EY659474

Overview
NameEY659474
Unique NameEY659474
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7483 contig Csv1_Contig7483:1..897. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659474 vs. ExPASy Swiss-Prot
Match: CADH3_ORYSJ (Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza sativa subsp. japonica GN=CAD3 PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 4.437e-56
Identity = 104/198 (52.53%), Postives = 129/198 (65.15%), Query Frame = 3
Query:  117 KAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLHNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKVIPTYTSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFELXEXXXXXXXXXXXXXXXXXXXFAKAFGPK 710
            +A G AARDSSGHLSPF  SRR TGD+DV +K+L+CGICH+DLH IKNEW  S++P+VPGHEIAG VTE                     +C SCESC N  EN+CP+ + TY S++ DGT+TYGGYS  +V +ER++V FP++MPLD  APLLCAGITVY+P+KY  L                     FA+AFG K
Sbjct:   15 QAVGLAARDSSGHLSPFAISRRSTGDDDVAIKILFCGICHSDLHCIKNEWKHSIYPLVPGHEIAGVVTEVGKNVTRFKAGDRVGVGCMVNSCRSCESCNNGFENHCPEGVFTYNSVDKDGTVTYGGYSSMVVVHERFVVMFPEAMPLDVGAPLLCAGITVYTPMKYHGLNAPGKHVGVLGLGGLGHVAVKFARAFGLK 212          
BLAST of EY659474 vs. ExPASy Swiss-Prot
Match: CADH7_ARATH (Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis thaliana GN=CAD7 PE=1 SV=2)

HSP 1 Score: 210.305 bits (534), Expect = 1.208e-53
Identity = 105/210 (50.00%), Postives = 131/210 (62.38%), Query Frame = 3
Query:  117 KAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLHNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKVIPTYTSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFELXEXXXXXXXXXXXXXXXXXXXFAKAFGPK*QX*HLSQQKTE 746
            +AFG AA+D SG LSPF+FSRR TG++DVR KVL+CGICHTDL   KNEWG + +P+VPGHEI G VTE                     +C SC+SC +  ENYCPK+I T  + N D T+T+GGYSDHMV  E +I+R PD++PLD AAPLLCAG+TVYSP+KY  L +                   FAKA G K      S++K +
Sbjct:    8 EAFGLAAKDESGILSPFSFSRRATGEKDVRFKVLFCGICHTDLSMAKNEWGLTTYPLVPGHEIVGVVTEVGAKVKKFNAGDKVGVGYMAGSCRSCDSCNDGDENYCPKMILTSGAKNFDDTMTHGGYSDHMVCAEDFIIRIPDNLPLDGAAPLLCAGVTVYSPMKYHGLDKPGMHIGVVGLGGLGHVAVKFAKAMGTKVTVISTSERKRD 217          
BLAST of EY659474 vs. ExPASy Swiss-Prot
Match: CADH3_ARATH (Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis thaliana GN=CAD3 PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.692e-53
Identity = 92/167 (55.09%), Postives = 117/167 (70.06%), Query Frame = 3
Query:  117 KAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLHNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKVIPTYTSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYF 617
            +AFGWAA D SG LSPF+FSRRE G+ DV +K+L+CG+CH+DLH IKN WGFS +P++PGHEI G  T+                     +C SCESC  DLENYCPKV+ TY S ++DGT   GGYSD +V + R+++  PD +P D+ APLLCAGITVYSP+KY+
Sbjct:    6 RAFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYY 172          
BLAST of EY659474 vs. ExPASy Swiss-Prot
Match: CADH2_ARATH (Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis thaliana GN=CAD2 PE=1 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.279e-52
Identity = 93/168 (55.36%), Postives = 117/168 (69.64%), Query Frame = 3
Query:  117 KAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLHNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKVIPTYTSINTDGTI-TYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYF 617
            KAFGWAA D SG LSPF+FSRRE G+ DV +K+L+CG+CH+DLH IKN WGFS +P++PGHEI G  T+                     +C SCESC  DLENYCPKV+ TY S ++DGT    GGYSD +V + R+++  PD +P D+ APLLCAGITVYSP+KY+
Sbjct:    6 KAFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTSRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYY 173          
BLAST of EY659474 vs. ExPASy Swiss-Prot
Match: CAD8C_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8C OS=Oryza sativa subsp. japonica GN=CAD8C PE=2 SV=2)

HSP 1 Score: 197.978 bits (502), Expect = 6.503e-51
Identity = 99/218 (45.41%), Postives = 124/218 (56.88%), Query Frame = 3
Query:   60 NIAVLSSKMAKSPEEEHPVKAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLHNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKVIPTYTSINTD---GTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFELXEXXXXXXXXXXXXXXXXXXXFAKAFG 704
            N+    +  A+   EEH   A GWAARD SG LSP+NFSRR   D+DV +KVLYCGICHTDLH +KN+WG +++P+VPGHEI G VT                      +C  CE C N  ENYC K++ T   ++ D   G  T GG+SD +V NE Y++R P  +PLD+AAPLLCAG+TVYSP+    L                     FAKAFG
Sbjct:   63 NLQRARASAAEQGMEEHGKAAVGWAARDDSGVLSPYNFSRRAQKDDDVTIKVLYCGICHTDLHIVKNDWGNAMYPVVPGHEIVGVVTGVGAGVTKFKAGDTVGVGYFVASCRGCECCGNGYENYCAKMVTTCNGVDHDHGGGAATQGGFSDAIVVNEHYVLRVPAGLPLDSAAPLLCAGVTVYSPMVIHGLNAPGKHVGVVGLGGLGHVAVKFAKAFG 280          

HSP 2 Score: 25.0238 bits (53), Expect = 6.503e-51
Identity = 17/62 (27.42%), Postives = 30/62 (48.39%), Query Frame = 2
Query:  683 QICQGFWAKVTXIAPLPAED*SS*-HLGADSFLI--------ALTLTIAGCMGTLMGY*PVS 841
            +  + F  +VT I+  P +   +  HLGAD FL+        A   T+ G + T+  + P++
Sbjct:  274 KFAKAFGMRVTVISTSPGKRQEALEHLGADEFLVSRDAGQMAAAAATMDGILNTVSAWHPIA 335          
BLAST of EY659474 vs. ExPASy Swiss-Prot
Match: CAD8B_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8B OS=Oryza sativa subsp. japonica GN=CAD8B PE=3 SV=2)

HSP 1 Score: 196.823 bits (499), Expect = 2.447e-50
Identity = 97/215 (45.12%), Postives = 122/215 (56.74%), Query Frame = 3
Query:   60 NIAVLSSKMAKSPEEEHPVKAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLHNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKVIPTYTSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFELXEXXXXXXXXXXXXXXXXXXXFAKAFG 704
            N+    +  A+   EEH   A GWAARD SG LSP+NFSRR   D+DV +KVLYCGICHTDLH +KN+WG +++P+VPGHEI G VT                      +C +C+SC    ENYCP ++ T    +  G  T GG+SD +V NE Y++R P  +PLD AAPLLCAG+TVYSP+    L                     FAKAFG
Sbjct:   63 NLQRARASAAEQGMEEHGKAAVGWAARDDSGVLSPYNFSRRAQKDDDVTIKVLYCGICHTDLHVVKNDWGNAMYPVVPGHEIVGVVTGVGAGVTKFKAGDTVGVGFFVGSCRTCDSCGKGYENYCPTMVITSNGKDYGGAATQGGFSDAIVVNEHYVLRVPAGLPLDGAAPLLCAGVTVYSPMVIHGLNAPGKHVGVVGLGGLGHVAVKFAKAFG 277          

HSP 2 Score: 24.2534 bits (51), Expect = 2.447e-50
Identity = 18/62 (29.03%), Postives = 30/62 (48.39%), Query Frame = 2
Query:  683 QICQGFWAKVTXIAPLPAED*SS*-HLGADSFLI--------ALTLTIAGCMGTLMGY*PVS 841
            +  + F  +VT I+  P +   +  HLGAD FL+        A   T+ G + T+  + PV+
Sbjct:  271 KFAKAFGMRVTVISTSPGKRREALEHLGADEFLVSRDAGQMAAAAGTMDGILNTVSAWHPVA 332          
BLAST of EY659474 vs. ExPASy Swiss-Prot
Match: MTDH_PETCR (Mannitol dehydrogenase (Fragment) OS=Petroselinum crispum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 1.058e-49
Identity = 98/208 (47.12%), Postives = 125/208 (60.10%), Query Frame = 3
Query:  156 LSPFNFSRRETGDEDVRLKVLYCGICHTDLHNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKVIPTYTSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFELXEXXXXXXXXXXXXXXXXXXXFAKAFGPK*QX*HLSQ-QKTEALDILALIHF 776
            LSPF FSRR TGD DVR KVLYCG+CH+DLH +KNEWG + +P+VPGHEI G VTE                     +C SCE+C +D EN C K + TY   N DG+ITYGGY+D MVA++ +++R+P+++PLD+ APLLCAGIT YSPL+Y  L +                    AKAFG        S+ +K EAL+ L    F
Sbjct:    2 LSPFKFSRRATGDNDVRFKVLYCGVCHSDLHMVKNEWGMTTYPIVPGHEIVGRVTEVGSKVEKFKVGDAVGVGCLVGSCLSCENCDDDSENNCAKQVQTYAFTNVDGSITYGGYADSMVADQHFVLRWPENLPLDSGAPLLCAGITTYSPLRYHGLDKPGTKVGVVGLGGLGHVAVKMAKAFGAHVTVISTSESKKQEALEKLGADEF 209          
BLAST of EY659474 vs. ExPASy Swiss-Prot
Match: CADH7_ORYSJ (Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa subsp. japonica GN=CAD7 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.806e-49
Identity = 99/214 (46.26%), Postives = 127/214 (59.35%), Query Frame = 3
Query:   90 KSPEEEHPVKAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLHNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCP-KVIPTYTSINTDGTITYGGYSDHMVANERYIVRFPDS--------MPLDAAAPLLCAGITVYSPLKYFELXEXXXXXXXXXXXXXXXXXXXFAKAFG 704
            ++P  +H  KA G AA D SGHL+P   SRR+TGD+DV +KVLYCGICH+DLH IKNEW  +++P+V GHEI G VTE                      C  CESC +  ENYC   V+ TY S++ DGT TYGGYSD +V ++R++VRFP S        +PLD+ APLLCAG+TVY+P++   L E                   FA+AFG
Sbjct:   13 QAPPPQHTRKAVGLAAHDDSGHLTPIRISRRKTGDDDVAIKVLYCGICHSDLHTIKNEWRNAVYPVVAGHEITGVVTEVGKNVARFKAGDEVGVGCMVNTCGGCESCRDGCENYCSGGVVFTYNSVDRDGTRTYGGYSDAVVVSQRFVVRFPSSAGGGAGAALPLDSGAPLLCAGVTVYAPMRQHGLCEAGKHVGVVGLGGLGHVAVKFARAFG 226          
BLAST of EY659474 vs. ExPASy Swiss-Prot
Match: MTDH3_STYHU (Probable mannitol dehydrogenase 3 OS=Stylosanthes humilis GN=CAD3 PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 2.358e-49
Identity = 101/209 (48.33%), Postives = 125/209 (59.81%), Query Frame = 3
Query:   87 AKSPEEEHPVKAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLHNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKVIPTYTSINTDGTITYGGYSDHMVANERYIVRFPDSMPLD-AAAPLLCAGITVYSPLKYFELXEXXXXXXXXXXXXXXXXXXXFAKAFGPK 710
            A   E EHP KAFGWAARDSSG LSPFNFSRR+ G+EDV L+VLYCGICHTDLH  KN++G S++P VPGHE+ G V E                     +C SC++C ++LENYCPK I T    + DGT TYGGYSD MV +E ++ R P+ +PLD   +  LC G + +SPLKY+ L +                   FAK  G K
Sbjct:    3 ASQVEFEHPRKAFGWAARDSSGLLSPFNFSRRDIGEEDVALEVLYCGICHTDLHMAKNDFGNSIYPYVPGHEVIGIVAEVGSKVEKYKVGDKVGVGYFVESCRSCQNCIDNLENYCPKHILTQGDKHIDGTTTYGGYSDSMVVDEHFVTRIPEGLPLDGCGSSSLCWGYS-HSPLKYYGLDKPGLHVGVVGLGGLGHMVAKFAKTHGLK 210          
BLAST of EY659474 vs. ExPASy Swiss-Prot
Match: CADH6_ORYSJ (Probable cinnamyl alcohol dehydrogenase 6 OS=Oryza sativa subsp. japonica GN=CAD6 PE=2 SV=2)

HSP 1 Score: 192.971 bits (489), Expect = 1.996e-48
Identity = 90/168 (53.57%), Postives = 110/168 (65.48%), Query Frame = 3
Query:  108 HPVKAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLHNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKVIPTYTSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLK 611
            H     GWAA D SG + PF F RRE G +DV +KV YCG+CHTDLH I N+WG +++P+VPGHEI G VT+                     +C  CE C    ENYC KV  TY  I  DG+ITYGGYS  +VA++R++VR PD++PLDAAAPLLCAGITVYSP+K
Sbjct:    7 HTQTVSGWAAMDESGKIVPFVFKRRENGVDDVTIKVKYCGMCHTDLHFIHNDWGITMYPVVPGHEITGVVTKVGTNVAGFKVGDRVGVGCIAASCLDCEHCRRSEENYCDKVALTYNGIFWDGSITYGGYSGMLVAHKRFVVRIPDTLPLDAAAPLLCAGITVYSPMK 174          
The following BLAST results are available for this feature:
BLAST of EY659474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
CADH3_ORYSJ4.437e-5652.53Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza... [more]
CADH7_ARATH1.208e-5350.00Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis th... [more]
CADH3_ARATH2.692e-5355.09Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis th... [more]
CADH2_ARATH2.279e-5255.36Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis th... [more]
CAD8C_ORYSJ6.503e-5145.41Probable cinnamyl alcohol dehydrogenase 8C OS=Oryz... [more]
CAD8B_ORYSJ2.447e-5045.12Probable cinnamyl alcohol dehydrogenase 8B OS=Oryz... [more]
MTDH_PETCR1.058e-4947.12Mannitol dehydrogenase (Fragment) OS=Petroselinum ... [more]
CADH7_ORYSJ1.806e-4946.26Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa s... [more]
MTDH3_STYHU2.358e-4948.33Probable mannitol dehydrogenase 3 OS=Stylosanthes ... [more]
CADH6_ORYSJ1.996e-4853.57Probable cinnamyl alcohol dehydrogenase 6 OS=Oryza... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-E08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659474 ID=EY659474; Name=EY659474; organism=Citrus sinensis; type=EST; length=897bp
AACAAAAACTGGTACTTTTACTCGTCTCATCACATCATTCAAACCACTAT
AATAATGATAACATTGCCGTTCTCTCATCCAAAATGGCAAAATCACCAGA
AGAAGAACATCCAGTAAAGGCCTTTGGGTGGGCAGCCCGAGACAGCTCCG
GCCATCTCTCCCCATTCAACTTCTCCAGAAGGGAAACGGGTGATGAGGAT
GTGAGGCTGAAGGTATTGTATTGTGGGATCTGCCATACTGATCTCCACAA
CATCAAGAATGAATGGGGCTTCTCTCTCTTCCCTATGGTTCCTGGGCATG
AAATTGCAGGGGAAGTGACAGAAGTTGGTAGCAAAGTAAGAAAGGTTAAA
GTGGGAGATAAAGTTGGAGTTGGATGCATGGTTGGTGCATGCCACAGCTG
CGAGAGCTGTGCCAATGACCTTGAAAATTACTGTCCGAAAGTGATACCCA
CCTACACTTCCATTAACACTGACGGAACAATCACATACGGAGGCTACTCT
GATCACATGGTTGCCAATGAGCGCTACATTGTTCGATTCCCTGATAGCAT
GCCCCTTGATGCTGCTGCTCCCCTGCTTTGCGCCGGGATTACCGTGTACA
GTCCATTGAAATACTTTGAACTANCAGAACANGGGAAGCATGTAGGCATC
GTTGGCCTTGGCGGNCTTGGTCATGTCGCTGTCAAATTTGCCAAGGCTTT
TGGGCCAAAGTGACAGNTATAGCACCTCTCCCAGCAGAAGACTGAAGCTC
TTGACATCTTGGCGCTGATTCATTTTTGATAGCCCTGACCCTGACCATTG
CAGGTTGCATGGGCACATTGATGGGATATTGACCCGTGTCCGCTTGCACC
CATTTTGCCATGGTCGTCTATTAAAACAAGGCAACTGGTTTGGTTGG
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