EY659472

Overview
NameEY659472
Unique NameEY659472
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length908
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY659472 vs. ExPASy Swiss-Prot
Match: LAR_DESUN (Leucoanthocyanidin reductase OS=Desmodium uncinatum GN=LAR PE=1 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 1.013e-47
Identity = 101/236 (42.80%), Postives = 147/236 (62.29%), Query Frame = 3 
Query:   36 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQ--VDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYVASNFFAAYFLPNLSQPGATAPPRG*VVILGDGNPIAVYNKEDDIGTYTIKAVDDPXTLXKNPYIKPPGYIYSFNDLVSLWERKMGK 737
            +K++ L +GGTG+IG+FI +AS+  G+PTF+LVR   +S PSK+ ++  F+  G  ++ G + + E + K +K+  +DVVIS VG   L DQ+ ++ AIK    IKRF PSEFG+DVDR   VEP  + +  K  +RRAVE  GIP+T +  N  A++   +   P    PP     I GDGN  A +   +DIG +T+K +DD  TL KN + +P    YS N+L SLWE+K+G+
Sbjct:   11 TKNRTLVVGGTGFIGQFITKASLGFGYPTFLLVRPGPVS-PSKAVIIKTFQDKGAKVIYGVINDKECMEKILKEYEIDVVISLVGGARLLDQLTLLEAIKSVKTIKRFLPSEFGHDVDRTDPVEPGLTMYKEKRLVRRAVEEYGIPFTNICCNSIASWPYYDNCHPSQVPPPMDQFQIYGDGNTKAYFIDGNDIGKFTMKTIDDIRTLNKNVHFRPSSNCYSINELASLWEKKIGR 245
The following BLAST results are available for this feature:
BLAST of EY659472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
LAR_DESUN1.013e-4742.80Leucoanthocyanidin reductase OS=Desmodium uncinatu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-E06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659472 ID=EY659472; Name=EY659472; organism=Citrus sinensis; type=EST; length=908bp
CCCGAAATTTAACTGAACAAGTCTCGGTAATGGCGTCGAAAAGCAAGATT
CTATTCATCGGTGGGACAGGGTACATCGGCAAATTCATCGTCGAAGCGAG
CGTGAAAGCCGGCCACCCGACGTTCGTGCTCGTGAGAGAATCCACACTCT
CCGCTCCTTCCAAATCTCAGCTCCTCGATCACTTCAAAAAACTCGGCGTC
AATCTCGTCATCGGAGATGTGTTGAATCACGAGAGCTTGGTGAAGGCGAT
AAAACAAGTGGACGTGGTGATATCAACGGTCGGTCACACTTTATTAGGTG
ATCAGGTCAAGATTATTGCGGCCATTAAAGAAGCTGGTAACATTAAGAGA
TTCTTCCCTTCAGAATTTGGGAATGATGTTGATCGAGTCCATGCCGTTGA
GCCAGCAAAATCAGCATTTGCCACAAAGGCGAAAATCCGCCGAGCCGTTG
AGGCTGAAGGGATTCCGTATACTTATGTAGCGTCGAATTTCTTTGCTGCT
TACTTCCTTCCCAATTTGTCGCAGCCCGGTGCCACTGCCCCACCTAGGGG
ATAAGTTGTCATCTTAGGCGATGGAAATCCTATAGCTGTTTATAACAAGG
AAGATGATATTGGAACCTATACTATCAAAGCGGTTGATGATCCNNAGACC
TTGNACAAAAATCCTTACATTAAACCCCCTGGGTATATTTACTCATTCAA
TGATCTTGTGTCCCTGTGGGAGAGGAAGATGGGCAAACCCTCGAAAGGGT
GTTACGTCCGGAGAGCAAGTCTAANGATATCCAGAAGCTGACCTNCAGCA
ATGGGATTTATCAATCACCCTCTGCTTTGGGAGGGAGATCAACCACTTCA
GATGGACATGGTTGGAGTGAAGCCTGCAGTTTCCTCAGTCAGTCCCTCAG
TGGTGGTT
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