EY659476

Overview
NameEY659476
Unique NameEY659476
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length957
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12645 contig Csv1_Contig12645:151..1108. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659476 vs. ExPASy Swiss-Prot
Match: CYSJ_YERP3 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=cysJ PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.138e-12
Identity = 44/116 (37.93%), Postives = 65/116 (56.03%), Query Frame = 2
Query:  419 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALXEAGAELGPSLLFFG 763
            L PR YSI+SS     + +H+T  +V      GR   G  S ++ + L ++         +F+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R    E     G + LFFG
Sbjct:  396 LTPRLYSIASSQAETENEVHITVGVVRYDID-GRARSGGASGYLADRLEVDGD-----IRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQR----EVDGASGKNWLFFG 501          
BLAST of EY659476 vs. ExPASy Swiss-Prot
Match: CYSJ_VIBCH (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Vibrio cholerae GN=cysJ PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.138e-12
Identity = 56/172 (32.56%), Postives = 89/172 (51.74%), Query Frame = 2
Query:  263 EADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFV---RQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALXEAGAELGPSLLFFGCR 769
            ++++L  LA    +D+ A    A++  +++V+ E       + +   +++ RL PR YSI+SS       +H+T  +V E    G    G  S+++ + L          AP+ V     +NFKLP+D   P+IM+GPGTG+APFR F+QER    E     G + L FG R
Sbjct:  352 QSEKLTSLA----QDKEALREYATRTQVIDVLREEKVTLSAIQLL--SLLRRLTPRLYSIASSQSEVGEEVHLTVGVV-EYEYEGEQRLGGASSFLAHQLE-------EGAPVKVFVEHNNNFKLPSDDNAPLIMVGPGTGIAPFRSFIQER----ENRGAAGKNWLLFGDR 505          
BLAST of EY659476 vs. ExPASy Swiss-Prot
Match: CYSJ_VIBC3 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=cysJ PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.138e-12
Identity = 56/172 (32.56%), Postives = 89/172 (51.74%), Query Frame = 2
Query:  263 EADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFV---RQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALXEAGAELGPSLLFFGCR 769
            ++++L  LA    +D+ A    A++  +++V+ E       + +   +++ RL PR YSI+SS       +H+T  +V E    G    G  S+++ + L          AP+ V     +NFKLP+D   P+IM+GPGTG+APFR F+QER    E     G + L FG R
Sbjct:  352 QSEKLTSLA----QDKEALREYATRTQVIDVLREEKVTLSAIQLL--SLLRRLTPRLYSIASSQSEVGEEVHLTVGVV-EYEYKGEQRLGGASSFLAHQLE-------EGAPVKVFVEHNNNFKLPSDDNAPLIMVGPGTGIAPFRSFIQER----ENRGAAGKNWLLFGDR 505          
BLAST of EY659476 vs. ExPASy Swiss-Prot
Match: CYSJ_SALTY (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Salmonella typhimurium GN=cysJ PE=3 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.486e-12
Identity = 46/116 (39.66%), Postives = 67/116 (57.76%), Query Frame = 2
Query:  419 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALXEAGAELGPSLLFFG 763
            L PR YSI+S+     S +H+T  +V      GR   G  S+++ + +  E         +F+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R A    G E G + LFFG
Sbjct:  383 LTPRLYSIASAQAEVESEVHITVGVVRYDIE-GRARAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRSFMQQRAA---EGVE-GKNWLFFG 488          
BLAST of EY659476 vs. ExPASy Swiss-Prot
Match: CYSJ_SALPB (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=cysJ PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.486e-12
Identity = 46/116 (39.66%), Postives = 67/116 (57.76%), Query Frame = 2
Query:  419 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALXEAGAELGPSLLFFG 763
            L PR YSI+S+     S +H+T  +V      GR   G  S+++ + +  E         +F+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R A    G E G + LFFG
Sbjct:  383 LTPRLYSIASAQAEVESEVHITVGVVCYDIE-GRARAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAA---EGVE-GKNWLFFG 488          
BLAST of EY659476 vs. ExPASy Swiss-Prot
Match: CYSJ_ECO57 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Escherichia coli O157:H7 GN=cysJ PE=3 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 1.486e-12
Identity = 47/116 (40.52%), Postives = 67/116 (57.76%), Query Frame = 2
Query:  419 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALXEAGAELGPSLLFFG 763
            L PR YSI+SS     + +HVT  +V      GR   G  S+++ + +  E         +F+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R A  EA    G + LFFG
Sbjct:  383 LTPRLYSIASSQEEVENEVHVTVGVVRYDVE-GRARAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQR-AADEAP---GKNWLFFG 488          
BLAST of EY659476 vs. ExPASy Swiss-Prot
Match: CYSJ_CITK8 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=cysJ PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.486e-12
Identity = 47/116 (40.52%), Postives = 67/116 (57.76%), Query Frame = 2
Query:  419 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALXEAGAELGPSLLFFG 763
            L PR YSI+SS     S +H+T   V  +   GR   G  S+++ + +  E         +F+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R A  EA    G + LFFG
Sbjct:  385 LTPRLYSIASSQAEVESEVHITVGAVRYEIE-GRARAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQR-AADEAP---GKNWLFFG 490          
BLAST of EY659476 vs. ExPASy Swiss-Prot
Match: TAH18_CANAL (Probable NADPH reductase TAH18 OS=Candida albicans GN=TAH18 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.941e-12
Identity = 50/169 (29.59%), Postives = 85/169 (50.30%), Query Frame = 2
Query:  263 EADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALXEAGAELGPSLLFFGCR 769
            E  +L+   S    +E   +    +RS+LE + EF +       +   + P ++PR +SI+S P  +   + +  A+V  KT   ++ +G+C+ W+KN  P ++          +++S+FK   D   PIIM+ PGTG+AP +  + E      +  EL    LFFGCR
Sbjct:  325 EQAKLKEFGSLDEPEELYDYANRPRRSILETLLEFENNLTIPVSYILDLFPLIRPRMFSIASCP--SSKEVELVVAIVEYKTIIRKIRRGVCTRWLKNLKPGDQFL------FSIQRSSFKYKDDNS-PIIMVAPGTGIAPMKSLIDE-VIQNNSKQEL---YLFFGCR 480          
BLAST of EY659476 vs. ExPASy Swiss-Prot
Match: CYSJ_SHISS (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Shigella sonnei (strain Ss046) GN=cysJ PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.941e-12
Identity = 47/116 (40.52%), Postives = 67/116 (57.76%), Query Frame = 2
Query:  419 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALXEAGAELGPSLLFFG 763
            L PR YSI+SS     + +HVT  +V      GR   G  S+++ + +  E         +F+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R A  EA    G + LFFG
Sbjct:  383 LTPRLYSIASSQAEVENEVHVTVGVVRYDVE-GRARAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPANPQTPVIMIGPGTGIAPFRAFMQQR-AADEAP---GKNWLFFG 488          
BLAST of EY659476 vs. ExPASy Swiss-Prot
Match: CYSJ_SHIFL (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Shigella flexneri GN=cysJ PE=3 SV=3)

HSP 1 Score: 73.559 bits (179), Expect = 1.941e-12
Identity = 47/116 (40.52%), Postives = 67/116 (57.76%), Query Frame = 2
Query:  419 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALXEAGAELGPSLLFFG 763
            L PR YSI+SS     + +HVT  +V      GR   G  S+++ + +  E         +F+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R A  EA    G + LFFG
Sbjct:  383 LTPRLYSIASSQAEVENEVHVTVGVVRYDVE-GRARAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPANLETPVIMIGPGTGIAPFRAFMQQR-AADEAP---GKNWLFFG 488          
The following BLAST results are available for this feature:
BLAST of EY659476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 122
Match NameE-valueIdentityDescription
CYSJ_YERP31.138e-1237.93Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_VIBCH1.138e-1232.56Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_VIBC31.138e-1232.56Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SALTY1.486e-1239.66Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SALPB1.486e-1239.66Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_ECO571.486e-1240.52Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_CITK81.486e-1240.52Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
TAH18_CANAL1.941e-1229.59Probable NADPH reductase TAH18 OS=Candida albicans... [more]
CYSJ_SHISS1.941e-1240.52Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SHIFL1.941e-1240.52Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-E10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659476 ID=EY659476; Name=EY659476; organism=Citrus sinensis; type=EST; length=957bp
TGGTNACAACTCCCAGCTCCGGTNCCGGNATTACCGCCTCGACCCACGCG
TCCGGGCATTTTTATTATTAGGCCTATCACCAGACACCTATTTTTCCCTT
CATACTGATAAAGAGGATGGCACACCAGTTGGTAAAAGCACCTTGCCTCC
CACTTTCCCACCGTGCTCTTTAAGAACAGCATTAACTAAATATGCTGATC
TTTTGAGCTCCCCAAAGAAGTCTGCATTACTTGCCTTAGCAGCTCATGCA
TCTGACCCCACTGAAGCTGATCGGTTAAGACATCTTGCATCACCTGCTGG
AAAGGATGAATATGCACAATGGATTGTTGCAAGTCAGAGAAGCCTTCTGG
AGGTCATGAGTGAATTTCCTTCTGCCAAGCCCCCACTTGGTGTCTTTTTT
GCAGCAATTGTCCCACGTTTGCAACCAAGATATTATTCAATTTCATCTTC
TCCAAGGGTTGCACCATCTAGAATTCATGTTACCTGTGCTCTGGTTTATG
AGAAAACACCAACAGGACGTGTTCACAAAGGATTGTGCTCCACTTGGATG
AAGAATTCTTTGCCAATGGAGAAAAGCAATGACTGCAGCTGGGCACCCAT
TTTTGTTAGGCAATCAAACTTCAAACTCCCTGCAGATGCGAAAGTGCCTA
TCATTATGATTGGCCCTGGCACTGGATTAGCTCCTTTCAGGGGTTTCCTA
CAGGAAAGGTTTGCTCTGCANGAAGCTGGAGCAGAACTGGGACCCTCTCT
ATTATTTTTCGGATGCAGGAACCCGTAGATGGATACATTTATGAGGATGA
GCTCNNACACTTTGTTCAAAGTGTGCACTTTCACAGTTGATTGTTGCCTC
TCACGTGAGGGACCCACCAGGAGTATGTGCAGCATAAATGATGGAGAAGT
CTTCGGATATCTGGACATGCTTTCTGAGGAGCTTACTGTTTGTTTGTGTG
ATGCCAA
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