EY659475
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBB5_WHEAT (Tubulin beta-5 chain OS=Triticum aestivum GN=TUBB5 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.959e-16 Identity = 41/122 (33.61%), Postives = 68/122 (55.74%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 368 +Y+ M+RG + K+V+ + ++ K + FV+W P K + + P G + A I NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 309 RYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVC----DIAPRG----LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEY 422
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBB4_OOMCK (Tubulin beta-4 chain OS=Oomycete-like sp. (strain MacKay2000) GN=TUBB4 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.959e-16 Identity = 38/122 (31.15%), Postives = 68/122 (55.74%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 368 +Y+ M+RG + K+V+ + ++ K + FV+W P K + PP ++ + + NST++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 309 RYLTASCMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPPK--------GLKMSATFVGNSTAIQEMFKRVGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBB2_MAIZE (Tubulin beta-2 chain OS=Zea mays GN=TUBB2 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.959e-16 Identity = 39/122 (31.97%), Postives = 67/122 (54.92%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 368 +Y+ M+RG + K+V+ + ++ K + FV+W P K + PP + + + NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 309 RYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPR--------GLSMSSTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBB2_DAUCA (Tubulin beta-2 chain OS=Daucus carota GN=TUBB2 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.959e-16 Identity = 40/122 (32.79%), Postives = 66/122 (54.10%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 368 +Y+ M+RG + K+V+ + ++ K + FV+W P K + PP + + I NSTS+ E+F R+ +F M+ +AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 309 RYLTASAMFRGKMSTKEVDEQILNVQNKNSSYFVEWIPNNVKSSVCDIPPR--------GLSMSSTFIGNSTSIQEMFRRVSEQFTAMFRPKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBB1_GADMO (Tubulin beta-1 chain OS=Gadus morhua PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.959e-16 Identity = 40/122 (32.79%), Postives = 68/122 (55.74%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 368 +Y+ ++RG + K+V+ + ++ K + FV+W P K + PP ++ A I NST++ E+F RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 309 RYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBB1_CYAPA (Tubulin beta-1 chain OS=Cyanophora paradoxa GN=TUBB1 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.959e-16 Identity = 38/122 (31.15%), Postives = 68/122 (55.74%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 368 +Y+ ++RG + K+V+ + ++ K + FV+W P K + PP ++ + I NST++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 309 RYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKASVCDIPPK--------GLKMSATFIGNSTAIQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBB_PORYE (Tubulin beta chain OS=Porphyra yezoensis GN=TUBB1 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.558e-16 Identity = 40/115 (34.78%), Postives = 64/115 (55.65%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 347 +Y+ +RG V K+V + I+TK + QF+DW P K + V P G+ + I NST++ ++F R+ F M+ ++AF+HWY GEGM+E EF+EA ++ Sbjct: 309 RYLTASAYFRGKVSTKEVEEQMDAIQTKNSGQFIDWIPNAIKASVC----DVAPTGETM----SAAFIGNSTAIQDIFKRVGSHFSAMFKRKAFLHWYTGEGMDEMEFTEAESNM 415
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBB_PORPU (Tubulin beta chain OS=Porphyra purpurea GN=TUBB1 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.558e-16 Identity = 40/115 (34.78%), Postives = 64/115 (55.65%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 347 +Y+ +RG V K+V + I+TK + QF+DW P K + V P G+ + I NST++ ++F R+ F M+ ++AF+HWY GEGM+E EF+EA ++ Sbjct: 309 RYLTASAYFRGHVSTKEVEEQMDAIQTKNSGQFIDWIPNAIKASVC----DVAPTGETM----SAAFIGNSTAIQDIFKRVGSHFSAMFKRKAFLHWYTGEGMDEMEFTEAESNM 415
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBB_EUGGR (Tubulin beta chain OS=Euglena gracilis GN=TUBB PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.558e-16 Identity = 38/122 (31.15%), Postives = 68/122 (55.74%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 368 +Y+ M+RG + K+V+ + ++ K + FV+W P K + PP ++ + I N+T++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 306 RYLTASAMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPPK--------GLKMSATFIGNNTAIQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 419
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBB_ERYGR (Tubulin beta chain OS=Erysiphe graminis subsp. hordei GN=TUB2 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.558e-16 Identity = 39/122 (31.97%), Postives = 67/122 (54.92%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 368 +Y+ C ++RG V K+V + ++ K FV+W P + + PP ++ + + NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 309 RYLTCSAIFRGKVSMKEVEDQMRNVQQKNVSYFVEWIPNNVQTALCSIPPR--------GLKMSSTFVGNSTSIQELFKRVGDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422 The following BLAST results are available for this feature:
BLAST of EY659475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 376
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659475 ID=EY659475; Name=EY659475; organism=Citrus sinensis; type=EST; length=644bpback to top |