EY659476

Overview
NameEY659476
Unique NameEY659476
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length957
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12645 contig Csv1_Contig12645:151..1108. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659476 vs. ExPASy Swiss-Prot
Match: NOS_LYMST (Nitric oxide synthase OS=Lymnaea stagnalis GN=NOS PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.598e-25
Identity = 78/221 (35.29%), Postives = 109/221 (49.32%), Query Frame = 2
Query:   71 GLSPDTYFSLHTDKEDGTPVGKSTLPPTFPPCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGR--VHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALXE 724
            G SPD         + GT     T     P C+ RTA +                         +  +L  LAS    + Y +W +    ++LE++ EFPS K P  +    + P LQPRYYSISSS +  P+ +H T A+V  KT  G   VH+G+CS+W+  S P+      +  P F+R + +F LP D  +PIIMIGPG+G+APFR F Q+R    E
Sbjct:  726 GPSPDQVVKTEISTQLGT---NDTWRSHLPICTSRTAFSFLLDVTTPPSQEILQVLATQASSDMDKHKLEQLAS--NSEAYEKWRLDLSPNILEILDEFPSLKIPPSLLLTQL-PLLQPRYYSISSSQQKNPNEVHATIAVVRFKTQDGDGPVHEGVCSSWLNRS-PIG-----TVVPCFLRSAPHFHLPEDPSLPIIMIGPGSGIAPFRSFWQQRLGEIE 934          
BLAST of EY659476 vs. ExPASy Swiss-Prot
Match: NDOR1_MOUSE (NADPH-dependent diflavin oxidoreductase 1 OS=Mus musculus GN=Ndor1 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.296e-24
Identity = 81/269 (30.11%), Postives = 130/269 (48.33%), Query Frame = 2
Query:   65 LLGLSPDTYFSLHTDKEDGTPVGKSTLPPTFP-PCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFP---SAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALXEAGAELGPSLLFFGCRNP*MDTFMRMSSXTLFKVCTFTVDCCLSRE 859
            +L L P+ +F+L   +E G P      PP  P PC++   +++Y                       E ++L  L+S  G++E  ++    +R++LEV+ +FP    A PP   +   ++PR++PR +SI+SS    P R+ +  A+V  +T       GLCS+W+ +  P +        P++VR  +   P     PIIM+G GTG+APFR  +QER A  + G     + LFFGCR    D + +     L +    T+    SRE
Sbjct:  265 VLCLDPNQFFTLKP-REPGVPD-----PPGLPQPCTVWNLVSQYLDIASVPRRSFFELLACLSQHALEREKLLELSSARGQEELWEYCSRPRRTILEVLCDFPHTAGAIPP--DYLLDLIPRIRPRAFSIASSLLAHPRRLQILVAVVKYQTRLKEPRHGLCSSWLASLNPGQAGP--VRVPLWVRPGSLVFPKTPDTPIIMVGAGTGVAPFRAAIQERVAHGQTG-----NFLFFGCRQRDQDFYWQTEWQKLEQKGWLTLVTAFSRE 518          
BLAST of EY659476 vs. ExPASy Swiss-Prot
Match: NOS_DROME (Nitric oxide synthase OS=Drosophila melanogaster GN=Nos PE=1 SV=3)

HSP 1 Score: 112.849 bits (281), Expect = 2.887e-24
Identity = 86/246 (34.96%), Postives = 121/246 (49.19%), Query Frame = 2
Query:   77 SPDTYFSLHTDKEDGTPVG--KSTLP-PTFPPCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHK--GLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALXEAG--AELGPSLLFFGCRNP*MDTF 790
            +PD    L   KE  T  G  K   P    PP +LR  L ++                       + +RL  L + +    Y  W       LL+V+ EFPS +PP  +  A + P LQPR+YSISSSPR     IH+T A+V  +   G+  +  G+CS ++       +++D  +  +FVR +  F LP+D   PII+IGPGTG+APFR F QE   L +    A+L    LFFGCRN  +D +
Sbjct:  986 NPDEVLQLQLLKEKQTSNGIFKCWEPHDKIPPDTLRNLLARFFDLTTPPSRQLLTLLAGFCEDTADKERLELLVNDSSA--YEDWRHWRLPHLLDVLEEFPSCRPPAPLLLAQLTP-LQPRFYSISSSPRRVSDEIHLTVAIVKYRCEDGQGDERYGVCSNYLSGL----RADDELF--MFVRSALGFHLPSDRSRPIILIGPGTGIAPFRSFWQEFQVLSDLDPTAKLPKMWLFFGCRNRDVDLY 1222          
BLAST of EY659476 vs. ExPASy Swiss-Prot
Match: CYPD_BACSU (Probable bifunctional P-450/NADPH-P450 reductase 1 OS=Bacillus subtilis GN=cypD PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.925e-24
Identity = 66/166 (39.76%), Postives = 96/166 (57.83%), Query Frame = 2
Query:  278 RHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGR-VHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALXEAGAELGPSLLFFGCRN 772
            R L   + +  Y + I+  + S+L+++ ++ +   P   F   + P L+PRYYSISSSPRV P +  +T  +V     +GR  ++G+ S    N L   ++ D     I   +S F+LP D + PIIM+GPGTG+APFRGFLQ R  L   G  LG + L+FGCRN
Sbjct:  791 RELEELSAEGVYQEQILKKRISMLDLLEKYEACDMPFERFLELLRP-LKPRYYSISSSPRVNPRQASITVGVVRGPAWSGRGEYRGVAS----NDLAERQAGDDVVMFIRTPESRFQLPKDPETPIIMVGPGTGVAPFRGFLQARDVLKREGKTLGEAHLYFGCRN 951          
BLAST of EY659476 vs. ExPASy Swiss-Prot
Match: C505_FUSOX (Bifunctional P-450:NADPH-P450 reductase OS=Fusarium oxysporum GN=CYP505 PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 5.445e-23
Identity = 69/178 (38.76%), Postives = 108/178 (60.67%), Query Frame = 2
Query:  263 EADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRV-HKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSN--FKLPADA-KVPIIMIGPGTGLAPFRGFLQERFALXEAGAELGPSLLFFGCRNP*MD 784
            + D ++ L   AG D Y   I   + S+L+++ +FP+   P+  + A ++P ++ R YSISSSP   PS++ +T +L+   + +G+  H G+ + ++ +    +K +      + VR S+  F LP+DA K PII +  GTGLAP RGF+QER A+  AG  L P+LLFFGCRNP +D
Sbjct:  787 DKDTIQELERLAG-DAYQAEISPKRVSVLDLLEKFPAVALPISSYLA-MLPPMRVRQYSISSSPFADPSKLTLTYSLLDAPSLSGQGRHVGVATNFLSHLTAGDKLH------VSVRASSEAFHLPSDAEKTPIICVAAGTGLAPLRGFIQERAAMLAAGRTLAPALLFFGCRNPEID 956          
BLAST of EY659476 vs. ExPASy Swiss-Prot
Match: NCPR_CANMA (NADPH--cytochrome P450 reductase OS=Candida maltosa GN=NCP1 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.584e-22
Identity = 71/215 (33.02%), Postives = 105/215 (48.84%), Query Frame = 2
Query:  302 KDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAI---VPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKN------------------SLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALXEAGAELGPSLLFFGCRNP*MDTFMRMSSXTLFKVC--TFTVDCCLSREGPTRSM 877
            K E+A  I   + ++ + +    + +P   V F  I   VP LQPRYYSISSS       I++T  +  E+   GR   G+ +  +KN                  S P  K N     P+ VR+SNFKLP +   P+I+IGPGTG+AP RGF++ER    + G  +G ++LF+GCRN   D   +        V    F +    SR+ P++ +
Sbjct:  394 KQEFANKITRKKLNVADALLFASNGRPWSDVPFEFIIENVPHLQPRYYSISSSSLSEKQTINITAVVEVEEEADGRAVTGVVTNLLKNIEIEQNKTGEKPVVHYDLSGPRNKFNKFK-LPVHVRRSNFKLPKNTTTPVILIGPGTGVAPLRGFVRERVQQVKNGVNVGKTVLFYGCRNEHDDFLYKQEWSEYASVLGENFEMFTAFSRQDPSKKV 607          
BLAST of EY659476 vs. ExPASy Swiss-Prot
Match: NCPR_ASPNG (NADPH--cytochrome P450 reductase OS=Aspergillus niger GN=cprA PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.069e-22
Identity = 71/198 (35.86%), Postives = 101/198 (51.01%), Query Frame = 2
Query:  347 LEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVH--KGLCSTWM------KNSLPMEKSN-------------DCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALXEAGAELGPSLLFFGCRNP*MDTFMRMSSXTLFKVC--TFTVDCCLSREGPTR 871
            L+ ++  P +  P  +    I  +LQPRYYSISSS  V   +I +T  +   + P G  H  KG+ + ++      +N   + + +             D    P+ VR SNFKLP+D   PIIM+GPGTG+APFRGF+QER AL   G ++GP++LFFGCR    D   +    T          +    SREGP +
Sbjct:  423 LQSITSKPFSAVPFSLLIEGIT-KLQPRYYSISSSSLVQKDKISITAVVESVRLP-GASHMVKGVTTNYLLALKQKQNGRSLSRPSRLDLLHHGPRNKYDGIHVPVHVRHSNFKLPSDPSRPIIMVGPGTGVAPFRGFIQERAALAAKGEKVGPTVLFFGCRKSDEDFLYKDEWKTYQDQLGDNLKIITAFSREGPQK 618          
BLAST of EY659476 vs. ExPASy Swiss-Prot
Match: MTRR_HUMAN (Methionine synthase reductase, mitochondrial OS=Homo sapiens GN=MTRR PE=1 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 4.609e-22
Identity = 85/262 (32.44%), Postives = 119/262 (45.42%), Query Frame = 2
Query:  137 STLPPTFPP-CSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALV-YEKTPTGRV-HKGLCSTWMK---------NSLPMEKSNDCSWAP---IFVRQSN-FKLPADAKVPIIMIGPGTGLAPFRGFLQERFALXE--AGAELGPSLLFFGCRNP*MDTFMRMSSXTLFKVCTFT-VDCCLSREGP 865
            +TLP   P  CSL+   T                         E  RL+ L S  G  +Y++++  +   LL+++  FPS +PPL +    + P+LQPR YS +SS    P ++H    +V +  T T  V  KG+C+ W+          N     + +  + AP   I  R +N F LP D  +PIIM+GPGTG+APF GFLQ R  L E       G   LFFGCR+   D   R       K    T +    SR+ P
Sbjct:  381 ATLPQHIPAGCSLQFIFTWCLEIRAIPKKAFLRALVDYTSDSAEKRRLQELCSKQGAADYSRFVRDACACLLDLLLAFPSCQPPLSLLLEHL-PKLQPRPYSCASSSLFHPGKLHFVFNIVEFLSTATTEVLRKGVCTGWLALLVASVLQPNIHASHEDSGKALAPKISISPRTTNSFHLPDDPSIPIIMVGPGTGIAPFIGFLQHREKLQEQHPDGNFGAMWLFFGCRHKDRDYLFRKELRHFLKHGILTHLKVSFSRDAP 641          
BLAST of EY659476 vs. ExPASy Swiss-Prot
Match: NCPR_PHACH (NADPH--cytochrome P450 reductase OS=Phanerochaete chrysosporium GN=CPR PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.288e-21
Identity = 78/236 (33.05%), Postives = 106/236 (44.92%), Query Frame = 2
Query:  377 KPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALV-YEKTPTGRV--------------------HKGLCSTWMKNSLPME-------------------KSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFAL---------XEAGAELGPSLLFFGCRNP*MDTFMRMSSXTLFKVC--TFTVDCCLSREGPTRSMCSINDGEVFGYLDMLSEE 931
            K P  +  ++I PRLQPRYYSISSSP++ P+ IH T  ++ Y+     RV                    H    +T + +  P E                   K  D    PI VR+S F+LP + K P+IMIGPGTG+APFRGF+QER A+          E  A+ GP  L++GCR    D   +       K     F + C  SRE P +      DG      D++ E+
Sbjct:  440 KIPFDIIVSSI-PRLQPRYYSISSSPKLYPNAIHATVVVLKYKSEKAPRVEERWIYGVGSNFLLNLKYASHHDKAATLVSDDSPSEPSIVSHYPTYSIEGPRGAYKQGDVVKVPIHVRRSTFRLPTNPKSPVIMIGPGTGVAPFRGFVQERVAMARRTIEKHGPEGLADWGPIRLYYGCRRSDQDFLYKDEWPEYAKELHGKFIMRCAFSREPPYKP-----DGSKIYVQDLIWED 669          
BLAST of EY659476 vs. ExPASy Swiss-Prot
Match: NCPR_CANTR (NADPH--cytochrome P450 reductase OS=Candida tropicalis GN=NCP1 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.483e-20
Identity = 65/214 (30.37%), Postives = 105/214 (49.07%), Query Frame = 2
Query:  302 KDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQ---PRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKN-SLPMEKSNDCSWA----------------PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALXEAGAELGPSLLFFGCRNP*MDTFMRMSSXTLFKVC--TFTVDCCLSREGPTRSM 877
            K E+A  +   + ++ + +    + +P   V F  ++  +Q   PRYYSISSS       I+VT  +  E+   GR   G+ +  +KN  +   K+ +                    P+ VR+SNFKLP ++  P+I+IGPGTG+AP RGF++ER    + G  +G ++LF+GCRN   D   +        V    F +    SR+ PT+ +
Sbjct:  394 KQEFASKVTRRKFNIADALLFASNNRPWSDVPFEFLIENVQHLTPRYYSISSSSLSEKQTINVTAVVEAEEEADGRPVTGVVTNLLKNIEIEQNKTGETPMVHYDLNGPRGKFSKFRLPVHVRRSNFKLPKNSTTPVILIGPGTGVAPLRGFVRERVQQVKNGVNVGKTVLFYGCRNSEQDFLYKQEWSEYASVLGENFEMFNAFSRQDPTKKV 607          
The following BLAST results are available for this feature:
BLAST of EY659476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 122
Match NameE-valueIdentityDescription
NOS_LYMST7.598e-2535.29Nitric oxide synthase OS=Lymnaea stagnalis GN=NOS ... [more]
NDOR1_MOUSE1.296e-2430.11NADPH-dependent diflavin oxidoreductase 1 OS=Mus m... [more]
NOS_DROME2.887e-2434.96Nitric oxide synthase OS=Drosophila melanogaster G... [more]
CYPD_BACSU4.925e-2439.76Probable bifunctional P-450/NADPH-P450 reductase 1... [more]
C505_FUSOX5.445e-2338.76Bifunctional P-450:NADPH-P450 reductase OS=Fusariu... [more]
NCPR_CANMA1.584e-2233.02NADPH--cytochrome P450 reductase OS=Candida maltos... [more]
NCPR_ASPNG2.069e-2235.86NADPH--cytochrome P450 reductase OS=Aspergillus ni... [more]
MTRR_HUMAN4.609e-2232.44Methionine synthase reductase, mitochondrial OS=Ho... [more]
NCPR_PHACH2.288e-2133.05NADPH--cytochrome P450 reductase OS=Phanerochaete ... [more]
NCPR_CANTR1.483e-2030.37NADPH--cytochrome P450 reductase OS=Candida tropic... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-E10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659476 ID=EY659476; Name=EY659476; organism=Citrus sinensis; type=EST; length=957bp
TGGTNACAACTCCCAGCTCCGGTNCCGGNATTACCGCCTCGACCCACGCG
TCCGGGCATTTTTATTATTAGGCCTATCACCAGACACCTATTTTTCCCTT
CATACTGATAAAGAGGATGGCACACCAGTTGGTAAAAGCACCTTGCCTCC
CACTTTCCCACCGTGCTCTTTAAGAACAGCATTAACTAAATATGCTGATC
TTTTGAGCTCCCCAAAGAAGTCTGCATTACTTGCCTTAGCAGCTCATGCA
TCTGACCCCACTGAAGCTGATCGGTTAAGACATCTTGCATCACCTGCTGG
AAAGGATGAATATGCACAATGGATTGTTGCAAGTCAGAGAAGCCTTCTGG
AGGTCATGAGTGAATTTCCTTCTGCCAAGCCCCCACTTGGTGTCTTTTTT
GCAGCAATTGTCCCACGTTTGCAACCAAGATATTATTCAATTTCATCTTC
TCCAAGGGTTGCACCATCTAGAATTCATGTTACCTGTGCTCTGGTTTATG
AGAAAACACCAACAGGACGTGTTCACAAAGGATTGTGCTCCACTTGGATG
AAGAATTCTTTGCCAATGGAGAAAAGCAATGACTGCAGCTGGGCACCCAT
TTTTGTTAGGCAATCAAACTTCAAACTCCCTGCAGATGCGAAAGTGCCTA
TCATTATGATTGGCCCTGGCACTGGATTAGCTCCTTTCAGGGGTTTCCTA
CAGGAAAGGTTTGCTCTGCANGAAGCTGGAGCAGAACTGGGACCCTCTCT
ATTATTTTTCGGATGCAGGAACCCGTAGATGGATACATTTATGAGGATGA
GCTCNNACACTTTGTTCAAAGTGTGCACTTTCACAGTTGATTGTTGCCTC
TCACGTGAGGGACCCACCAGGAGTATGTGCAGCATAAATGATGGAGAAGT
CTTCGGATATCTGGACATGCTTTCTGAGGAGCTTACTGTTTGTTTGTGTG
ATGCCAA
back to top