EY659475
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBB2_ECHMU (Tubulin beta-2 chain OS=Echinococcus multilocularis GN=TUB-2 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 9.721e-16 Identity = 37/122 (30.33%), Postives = 68/122 (55.74%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 368 +Y+ ++RG + K+V+ + ++ K + FV+W P K + PP ++ + + NST++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 309 RYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMSATFVGNSTAIQELFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBB2_DROME (Tubulin beta-2 chain OS=Drosophila melanogaster GN=betaTub85D PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 9.721e-16 Identity = 39/122 (31.97%), Postives = 68/122 (55.74%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 368 +Y+ ++RG + K+V+ + I+ K + FV+W P K + PP ++ + I NST++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 309 RYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSFFVEWIPNNCKTAVCDIPPR--------GLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBB2_DROHY (Tubulin beta-2 chain OS=Drosophila hydei GN=betaTub85D PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 9.721e-16 Identity = 39/122 (31.97%), Postives = 68/122 (55.74%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 368 +Y+ ++RG + K+V+ + I+ K + FV+W P K + PP ++ + I NST++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 309 RYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSFFVEWIPNNCKTAVCDIPPR--------GLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBB2_DROER (Tubulin beta-2 chain OS=Drosophila erecta GN=betaTub85D PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 9.721e-16 Identity = 39/122 (31.97%), Postives = 68/122 (55.74%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 368 +Y+ ++RG + K+V+ + I+ K + FV+W P K + PP ++ + I NST++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 309 RYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSFFVEWIPNNCKTAVCDIPPR--------GLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBB1_BRUPA (Tubulin beta-1 chain OS=Brugia pahangi PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 9.721e-16 Identity = 38/122 (31.15%), Postives = 68/122 (55.74%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 368 +Y+ M+RG + ++V+ + ++ K + FV+W P K + PP ++ + I N+T++ E+F RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 309 RYLTVAAMFRGRMSMREVDEQMMQVQNKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBB3_DROME (Tubulin beta-3 chain OS=Drosophila melanogaster GN=betaTub60D PE=1 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.270e-15 Identity = 38/122 (31.15%), Postives = 68/122 (55.74%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 368 +Y+ ++RG + K+V+ + ++ K + FV+W P K + PP ++ + I N+T++ E+F RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 315 RYLTVAAVFRGRMSMKEVDEQMLAVQNKNSSYFVEWIPNNVKTAVCDIPPK--------GLKMSSTFIGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 428
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBB_YEAST (Tubulin beta chain OS=Saccharomyces cerevisiae GN=TUB2 PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 1.658e-15 Identity = 41/122 (33.61%), Postives = 68/122 (55.74%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 368 +Y+ +RG V K+V + +++K + FV+W P + + +V P G + A I+NSTS+ E+F R+ +F M+ ++AF+HWY EGM+E EFSEA ++ L +Y Sbjct: 309 RYLTVAAFFRGKVSVKEVEDEMHKVQSKNSDYFVEWIPNNVQTAVC----SVAPQG----LDMAATFIANSTSIQELFKRVGDQFSAMFKRKAFLHWYTSEGMDELEFSEAESNMNDLVSEY 422
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBB_PSEAM (Tubulin beta chain OS=Pseudopleuronectes americanus PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.658e-15 Identity = 38/122 (31.15%), Postives = 68/122 (55.74%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 368 +Y+ ++RG + K+V+ + ++ K + FV+W P K + PP ++ + I NST++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 309 RYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMSSTFIGNSTAIQELFKRMSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBB_PNECA (Tubulin beta chain OS=Pneumocystis carinii GN=TUB-B PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.658e-15 Identity = 39/122 (31.97%), Postives = 68/122 (55.74%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 368 +Y+ ++RG V K+V + +++ K + FV+W P + + PP ++ + I NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 309 RYLTVAAIFRGRVSMKEVEDQMHSVQQKNSSYFVEWIPNNVQTALCSIPPR--------GLKMSSTFIGNSTSIQELFKRVGDQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBB2_PHYPO (Tubulin beta-2 chain OS=Physarum polycephalum GN=BETC PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.658e-15 Identity = 39/122 (31.97%), Postives = 67/122 (54.92%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 368 +Y+ +RG + K+V+ + ++TK + FV+W P K + PP ++ + I N+T + E+F RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 309 RYLTASATFRGKMSTKEVDEQMHAVQTKNSSFFVEWIPNNIKSSVCDIPPK--------GMKMSATFIGNNTCIQELFKRIGLQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422 The following BLAST results are available for this feature:
BLAST of EY659475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 376
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659475 ID=EY659475; Name=EY659475; organism=Citrus sinensis; type=EST; length=644bpback to top |