGGATGAATATGCACAATGGATTGTTGCAAGTCAGAGAAGCCTTCTGG
AGGTCATGAGTGAATTTCCTTCTGCCAAGCCCCCACTTGGTGTCTTTTTT
GCAGCAATTGTCCCACGTTTGCAACCAAGATATTATTCAATTTCATCTTC
TCCAAGGGTTGCACCATCTAGAATTCATGTTACCTGTGCTCTGGTTTATG
AGAAAACACCAACAGGACGTGTTCACAAAGGATTGTGCTCCACTTGGATG
AAGAATTCTTTGCCAATGGAGAAAAGCAATGACTGCAGCTGGGCACCCAT
TTTTGTTAGGCAATCAAACTTCAAACTCCCTGCAGATGCGAAAGTGCCTA
TCATTATGATTGGCCCTGGCACTGGATTAGCTCCTTTCAGGGGTTTCCTA
CAGGAAAGGTTTGCTCTGCANGAAGCTGGAGCAGAACTGGGACCCTCTCT
ATTATTTTTCGGATGCAGGAACCCGTAGATGGATACATTTATGAGGATGA
GCTCNNACACTTTGTTCAAAGTGTGCACTTTCACAGTTGATTGTTGCCTC
TCACGTGAGGGACCCACCAGGAGTATGTGCAGCATAAATGATGGAGAAGT
CTTCGGATATCTGGACATGCTTTCTGAGGAGCTTACTGTTTGTTTGTGTG
ATGCCAA
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