EY659470

Overview
NameEY659470
Unique NameEY659470
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length917
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_SHESH (L-threonine 3-dehydrogenase OS=Shewanella sediminis (strain HAW-EB3) GN=tdh PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.661e-16
Identity = 51/159 (32.08%), Postives = 85/159 (53.46%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTV 501
            G+    +V PA   FK+PD++S +  ++ +P    +H     ++  E +VLI GAGPIG++     R  GA  +VI DV++YRL +A ++GA   V V+  +L+ + EE+      M  G DV  + +G      + L     GGK+ ++G+   EM +
Sbjct:  119 GAFAEYLVIPAFNAFKIPDDISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVCRHVGARHVVITDVNEYRLELANKMGATRAVNVAKESLEGVMEEL-----GMTEGFDVGLEMSGVPSAFHSMLDTMNHGGKIAMLGIPGGEMAI 271          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_CHRVO (L-threonine 3-dehydrogenase OS=Chromobacterium violaceum GN=tdh PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.661e-16
Identity = 52/152 (34.21%), Postives = 84/152 (55.26%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            G+    +V PA   F +PD++S +  ++ +P    +H     N+  E +VLI GAGPIG++ +  A+  GA  +VI DV+DYRL +AK++GA   V V+  +L+ + +E+      M  G DV  + +G  +     L     GGKV L+G+
Sbjct:  119 GAFAEYLVIPAFNAFPIPDDISDDLASIFDPFGNAVHTALSFNLVGE-DVLITGAGPIGIMAVAIAKHVGARHVVITDVNDYRLELAKKMGATRAVNVAREDLKAVMQELH-----MSEGFDVGLEMSGNPQAFRQMLETMNHGGKVALLGI 264          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_BURVG (L-threonine 3-dehydrogenase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=tdh PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.661e-16
Identity = 51/152 (33.55%), Postives = 83/152 (54.61%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            G+    +  PA   FK+P  +S +  ++ +P     H     N+  E +VLI GAGPIG++ +  A+  GA  +VI D++DYRL +A+++GA   V V+  +L+D+  E+      M  G DV  + +G     ++ L A   GGKV L+G+
Sbjct:  119 GAFAEYLAIPAFNAFKIPPEISDDLASIFDPFGNATHTALSFNLVGE-DVLITGAGPIGIMAVAIAKHVGARNVVITDINDYRLELARKMGATRAVNVARESLRDVMAELR-----MTEGFDVGLEMSGVPSAFTSLLEAMNHGGKVALLGI 264          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: ADH_RALEU (Alcohol dehydrogenase OS=Ralstonia eutropha GN=adh PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.699e-16
Identity = 50/150 (33.33%), Postives = 81/150 (54.00%), Query Frame = 1
Query:   76 LPDNVSLEEGAMC-EPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAA 522
            +PD ++ E+  MC + +S G      ANI     V +   GPIGL    GAR  GA  I+ +D +D+RL +A+++GAD  V ++    D+ +EV K+    G G+D S +  G   T   +L   + GG +  +G+   ++T+PL+  AA
Sbjct:  153 IPDGLTDEQVLMCPDIMSTGFKGAENANIRIGHTVAVFAQGPIGLCATAGARLCGATTIIAIDGNDHRLEIARKMGAD--VVLNFRNCDVVDEVMKL--TGGRGVDASIEALGTQATFEQSLRVLKPGGTLSSLGVYSSDLTIPLSAFAA 298          

HSP 2 Score: 20.7866 bits (42), Expect = 4.699e-16
Identity = 6/18 (33.33%), Postives = 13/18 (72.22%), Query Frame = 2
Query:  578 LEFLXSGKIDVKPLITHR 631
            +  + SG++D+  L+TH+
Sbjct:  321 INVIESGRVDLGALVTHQ 338          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_BURPS (L-threonine 3-dehydrogenase OS=Burkholderia pseudomallei GN=tdh PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.088e-16
Identity = 51/152 (33.55%), Postives = 83/152 (54.61%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            G+    +  PA   FK+P  +S +  A+ +P     H     N+  E +VLI GAGPIG++ +  A+  GA  +VI D++DYRL +A+++GA   V VS  +L+D+  ++      M  G DV  + +G     ++ L +   GGKV L+G+
Sbjct:  119 GAFAEYLAIPAFNAFKIPPEISDDLAAIFDPFGNATHTALSFNLVGE-DVLITGAGPIGVMAVAIAKHVGARNVVITDINDYRLELARKMGATRAVNVSRESLRDVMADLH-----MTEGFDVGLEMSGVPSAFTSLLESMNHGGKVALLGI 264          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_BURP6 (L-threonine 3-dehydrogenase OS=Burkholderia pseudomallei (strain 668) GN=tdh PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.088e-16
Identity = 51/152 (33.55%), Postives = 83/152 (54.61%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            G+    +  PA   FK+P  +S +  A+ +P     H     N+  E +VLI GAGPIG++ +  A+  GA  +VI D++DYRL +A+++GA   V VS  +L+D+  ++      M  G DV  + +G     ++ L +   GGKV L+G+
Sbjct:  119 GAFAEYLAIPAFNAFKIPPEISDDLAAIFDPFGNATHTALSFNLVGE-DVLITGAGPIGVMAVAIAKHVGARNVVITDINDYRLELARKMGATRAVNVSRESLRDVMADLH-----MTEGFDVGLEMSGVPSAFTSLLESMNHGGKVALLGI 264          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_BURP1 (L-threonine 3-dehydrogenase OS=Burkholderia pseudomallei (strain 1710b) GN=tdh PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.088e-16
Identity = 51/152 (33.55%), Postives = 83/152 (54.61%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            G+    +  PA   FK+P  +S +  A+ +P     H     N+  E +VLI GAGPIG++ +  A+  GA  +VI D++DYRL +A+++GA   V VS  +L+D+  ++      M  G DV  + +G     ++ L +   GGKV L+G+
Sbjct:  119 GAFAEYLAIPAFNAFKIPPEISDDLAAIFDPFGNATHTALSFNLVGE-DVLITGAGPIGVMAVAIAKHVGARNVVITDINDYRLELARKMGATRAVNVSRESLRDVMADLH-----MTEGFDVGLEMSGVPSAFTSLLESMNHGGKVALLGI 264          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_BURP0 (L-threonine 3-dehydrogenase OS=Burkholderia pseudomallei (strain 1106a) GN=tdh PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.088e-16
Identity = 51/152 (33.55%), Postives = 83/152 (54.61%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            G+    +  PA   FK+P  +S +  A+ +P     H     N+  E +VLI GAGPIG++ +  A+  GA  +VI D++DYRL +A+++GA   V VS  +L+D+  ++      M  G DV  + +G     ++ L +   GGKV L+G+
Sbjct:  119 GAFAEYLAIPAFNAFKIPPEISDDLAAIFDPFGNATHTALSFNLVGE-DVLITGAGPIGVMAVAIAKHVGARNVVITDINDYRLELARKMGATRAVNVSRESLRDVMADLH-----MTEGFDVGLEMSGVPSAFTSLLESMNHGGKVALLGI 264          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_BURMS (L-threonine 3-dehydrogenase OS=Burkholderia mallei (strain SAVP1) GN=tdh PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.088e-16
Identity = 51/152 (33.55%), Postives = 83/152 (54.61%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            G+    +  PA   FK+P  +S +  A+ +P     H     N+  E +VLI GAGPIG++ +  A+  GA  +VI D++DYRL +A+++GA   V VS  +L+D+  ++      M  G DV  + +G     ++ L +   GGKV L+G+
Sbjct:  119 GAFAEYLAIPAFNAFKIPPEISDDLAAIFDPFGNATHTALSFNLVGE-DVLITGAGPIGVMAVAIAKHVGARNVVITDINDYRLELARKMGATRAVNVSRESLRDVMADLH-----MTEGFDVGLEMSGVPSAFTSLLESMNHGGKVALLGI 264          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_BURMA (L-threonine 3-dehydrogenase OS=Burkholderia mallei GN=tdh PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.088e-16
Identity = 51/152 (33.55%), Postives = 83/152 (54.61%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            G+    +  PA   FK+P  +S +  A+ +P     H     N+  E +VLI GAGPIG++ +  A+  GA  +VI D++DYRL +A+++GA   V VS  +L+D+  ++      M  G DV  + +G     ++ L +   GGKV L+G+
Sbjct:  119 GAFAEYLAIPAFNAFKIPPEISDDLAAIFDPFGNATHTALSFNLVGE-DVLITGAGPIGVMAVAIAKHVGARNVVITDINDYRLELARKMGATRAVNVSRESLRDVMADLH-----MTEGFDVGLEMSGVPSAFTSLLESMNHGGKVALLGI 264          
The following BLAST results are available for this feature:
BLAST of EY659470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 209
Match NameE-valueIdentityDescription
TDH_SHESH4.661e-1632.08L-threonine 3-dehydrogenase OS=Shewanella sedimini... [more]
TDH_CHRVO4.661e-1634.21L-threonine 3-dehydrogenase OS=Chromobacterium vio... [more]
TDH_BURVG4.661e-1633.55L-threonine 3-dehydrogenase OS=Burkholderia vietna... [more]
ADH_RALEU4.699e-1633.33Alcohol dehydrogenase OS=Ralstonia eutropha GN=adh... [more]
TDH_BURPS6.088e-1633.55L-threonine 3-dehydrogenase OS=Burkholderia pseudo... [more]
TDH_BURP66.088e-1633.55L-threonine 3-dehydrogenase OS=Burkholderia pseudo... [more]
TDH_BURP16.088e-1633.55L-threonine 3-dehydrogenase OS=Burkholderia pseudo... [more]
TDH_BURP06.088e-1633.55L-threonine 3-dehydrogenase OS=Burkholderia pseudo... [more]
TDH_BURMS6.088e-1633.55L-threonine 3-dehydrogenase OS=Burkholderia mallei... [more]
TDH_BURMA6.088e-1633.55L-threonine 3-dehydrogenase OS=Burkholderia mallei... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-E04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659470 ID=EY659470; Name=EY659470; organism=Citrus sinensis; type=EST; length=917bp
AAATTTTTTTTTTCTCCGCCCGTTCATGGTTCCCTGCCTAATCAGGTGGT
GCATCCTGCAGACCTATGTTTTAAGCTGCCGGACAATGTGAGCCTGGAGG
AAGGGGCTATGTGTGAGCCCTTGAGTGTTGGTCTTCATGCCTGCCGCCGT
GCCAATATCGGTCCTGAGACAAATGTGCTTATCATGGGAGCAGGGCCCAT
AGGACTTGTCACAATGCTAGGAGCTCGTGCTTTTGGAGCTCCTAGAATTG
TCATTGTGGATGTGGATGACTATCGTTTATCTGTTGCAAAGGAACTTGGT
GCAGATAATATTGTTAAAGTTTCAACAAATTTGCAGGACATAGCTGAAGA
AGTGGAAAAGATACAGAAAGCCATGGGGACAGGAATAGATGTGAGCTTTG
ATTGTGCAGGCTTTAACAAAACCATGTCAACAGCACTGAGTGCTACTCGT
GCAGGTGGTAAAGTTTGCCTCGTGGGGATGGGTCATCATGAAATGACTGT
CCCACTCACTCCGGCTGCTGCAAGGGATGTGGATGTGGTGGGGGGTGTTT
CGCTACATGAACACCTGGCCACTGTGTCTGGAGTTCCTTANAAGCGGAAA
GATTGATGTAAAGCCCCTTATCACGCATAGGGTTTGGTTTCTNCCAGAAA
GAAGTGGAAGAAGGCCTTGAAACAGTGCTCGTGGTGGTACTGGCATCAAA
GTCATGTTTAATCTGTAAATACAACGTAAGTAAACGTTTGGGCAAAGATG
AAATAAAATGAATTGCCGCCGAGTATATGAATAAAAGGGTAGCTATACTT
ATTTCTATCTATTACAAAATAAATCAGATTTCTCAAAAAAAAAAAAAAGG
CCGGCCGCTTATAAGATACAGCTTATACCCTGGCTGCAACGTTTAACTTT
TTATATGGCACCTAATT
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