EY659474

Overview
NameEY659474
Unique NameEY659474
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7483 contig Csv1_Contig7483:1..897. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659474 vs. ExPASy Swiss-Prot
Match: CADH4_ORYSJ (Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza sativa subsp. japonica GN=CAD4 PE=3 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 1.637e-42
Identity = 87/217 (40.09%), Postives = 123/217 (56.68%), Query Frame = 3
Query:  129 WAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLHNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKVIPTYTSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFELXEXXXXXXXXXXXXXXXXXXXFAKAFGPK*QX*HLSQQK-TEALDILALIHF 776
            WAARD SG LSP+ F+RRE   EDV L++ +CG+C+ D+   +N +  S++P+VPGHEIAG VTE                     +C  CE+C + LEN+C K + TY S+++DGT+T GGYS H++ ++RY  + P   PL  AAPLLCAGITVY+P+    + +                   F KAFG K      S+ K  EA+++L   +F
Sbjct:   13 WAARDPSGILSPYKFNRREVQSEDVSLRITHCGVCYADVIWTRNMFNDSIYPLVPGHEIAGVVTEVGADVKGFKVGDHVGVGVYVNSCQDCENCNSSLENHCSKCVVTYNSVDSDGTVTKGGYSSHILVHQRYCFKIPADYPLSKAAPLLCAGITVYTPMIRHNMNQPGKSLGVIGLGGLGHMAVKFGKAFGLKVTVFSTSESKREEAINLLGADNF 229          
BLAST of EY659474 vs. ExPASy Swiss-Prot
Match: CADH1_EUCGU (Probable cinnamyl alcohol dehydrogenase 1 OS=Eucalyptus gunnii GN=CAD1 PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.792e-42
Identity = 91/213 (42.72%), Postives = 115/213 (53.99%), Query Frame = 3
Query:  126 GWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLHNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKVIPTYTSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFELXEXXXXXXXXXXXXXXXXXXXFAKAFGPK*QX*HLSQQK-TEALDIL 761
            GWAARD SG LSP+ +S R TG ED+ +KVL CGICH+D+H IKN+ G S +PMVPGHE+ GEV E                      C SC  C +D E YC K I  Y  + TDG  T GG++  +V  ER++V+ PD +  + AAPL+CAG+TVY PL  F L +                    AKA G        S +K TEAL+ L
Sbjct:   12 GWAARDPSGVLSPYTYSLRNTGPEDLYIKVLSCGICHSDIHQIKNDLGMSHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGTGIVVGCCRSCSPCNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGERFVVKIPDGLESEQAAPLMCAGVTVYRPLVRFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRTEALEHL 224          
BLAST of EY659474 vs. ExPASy Swiss-Prot
Match: CADH2_TOBAC (Probable cinnamyl alcohol dehydrogenase 2 OS=Nicotiana tabacum GN=CAD19 PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.061e-41
Identity = 76/166 (45.78%), Postives = 105/166 (63.25%), Query Frame = 3
Query:  120 AFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLHNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKVIPTYTSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYF 617
            A GWAARD SG LSP+ ++ R TG EDV++KVLYCG+CH+DLH +KN+ G S +P+VPGHE+ G+V E                     +C +C  C  ++E YC K I     + TDG  T GG+++ MV ++ ++V+ P+ M  + AAPLLCAGITVYSP  +F
Sbjct:   10 AIGWAARDPSGLLSPYTYTLRNTGPEDVQVKVLYCGLCHSDLHQVKNDLGMSNYPLVPGHEVVGKVVEVGADVSKFKVGDTVGVGLLVGSCRNCGPCKREIEQYCNKKIWNCNDVYTDGKPTQGGFANSMVVDQNFVVKIPEGMAPEQAAPLLCAGITVYSPFNHF 175          
BLAST of EY659474 vs. ExPASy Swiss-Prot
Match: CADH_MEDSA (Probable cinnamyl alcohol dehydrogenase OS=Medicago sativa GN=CAD2 PE=1 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.613e-40
Identity = 73/166 (43.98%), Postives = 105/166 (63.25%), Query Frame = 3
Query:  126 GWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLHNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKVIPTYTSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFEL 623
            G AA+D SG L+P+ ++ R TG +DV +K+ YCG+CH+DLH IKN+ G S +PMVPGHE+ GEV E                      C SC +C +++E YC K I +Y  + TDG IT GG+++  V  ++++V+ P+ +  +  APLLCAG+TVYSPL +F L
Sbjct:   13 GLAAKDPSGILTPYTYTLRNTGPDDVYIKIHYCGVCHSDLHQIKNDLGMSNYPMVPGHEVVGEVLEVGSNVTRFKVGEIVGVGLLVGCCKSCRACDSEIEQYCNKKIWSYNDVYTDGKITQGGFAESTVVEQKFVVKIPEGLAPEQVAPLLCAGVTVYSPLSHFGL 178          
BLAST of EY659474 vs. ExPASy Swiss-Prot
Match: CADH_EUCBO (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus botryoides GN=CAD1 PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.928e-39
Identity = 88/213 (41.31%), Postives = 114/213 (53.52%), Query Frame = 3
Query:  126 GWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLHNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKVIPTYTSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFELXEXXXXXXXXXXXXXXXXXXXFAKAFGPK*QX*HLSQQK-TEALDIL 761
            GWAARD SG LSP+ +S R TG ED+ +KVL CGICH+D+H IKN+ G S +PMVPGHE+ GEV E                      C SC  C +D E YC K I  Y  + TDG  T GG++  +V  +R++V+ PD +  +  A ++CAG+TVYSPL  F L +                    AKA G        S +K TEAL+ L
Sbjct:   12 GWAARDPSGVLSPYTYSLRNTGPEDLYIKVLSCGICHSDIHQIKNDLGMSHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGTGIVVGCCRSCGPCNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGQRFVVKIPDGLESEQDA-VMCAGVTVYSPLVRFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRTEALEHL 223          
BLAST of EY659474 vs. ExPASy Swiss-Prot
Match: CADH1_ARATH (Probable cinnamyl alcohol dehydrogenase 1 OS=Arabidopsis thaliana GN=CAD1 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.484e-35
Identity = 82/217 (37.79%), Postives = 113/217 (52.07%), Query Frame = 3
Query:  129 WAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLHNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKVIPTYTSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFELXEXXXXXXXXXXXXXXXXXXXFAKAFGPK*QX*HLS-QQKTEALDILALIHF 776
            WAARD SG LSP   +RR    +DV L + +CG+C+ D+   +N+ G S +P+VPGHEIAG VT+                     +C  CE C    E  C K + T+  I+ DG++T GGYS H+V +ERY  + P   PL++AAPLLCAGITVY+P+    + +                   F KAFG        S  +K EAL++L   +F
Sbjct:   14 WAARDPSGLLSPHTITRRSVTTDDVSLTITHCGVCYADVIWSRNQHGDSKYPLVPGHEIAGIVTKVGPNVQRFKVGDHVGVGTYVNSCRECEYCNEGQEVNCAKGVFTFNGIDHDGSVTKGGYSSHIVVHERYCYKIPVDYPLESAAPLLCAGITVYAPMMRHNMNQPGKSLGVIGLGGLGHMAVKFGKAFGLSVTVFSTSISKKEEALNLLGAENF 230          
BLAST of EY659474 vs. ExPASy Swiss-Prot
Match: ADHC_MYCTU (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium tuberculosis GN=adhC PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.306e-35
Identity = 71/164 (43.29%), Postives = 97/164 (59.15%), Query Frame = 3
Query:  129 WAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLHNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYC-PKVIPTYTSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYF 617
            +AA  ++  L+    +RR+ G  DV + + + GICH+D+H +K EWG   +P+VPGHEIAG VT                      +C  C SC   +E YC P    TY SI  DG  T GGYS+ +V +E Y++R PD +PLD AAPLLCAGIT+YSPL+++
Sbjct:    7 YAAMSATEPLTKTTITRRDPGPHDVAIDIKFAGICHSDIHTVKAEWGQPNYPVVPGHEIAGVVTAVGSEVTKYRQGDRVGVGCFVDSCRECNSCTRGIEQYCKPGANFTYNSIGKDGQPTQGGYSEAIVVDENYVLRIPDVLPLDVAAPLLCAGITLYSPLRHW 170          
BLAST of EY659474 vs. ExPASy Swiss-Prot
Match: ADHC_MYCBO (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium bovis GN=adhC PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.306e-35
Identity = 71/164 (43.29%), Postives = 97/164 (59.15%), Query Frame = 3
Query:  129 WAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLHNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYC-PKVIPTYTSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYF 617
            +AA  ++  L+    +RR+ G  DV + + + GICH+D+H +K EWG   +P+VPGHEIAG VT                      +C  C SC   +E YC P    TY SI  DG  T GGYS+ +V +E Y++R PD +PLD AAPLLCAGIT+YSPL+++
Sbjct:    7 YAAMSATEPLTKTTITRRDPGPHDVAIDIKFAGICHSDIHTVKAEWGQPNYPVVPGHEIAGVVTAVGSEVTKYRQGDRVGVGCFVDSCRECNSCTRGIEQYCKPGANFTYNSIGKDGQPTQGGYSEAIVVDENYVLRIPDVLPLDVAAPLLCAGITLYSPLRHW 170          
BLAST of EY659474 vs. ExPASy Swiss-Prot
Match: ADHA_BACSU (Probable formaldehyde dehydrogenase adhA OS=Bacillus subtilis GN=adhA PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.094e-33
Identity = 67/150 (44.67%), Postives = 90/150 (60.00%), Query Frame = 3
Query:  177 RRETGDEDVRLKVLYCGICHTDLHNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPK-VIPTYTSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFEL 623
            RR     DV + + + GICH+D+H+  +EWG  +FPMVPGHEIAG VT                      +C  CE C N  E +C K V+ TY S++ DG  TYGGYS  +V  +R++VR PD + +D A+PLLCAGIT YSPLK++ +
Sbjct:   26 RRGLRPHDVLIDIKFSGICHSDIHSAFDEWGGGIFPMVPGHEIAGVVTAVGTKVTKLAVGDRVGVGCFVDSCGECEYCLNAEEQFCTKGVVQTYNSVDYDGNPTYGGYSQKIVVTDRFVVRIPDRLEMDVASPLLCAGITTYSPLKHWNV 175          
BLAST of EY659474 vs. ExPASy Swiss-Prot
Match: YAHK_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein yahK OS=Escherichia coli (strain K12) GN=yahK PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 7.621e-32
Identity = 69/171 (40.35%), Postives = 96/171 (56.14%), Query Frame = 3
Query:  114 VKAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLHNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKVIPTYTSINTDGT-ITYGGYSDHMVANERYIVRFPDSM-PLDAAAPLLCAGITVYSPLKYFE 620
            +KA G  A  +   L P + +RRE G  DV++++ YCG+CH+DLH +++EW  +++P VPGHEI G V                       +C  CE C + LENYC  +  TY S   D    T GGYS  +V +ERY++R       L A APLLCAGIT YSPL++++
Sbjct:    3 IKAVG--AYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRHWQ 171          
The following BLAST results are available for this feature:
BLAST of EY659474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
CADH4_ORYSJ1.637e-4240.09Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza... [more]
CADH1_EUCGU2.792e-4242.72Probable cinnamyl alcohol dehydrogenase 1 OS=Eucal... [more]
CADH2_TOBAC1.061e-4145.78Probable cinnamyl alcohol dehydrogenase 2 OS=Nicot... [more]
CADH_MEDSA2.613e-4043.98Probable cinnamyl alcohol dehydrogenase OS=Medicag... [more]
CADH_EUCBO4.928e-3941.31Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]
CADH1_ARATH1.484e-3537.79Probable cinnamyl alcohol dehydrogenase 1 OS=Arabi... [more]
ADHC_MYCTU3.306e-3543.29NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
ADHC_MYCBO3.306e-3543.29NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
ADHA_BACSU3.094e-3344.67Probable formaldehyde dehydrogenase adhA OS=Bacill... [more]
YAHK_ECOLI7.621e-3240.35Uncharacterized zinc-type alcohol dehydrogenase-li... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-E08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659474 ID=EY659474; Name=EY659474; organism=Citrus sinensis; type=EST; length=897bp
AACAAAAACTGGTACTTTTACTCGTCTCATCACATCATTCAAACCACTAT
AATAATGATAACATTGCCGTTCTCTCATCCAAAATGGCAAAATCACCAGA
AGAAGAACATCCAGTAAAGGCCTTTGGGTGGGCAGCCCGAGACAGCTCCG
GCCATCTCTCCCCATTCAACTTCTCCAGAAGGGAAACGGGTGATGAGGAT
GTGAGGCTGAAGGTATTGTATTGTGGGATCTGCCATACTGATCTCCACAA
CATCAAGAATGAATGGGGCTTCTCTCTCTTCCCTATGGTTCCTGGGCATG
AAATTGCAGGGGAAGTGACAGAAGTTGGTAGCAAAGTAAGAAAGGTTAAA
GTGGGAGATAAAGTTGGAGTTGGATGCATGGTTGGTGCATGCCACAGCTG
CGAGAGCTGTGCCAATGACCTTGAAAATTACTGTCCGAAAGTGATACCCA
CCTACACTTCCATTAACACTGACGGAACAATCACATACGGAGGCTACTCT
GATCACATGGTTGCCAATGAGCGCTACATTGTTCGATTCCCTGATAGCAT
GCCCCTTGATGCTGCTGCTCCCCTGCTTTGCGCCGGGATTACCGTGTACA
GTCCATTGAAATACTTTGAACTANCAGAACANGGGAAGCATGTAGGCATC
GTTGGCCTTGGCGGNCTTGGTCATGTCGCTGTCAAATTTGCCAAGGCTTT
TGGGCCAAAGTGACAGNTATAGCACCTCTCCCAGCAGAAGACTGAAGCTC
TTGACATCTTGGCGCTGATTCATTTTTGATAGCCCTGACCCTGACCATTG
CAGGTTGCATGGGCACATTGATGGGATATTGACCCGTGTCCGCTTGCACC
CATTTTGCCATGGTCGTCTATTAAAACAAGGCAACTGGTTTGGTTGG
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