EY659470

Overview
NameEY659470
Unique NameEY659470
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length917
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_BURM9 (L-threonine 3-dehydrogenase OS=Burkholderia mallei (strain NCTC 10229) GN=tdh PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.088e-16
Identity = 51/152 (33.55%), Postives = 83/152 (54.61%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            G+    +  PA   FK+P  +S +  A+ +P     H     N+  E +VLI GAGPIG++ +  A+  GA  +VI D++DYRL +A+++GA   V VS  +L+D+  ++      M  G DV  + +G     ++ L +   GGKV L+G+
Sbjct:  119 GAFAEYLAIPAFNAFKIPPEISDDLAAIFDPFGNATHTALSFNLVGE-DVLITGAGPIGVMAVAIAKHVGARNVVITDINDYRLELARKMGATRAVNVSRESLRDVMADLH-----MTEGFDVGLEMSGVPSAFTSLLESMNHGGKVALLGI 264          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_BURM7 (L-threonine 3-dehydrogenase OS=Burkholderia mallei (strain NCTC 10247) GN=tdh PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.088e-16
Identity = 51/152 (33.55%), Postives = 83/152 (54.61%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            G+    +  PA   FK+P  +S +  A+ +P     H     N+  E +VLI GAGPIG++ +  A+  GA  +VI D++DYRL +A+++GA   V VS  +L+D+  ++      M  G DV  + +G     ++ L +   GGKV L+G+
Sbjct:  119 GAFAEYLAIPAFNAFKIPPEISDDLAAIFDPFGNATHTALSFNLVGE-DVLITGAGPIGVMAVAIAKHVGARNVVITDINDYRLELARKMGATRAVNVSRESLRDVMADLH-----MTEGFDVGLEMSGVPSAFTSLLESMNHGGKVALLGI 264          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_ANASK (L-threonine 3-dehydrogenase OS=Anaeromyxobacter sp. (strain K) GN=tdh PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.088e-16
Identity = 51/152 (33.55%), Postives = 81/152 (53.29%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            GS    VV PAD  +++PD++  +  A+ +P     H     ++  E +VL+ GAGPIG++    AR  GA  +V+ DV+DYRL +A+ +GA   V V+  +L+ +  E+      M  G DV  + +G  +     L     GGKV L+G+
Sbjct:  120 GSFAEYVVIPADNVYRIPDDIPDDIAAIFDPFGNATHTALSFDLVGE-DVLVTGAGPIGVMAAAIARHVGARHVVVTDVNDYRLDLARRMGASRAVNVAKEDLRAVMSEL-----GMREGFDVGLEMSGNGRAFRQLLEVMNHGGKVALLGI 265          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_ANAD2 (L-threonine 3-dehydrogenase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=tdh PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.088e-16
Identity = 51/152 (33.55%), Postives = 81/152 (53.29%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            GS    VV PAD  +++PD++  +  A+ +P     H     ++  E +VL+ GAGPIG++    AR  GA  +V+ DV+DYRL +A+ +GA   V V+  +L+ +  E+      M  G DV  + +G  +     L     GGKV L+G+
Sbjct:  120 GSFAEYVVIPADNVYRIPDDIPDDIAAIFDPFGNATHTALSFDLVGE-DVLVTGAGPIGVMAAAIARHVGARHVVVTDVNDYRLDLARRMGASRAVNVAKEDLRAVMSEL-----GMREGFDVGLEMSGNGRAFRQLLEVMNHGGKVALLGI 265          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_SHIDS (L-threonine 3-dehydrogenase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=tdh PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 6.121e-16
Identity = 49/162 (30.25%), Postives = 84/162 (51.85%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT 510
            G     +V PA   FK+P N+S +  ++ +P    +H     ++  E +VL+ GAGPIG++    A+  GA  +VI DV++YRL +A+++G      V+  NL D+  E+      M  G DV  + +G      T L     GG++ ++G+   +M++  T
Sbjct:  119 GCFAEYLVIPAFNAFKIPGNISDDLASIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMGITRAANVAKENLNDVMAEL-----GMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLGIPPSDMSIDWT 274          

HSP 2 Score: 22.7126 bits (47), Expect = 6.121e-16
Identity = 10/23 (43.48%), Postives = 14/23 (60.87%), Query Frame = 2
Query:  563 TWPLCLEFLXSGKIDVKPLITHR 631
            TW      + SG +D+ P+ITHR
Sbjct:  294 TWYKMAALIQSG-LDLSPIITHR 315          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_VIBF1 (L-threonine 3-dehydrogenase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=tdh PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.951e-16
Identity = 52/159 (32.70%), Postives = 86/159 (54.09%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV-STNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTV 501
            G+    +V PA   FK+P  +S +  ++ +P    +H     ++  E +VLI GAGPIG++    A+  GA  +VI DV++YRL +AK++G    V V +  L+D+  E+      M  G DV  + +G     ++ L+    GGK+ L+G+   +MTV
Sbjct:  121 GAFSEYLVIPAFNAFKIPAGISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLDLAKKMGVTRAVNVMNEKLEDVMSEL-----GMTEGFDVGLEMSGNPSAFNSMLTNMNHGGKISLLGIPPSDMTV 273          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_DEIRA (L-threonine 3-dehydrogenase OS=Deinococcus radiodurans GN=tdh PE=3 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 7.951e-16
Identity = 54/159 (33.96%), Postives = 84/159 (52.83%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTV 501
            GS    +V PA   FKLPD++  +  A+ +P    +H     ++  E +VLI GAGPIG +    AR  GA  +VI DV+DYRL +A+++G    V V+  +L  +A +    +  M  G DV  + +G     +  +S    GGKV L+G+   E+ +
Sbjct:  119 GSFAEYLVLPAFNAFKLPDDIPDDVAAIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGCMAAAVARHVGARNVVITDVNDYRLDLARQMGVTRAVNVAREDLWTVATQ----ELDMHEGFDVGMEMSGSGPAFAQMVSVMNNGGKVALLGIPSGEVQI 272          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_BURTA (L-threonine 3-dehydrogenase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=tdh PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.951e-16
Identity = 51/152 (33.55%), Postives = 82/152 (53.95%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            G+    +  PA   FK+P  +S +  A+ +P     H     N+  E +VLI GAGPIG++ +  A+  GA  +VI D++DYRL +A+ +GA   V VS  +L+D+  ++      M  G DV  + +G     ++ L +   GGKV L+G+
Sbjct:  119 GAFAEYLAIPAFNAFKIPPEISDDLAAIFDPFGNATHTALSFNLVGE-DVLITGAGPIGVMAVAIAKHVGARNVVITDINDYRLDLARRMGATRAVNVSRESLRDVMADLH-----MTEGFDVGLEMSGVPSAFTSLLESMNHGGKVALLGI 264          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_BURS3 (L-threonine 3-dehydrogenase OS=Burkholderia sp. (strain 383) GN=tdh PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.951e-16
Identity = 50/152 (32.89%), Postives = 83/152 (54.61%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            G+    +  PA   FK+P  +S +  ++ +P     H     N+  E +VLI GAGPIG++ +  A+  GA  +VI D++DYRL +A+++GA   V V+  +L+D+  ++      M  G DV  + +G     ++ L A   GGKV L+G+
Sbjct:  119 GAFAEYLAIPAFNAFKIPPEISDDLASIFDPFGNATHTALSFNLVGE-DVLITGAGPIGIMAVAIAKHVGARNVVITDINDYRLELARKMGATRAVNVARESLRDVMSDLH-----MTEGFDVGLEMSGVPSAFTSMLEAMNHGGKVALLGI 264          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_CITK8 (L-threonine 3-dehydrogenase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=tdh PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.955e-16
Identity = 49/162 (30.25%), Postives = 85/162 (52.47%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT 510
            G     +V PA   FK+PDN+S +  ++ +P    +H     ++  E +VL+ GAGPIG++    A+  GA  +VI DV++YRL +A+++G  + V V+  NL D+   +      M  G DV  + +G        L     GG++ ++G+   +M++  T
Sbjct:  119 GCFAEYLVLPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGIIHTVNVAKENLTDVMANL-----GMTEGFDVGLEMSGAPPAFRAMLDTMNHGGRIAMLGIPPSDMSIDWT 274          

HSP 2 Score: 22.7126 bits (47), Expect = 7.955e-16
Identity = 10/23 (43.48%), Postives = 14/23 (60.87%), Query Frame = 2
Query:  563 TWPLCLEFLXSGKIDVKPLITHR 631
            TW      + SG +D+ P+ITHR
Sbjct:  294 TWYKMAALIQSG-LDLSPIITHR 315          
The following BLAST results are available for this feature:
BLAST of EY659470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 209
Match NameE-valueIdentityDescription
TDH_BURM96.088e-1633.55L-threonine 3-dehydrogenase OS=Burkholderia mallei... [more]
TDH_BURM76.088e-1633.55L-threonine 3-dehydrogenase OS=Burkholderia mallei... [more]
TDH_ANASK6.088e-1633.55L-threonine 3-dehydrogenase OS=Anaeromyxobacter sp... [more]
TDH_ANAD26.088e-1633.55L-threonine 3-dehydrogenase OS=Anaeromyxobacter de... [more]
TDH_SHIDS6.121e-1630.25L-threonine 3-dehydrogenase OS=Shigella dysenteria... [more]
TDH_VIBF17.951e-1632.70L-threonine 3-dehydrogenase OS=Vibrio fischeri (st... [more]
TDH_DEIRA7.951e-1633.96L-threonine 3-dehydrogenase OS=Deinococcus radiodu... [more]
TDH_BURTA7.951e-1633.55L-threonine 3-dehydrogenase OS=Burkholderia thaila... [more]
TDH_BURS37.951e-1632.89L-threonine 3-dehydrogenase OS=Burkholderia sp. (s... [more]
TDH_CITK87.955e-1630.25L-threonine 3-dehydrogenase OS=Citrobacter koseri ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-E04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659470 ID=EY659470; Name=EY659470; organism=Citrus sinensis; type=EST; length=917bp
AAATTTTTTTTTTCTCCGCCCGTTCATGGTTCCCTGCCTAATCAGGTGGT
GCATCCTGCAGACCTATGTTTTAAGCTGCCGGACAATGTGAGCCTGGAGG
AAGGGGCTATGTGTGAGCCCTTGAGTGTTGGTCTTCATGCCTGCCGCCGT
GCCAATATCGGTCCTGAGACAAATGTGCTTATCATGGGAGCAGGGCCCAT
AGGACTTGTCACAATGCTAGGAGCTCGTGCTTTTGGAGCTCCTAGAATTG
TCATTGTGGATGTGGATGACTATCGTTTATCTGTTGCAAAGGAACTTGGT
GCAGATAATATTGTTAAAGTTTCAACAAATTTGCAGGACATAGCTGAAGA
AGTGGAAAAGATACAGAAAGCCATGGGGACAGGAATAGATGTGAGCTTTG
ATTGTGCAGGCTTTAACAAAACCATGTCAACAGCACTGAGTGCTACTCGT
GCAGGTGGTAAAGTTTGCCTCGTGGGGATGGGTCATCATGAAATGACTGT
CCCACTCACTCCGGCTGCTGCAAGGGATGTGGATGTGGTGGGGGGTGTTT
CGCTACATGAACACCTGGCCACTGTGTCTGGAGTTCCTTANAAGCGGAAA
GATTGATGTAAAGCCCCTTATCACGCATAGGGTTTGGTTTCTNCCAGAAA
GAAGTGGAAGAAGGCCTTGAAACAGTGCTCGTGGTGGTACTGGCATCAAA
GTCATGTTTAATCTGTAAATACAACGTAAGTAAACGTTTGGGCAAAGATG
AAATAAAATGAATTGCCGCCGAGTATATGAATAAAAGGGTAGCTATACTT
ATTTCTATCTATTACAAAATAAATCAGATTTCTCAAAAAAAAAAAAAAGG
CCGGCCGCTTATAAGATACAGCTTATACCCTGGCTGCAACGTTTAACTTT
TTATATGGCACCTAATT
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