EY659475
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBA_GLOLA (Tubulin alpha chain OS=Glomerella lagenarium GN=TUB1 PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.347e-41 Identity = 84/127 (66.14%), Postives = 97/127 (76.38%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPG----GDLAKVQRAVCMISNSTSVAEVFSRID-HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 368 KYMA L+YRGD VP+D NAA+A +K K + V+WCPTGFK GINYQ P VP G LA V R+V M+SN+T++ E +S+ KFDLM AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY Sbjct: 311 KYMAVALLYRGDAVPRDCNAAIAALKAKSSFNLVEWCPTGFKLGINYQKPMAVPAAPGDGGLAPVDRSVSMLSNTTAMPEAWSKTGITKFDLMSAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 437
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBA6_NAEGR (Tubulin alpha-6 chain OS=Naegleria gruberi GN=TUBA6 PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.298e-41 Identity = 78/122 (63.93%), Postives = 99/122 (81.15%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 368 KY+A CLMYRGDVV K+V AV +K+K IQFVDW P FK G+N Q PTV+P + A+V+R+ MISN+T++++VF R++ KFDL+YAKRA+VH +V EGMEEGEF+EAREDLAALEKDY Sbjct: 309 KYIASCLMYRGDVVNKEVTDAVKNVKSKANIQFVDWSPCAFKIGVNSQKPTVLPDSEFAQVERSCAMISNNTAISQVFERMNDKFDLLYAKRAYVHHFVSEGMEEGEFAEAREDLAALEKDY 430
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBA1_ENTHI (Tubulin alpha-1 chain OS=Entamoeba histolytica GN=TUB1 PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 2.809e-39 Identity = 71/122 (58.20%), Postives = 91/122 (74.59%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 368 K+M+CC+MYRGDV ++VN AV+ IK + T+ FV WCP FKCGIN QP T VPG A R+ CMI+N T++ +VF +++ FDLM+ KRAFVH YVGEGMEE EF++AR+DL LE DY Sbjct: 317 KFMSCCMMYRGDVSSREVNLAVSGIKKQNTVPFVGWCPCSFKCGINSQPATAVPGSSYASTARSACMIANHTAMCQVFQKVNQNFDLMFGKRAFVHHYVGEGMEENEFTDARQDLYELEVDY 438
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBA_DICPU (Tubulin alpha chain (Fragment) OS=Dictyostelium purpureum GN=tuba PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 4.056e-38 Identity = 73/112 (65.18%), Postives = 92/112 (82.14%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKR--TIQFVDWCPTGFKCGINYQPPTVVPG--GD-LAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGE 323 KYMACCLMYRG++VPK+ AV I+ ++ T+ FVDW PTGFKCGIN PT V G GD +A+ +++VCM+SN+T++++VFSRI+HKFDLMY KRAFVHWYVGEGMEEGE Sbjct: 220 KYMACCLMYRGNIVPKEAQKAVQNIRNEKSKTVSFVDWSPTGFKCGINNSKPTTVLGENGDNMARTEKSVCMLSNTTAISQVFSRINHKFDLMYIKRAFVHWYVGEGMEEGE 331
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBA_ENCHE (Tubulin alpha chain (Fragment) OS=Encephalitozoon hellem GN=TUB1 PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.326e-32 Identity = 60/96 (62.50%), Postives = 79/96 (82.29%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVH 290 KYMACCL++RGDV PKD N A A +K KRT QFV+WCPTGFK GIN + PTV+ G +A+V RAVC +SN+T+++E + R+++KFDLM++KRAFVH Sbjct: 285 KYMACCLLFRGDVNPKDANTATANVKAKRTNQFVEWCPTGFKVGINSRKPTVLDGEAMAEVSRAVCALSNTTAISEAWKRLNNKFDLMFSKRAFVH 380
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBB5_GOSHI (Tubulin beta-5 chain OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.227e-18 Identity = 43/122 (35.25%), Postives = 69/122 (56.56%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 368 +Y+ C M+RG + K+V+ + ++ K + FV+W P K + PP ++ A I NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA D+ L +Y Sbjct: 309 RYLTACAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPK--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESDMNDLVAEY 422
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBB_EIMTE (Tubulin beta chain OS=Eimeria tenella PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.093e-18 Identity = 40/122 (32.79%), Postives = 71/122 (58.20%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 368 +Y+ C ++RG + K+V+ + ++ K + FV+W P K G+ PP ++ +V + NST++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 309 RYLTACALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNMKSGVCDIPPK--------GLKMSVTFVGNSTAIQEMFKRVSDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBB2_TRIVI (Tubulin beta-2 chain OS=Trichoderma viride GN=tub2 PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.093e-18 Identity = 41/122 (33.61%), Postives = 69/122 (56.56%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 368 +Y+ CC ++RG V K+V + ++ K + FV+W P + + PP ++ + I NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 309 RYLTCCSIFRGKVAMKEVEDQMRNVQNKNSTYFVEWIPNNIQTALCAIPPR--------GLKMSSTFIGNSTSIQELFKRVGEQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBB2_TRIVE (Tubulin beta-2 chain OS=Trichoderma virens PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.093e-18 Identity = 41/122 (33.61%), Postives = 69/122 (56.56%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 368 +Y+ CC ++RG V K+V + ++ K + FV+W P + + PP ++ + I NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 309 RYLTCCSIFRGKVAMKEVEDQMRNVQNKNSTYFVEWIPNNIQTALCAIPPR--------GLKMSSTFIGNSTSIQELFKRVGEQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBB1_ARATH (Tubulin beta-1 chain OS=Arabidopsis thaliana GN=TUBB1 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.662e-18 Identity = 41/122 (33.61%), Postives = 69/122 (56.56%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 368 +Y+ M+RG + K+V+ + ++ K + FV+W P K + PPT ++ A + NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 310 RYLTASAMFRGKMSTKEVDEQILNVQNKNSSYFVEWIPNNVKSSVCDIPPT--------GIKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 423 The following BLAST results are available for this feature:
BLAST of EY659475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 376
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659475 ID=EY659475; Name=EY659475; organism=Citrus sinensis; type=EST; length=644bpback to top |