EY659475
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBA3E_HUMAN (Tubulin alpha-3E chain OS=Homo sapiens GN=TUBA3E PE=1 SV=2) HSP 1 Score: 232.646 bits (592), Expect = 1.296e-60 Identity = 107/121 (88.43%), Postives = 117/121 (96.69%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKD 365 KYMACC++YRGDVVPKDVNAA+ATIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+ HKFDLMYAK AFVHWYVGEGMEEGEFSEAREDLAALEKD Sbjct: 311 KYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLVHKFDLMYAKWAFVHWYVGEGMEEGEFSEAREDLAALEKD 431
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBAN_GUITH (Tubulin alpha chain, nucleomorph OS=Guillardia theta GN=tubA PE=3 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 1.692e-60 Identity = 106/122 (86.89%), Postives = 116/122 (95.08%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 368 KYMACCLM+RGDV PKDVN +VA IKTK+TIQFVDWCPTGFKCGINYQPPTVVP GDLAKV RAVCMISNST+++EVFSRI+ KFDLMY+KRAFVHWYVGEGMEEGEF+EARED+AALEKDY Sbjct: 311 KYMACCLMFRGDVAPKDVNGSVAAIKTKKTIQFVDWCPTGFKCGINYQPPTVVPDGDLAKVDRAVCMISNSTAISEVFSRINKKFDLMYSKRAFVHWYVGEGMEEGEFNEAREDMAALEKDY 432
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBA2_CAEEL (Tubulin alpha-2 chain OS=Caenorhabditis elegans GN=tba-2 PE=2 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 4.924e-60 Identity = 106/122 (86.89%), Postives = 116/122 (95.08%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 368 KYMA CL+YRGDVVPKDVN A+A IKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKV RAVCM+SN+T++AE +SR+D+KFDLMYAKRAFVHWYVGEGMEEGEF+EAREDLAALEKDY Sbjct: 309 KYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDY 430
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBA4_CHICK (Tubulin alpha-4 chain (Fragment) OS=Gallus gallus PE=3 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 1.871e-59 Identity = 103/122 (84.43%), Postives = 115/122 (94.26%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 368 KYMACC++YRGDVVPKDVN A+A IKTKR IQFVDWCPTG K GINYQPPTVVPGGDLA+VQRAVCM+SN+T++AE ++R+DHKFDLMYAKRAFVHWYV EGMEEGEF+EAREDLAALEKDY Sbjct: 186 KYMACCMLYRGDVVPKDVNVAIAAIKTKRNIQFVDWCPTGVKVGINYQPPTVVPGGDLAQVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVSEGMEEGEFAEAREDLAALEKDY 307
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBA2_HOMAM (Tubulin alpha-2 chain OS=Homarus americanus PE=2 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 4.608e-58 Identity = 101/122 (82.79%), Postives = 113/122 (92.62%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 368 KYMACCL+YRGDVVPKDV A++A +KTKRTIQFVDWCPTGFK GINYQPPTVVPG DLAKV RAVCM+SN+T++AE ++R+DHK DLMYAKRAFVHWYVGEGMEE +FSEAREDLA LEKDY Sbjct: 311 KYMACCLLYRGDVVPKDVTASIANVKTKRTIQFVDWCPTGFKVGINYQPPTVVPGADLAKVSRAVCMLSNTTAIAEAWARLDHKVDLMYAKRAFVHWYVGEGMEERQFSEAREDLATLEKDY 432
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBA2_CHICK (Tubulin alpha-2 chain OS=Gallus gallus PE=2 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.027e-57 Identity = 99/122 (81.15%), Postives = 113/122 (92.62%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 368 KYMACC++YRGDVVPKDVN A+A IKT R++QFVDWCPTGFK GINYQPP PGGDLA+VQRAVCM+SN+T++AE ++R+DHKFDLMYAKRAFVHWYV EGMEEGEF+EAREDLAALEKDY Sbjct: 308 KYMACCMLYRGDVVPKDVNVAIAAIKTNRSLQFVDWCPTGFKVGINYQPPIPTPGGDLAQVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVSEGMEEGEFAEAREDLAALEKDY 429
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBA1_PNECA (Tubulin alpha chain OS=Pneumocystis carinii GN=TUB1 PE=3 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 1.483e-56 Identity = 100/122 (81.97%), Postives = 112/122 (91.80%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 368 KYMA CL+YRGD+V KDVN AV++I+TKRTIQFVDWCPTGFK G+ YQPP VP GDLAKV RAVCM+SN+TS+AE +SR+DHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEKDY Sbjct: 311 KYMATCLLYRGDIVTKDVNCAVSSIRTKRTIQFVDWCPTGFKLGVCYQPPQYVPNGDLAKVNRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 432
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBA1_EMENI (Tubulin alpha-1 chain OS=Emericella nidulans GN=tubA PE=3 SV=2) HSP 1 Score: 216.468 bits (550), Expect = 9.609e-56 Identity = 99/122 (81.15%), Postives = 112/122 (91.80%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 368 KYMA CL+YRGDVVPK+ +AAVAT+KTKRTIQFVDWCPTGFK GI YQPP VP GDLAKV RAVCM+SN+T+++E +S +DHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+DY Sbjct: 311 KYMATCLLYRGDVVPKETHAAVATLKTKRTIQFVDWCPTGFKIGICYQPPQQVPNGDLAKVNRAVCMLSNTTAISEAWSALDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDY 432
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBA_MYCGR (Tubulin alpha chain OS=Mycosphaerella graminicola PE=3 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 1.255e-55 Identity = 100/122 (81.97%), Postives = 111/122 (90.98%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 368 KYMA CL+YRGDVVPKDV+ AVAT+KTKRTIQFVDWCPTGFK GI YQPP VP GDLAKV RAVCM+SN+T++AE +S + HKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+DY Sbjct: 311 KYMATCLLYRGDVVPKDVHQAVATLKTKRTIQFVDWCPTGFKIGICYQPPQNVPNGDLAKVNRAVCMLSNTTAIAEAWSALSHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDY 432
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBAL3_MOUSE (Tubulin alpha chain-like 3 OS=Mus musculus GN=Tubal3 PE=2 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 2.796e-55 Identity = 94/122 (77.05%), Postives = 112/122 (91.80%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 368 KYMACCL+YRGDVVPKDVN A+A +K++ ++QFVDWCPTGFK GINYQPP VVPGGDLA+VQRAVCM+SN+T++ E ++R+DHKFDLMYAK+AF+HWY+ EGME GEF EAREDLAALEKDY Sbjct: 318 KYMACCLLYRGDVVPKDVNEAIAAMKSRTSVQFVDWCPTGFKVGINYQPPAVVPGGDLARVQRAVCMLSNTTAIVEAWARLDHKFDLMYAKKAFLHWYITEGMELGEFVEAREDLAALEKDY 439 The following BLAST results are available for this feature:
BLAST of EY659475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 376
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659475 ID=EY659475; Name=EY659475; organism=Citrus sinensis; type=EST; length=644bpback to top |