EY659470

Overview
NameEY659470
Unique NameEY659470
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length917
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_RHILW (L-threonine 3-dehydrogenase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=tdh PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.033e-15
Identity = 46/152 (30.26%), Postives = 82/152 (53.95%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            GS    V  P      +P+++S E  A+ +P    +H     ++  E +VL+ GAGPIG++  L A+  GA ++VI D++ +RL++A++LG D++V  S+ NL D+ + +      M  G DV  + +G        +     GGK+ ++G+
Sbjct:  123 GSFGEFVCIPESNVVAIPEDISDEIAAIFDPFGNAVHTALSFDLVGE-DVLVTGAGPIGIMGALVAKRSGARKVVITDINPHRLALARKLGIDHVVDASSENLADVMKSI-----GMTEGFDVGLEMSGAAPAFRDMIDKMNNGGKIAILGI 268          

HSP 2 Score: 26.9498 bits (58), Expect = 1.033e-15
Identity = 22/72 (30.56%), Postives = 32/72 (44.44%), Query Frame = 2
Query:  473 WGWVIMK*LSHSLRLLQGMWMWWGVFRYMNTWPLCLEFLXSGKIDVKPLITHRVWFLPERSGRRP*NSARGG 688
            W  VI K L+  L+ + G  M+        TW   + F+  G +D+ P+ITHR+     R G     S   G
Sbjct:  277 WNKVIFKMLN--LKGIYGREMF-------ETWYKMIAFVQGG-LDLAPIITHRIGIDEFRDGFEAMRSGNSG 338          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_RHIL3 (L-threonine 3-dehydrogenase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=tdh PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.033e-15
Identity = 47/152 (30.92%), Postives = 80/152 (52.63%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            GS    V  P      +PD++S E  A+ +P    +H     ++  E +VL+ GAGPIG++  L A+  GA ++VI D++ +RL +A++LG D++V  S  NL D+ + +      M  G DV  + +G        +     GGK+ ++G+
Sbjct:  123 GSFGEFVCIPESNVVPIPDDISDEIAAIFDPFGNAVHTALSFDLVGE-DVLVTGAGPIGIMGALVAKRSGARKVVITDINPHRLELARKLGIDHVVDASKENLADVMKAI-----GMTEGFDVGLEMSGAAPAFRDMIDKMNNGGKIAILGI 268          

HSP 2 Score: 26.9498 bits (58), Expect = 1.033e-15
Identity = 22/72 (30.56%), Postives = 32/72 (44.44%), Query Frame = 2
Query:  473 WGWVIMK*LSHSLRLLQGMWMWWGVFRYMNTWPLCLEFLXSGKIDVKPLITHRVWFLPERSGRRP*NSARGG 688
            W  VI K L+  L+ + G  M+        TW   + F+  G +D+ P+ITHR+     R G     S   G
Sbjct:  277 WNKVIFKMLN--LKGIYGREMF-------ETWYKMIAFVQGG-LDLAPIITHRIGIDDFRDGFEAMRSGNSG 338          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_RHIEC (L-threonine 3-dehydrogenase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=tdh PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.033e-15
Identity = 47/152 (30.92%), Postives = 80/152 (52.63%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            GS    V  P      +PD++S E  A+ +P    +H     ++  E +VL+ GAGPIG++  L A+  GA ++VI D++ +RL +A++LG D++V  S  NL D+ + +      M  G DV  + +G        +     GGK+ ++G+
Sbjct:  123 GSFGEFVCIPESNVVPIPDDISDEIAAIFDPFGNAVHTALSFDLVGE-DVLVTGAGPIGIMGALVAKRSGARKVVITDINPHRLDLARKLGIDHVVDASKENLADVMKAI-----GMTEGFDVGLEMSGAAPAFRDMIDKMNNGGKIAILGI 268          

HSP 2 Score: 26.9498 bits (58), Expect = 1.033e-15
Identity = 22/72 (30.56%), Postives = 32/72 (44.44%), Query Frame = 2
Query:  473 WGWVIMK*LSHSLRLLQGMWMWWGVFRYMNTWPLCLEFLXSGKIDVKPLITHRVWFLPERSGRRP*NSARGG 688
            W  VI K L+  L+ + G  M+        TW   + F+  G +D+ P+ITHR+     R G     S   G
Sbjct:  277 WNKVIFKMLN--LKGIYGREMF-------ETWYKMIAFVQGG-LDLSPIITHRIKIDDFRDGFEAMRSGNSG 338          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_RHIE6 (L-threonine 3-dehydrogenase OS=Rhizobium etli (strain CIAT 652) GN=tdh PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.033e-15
Identity = 47/152 (30.92%), Postives = 80/152 (52.63%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            GS    V  P      +PD++S E  A+ +P    +H     ++  E +VL+ GAGPIG++  L A+  GA ++VI D++ +RL +A++LG D++V  S  NL D+ + +      M  G DV  + +G        +     GGK+ ++G+
Sbjct:  123 GSFGEFVCIPESNVVPIPDDISDEIAAIFDPFGNAVHTALSFDLVGE-DVLVTGAGPIGIMGALVAKRSGARKVVITDINPHRLDLARKLGIDHVVDASKENLADVMKAI-----GMTEGFDVGLEMSGAAPAFRDMIDKMNNGGKIAILGI 268          

HSP 2 Score: 26.9498 bits (58), Expect = 1.033e-15
Identity = 22/72 (30.56%), Postives = 32/72 (44.44%), Query Frame = 2
Query:  473 WGWVIMK*LSHSLRLLQGMWMWWGVFRYMNTWPLCLEFLXSGKIDVKPLITHRVWFLPERSGRRP*NSARGG 688
            W  VI K L+  L+ + G  M+        TW   + F+  G +D+ P+ITHR+     R G     S   G
Sbjct:  277 WNKVIFKMLN--LKGIYGREMF-------ETWYKMIAFVQGG-LDLSPIITHRIKIDDFRDGFEAMRSGNSG 338          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: Y053_HAEIN (Uncharacterized zinc-type alcohol dehydrogenase-like protein HI0053 OS=Haemophilus influenzae GN=HI0053 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.038e-15
Identity = 50/161 (31.06%), Postives = 87/161 (54.04%), Query Frame = 1
Query:   22 VHGSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVP 504
            + G +   + HPA L  K+PDN+ + +  + EPL++ LHA  R  +    +++I+GAG IGL+  L A  +GA  I +VD+ + RL  AK LG ++I  V+ + +D  + +++I    G   +V  + +G N ++   L      G++ L G    E  +P
Sbjct:  118 IDGGMQEVIRHPAHLLTKVPDNLPIHQLPLAEPLTIALHALHRTTLKSGEHIVIIGAGAIGLMAALAAVQYGAIPI-LVDILEQRLEYAKSLGIEHI--VNPHKEDDIKRIKEI--TSGRMAEVVMEASGANISIKNTLHYASFAGRIALTGWPKTETPLP 273          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_PSEA6 (L-threonine 3-dehydrogenase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=tdh PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.038e-15
Identity = 51/159 (32.08%), Postives = 85/159 (53.46%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTV 501
            G+    +  PA   FK+PDN+S +  A+ +P    +H     ++  E +VLI GAGPIG++    A+  GA  +VI DV++YRL +A+++GA   V V+  +L+D+  ++      M  G DV  + +G        L     GGKV ++G+   ++ V
Sbjct:  119 GAFAEYLSIPAFNAFKIPDNISDDLAAIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVAQHVGARHVVITDVNEYRLDLARKMGASRAVNVAKESLKDVMNDL-----GMSEGFDVGLEMSGVPAAFRDMLDKMNHGGKVAMLGIPSGDVAV 271          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_BURM1 (L-threonine 3-dehydrogenase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=tdh PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.038e-15
Identity = 50/152 (32.89%), Postives = 83/152 (54.61%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            G+    +  PA   FK+P  +S +  ++ +P     H     N+  E +VLI GAGPIG++ +  A+  GA  +VI D++DYRL +A+++GA   V V+  +L+D+  ++      M  G DV  + +G     ++ L A   GGKV L+G+
Sbjct:  119 GAFAEYLAIPAFNAFKIPPEISDDLASIFDPFGNATHTALSFNLVGE-DVLITGAGPIGIMAVAIAKHVGARNVVITDINDYRLELARKMGATRAVNVARESLRDVMADLR-----MTEGFDVGLEMSGVPSAFTSLLEAMNHGGKVALLGI 264          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_BURCJ (L-threonine 3-dehydrogenase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=tdh PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.038e-15
Identity = 50/152 (32.89%), Postives = 83/152 (54.61%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            G+    +  PA   FK+P  +S +  ++ +P     H     N+  E +VLI GAGPIG++ +  A+  GA  +VI D++DYRL +A+++GA   V V+  +L+D+  ++      M  G DV  + +G     ++ L A   GGKV L+G+
Sbjct:  119 GAFAEYLAIPAFNAFKIPPEISDDLASIFDPFGNATHTALSFNLVGE-DVLITGAGPIGIMAVAIAKHVGARNVVITDINDYRLELARKMGATRAVNVARESLRDVMADLH-----MTEGFDVGLEMSGVPSAFTSLLEAMNHGGKVALLGI 264          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_BURCH (L-threonine 3-dehydrogenase OS=Burkholderia cenocepacia (strain HI2424) GN=tdh PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.038e-15
Identity = 50/152 (32.89%), Postives = 83/152 (54.61%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            G+    +  PA   FK+P  +S +  ++ +P     H     N+  E +VLI GAGPIG++ +  A+  GA  +VI D++DYRL +A+++GA   V V+  +L+D+  ++      M  G DV  + +G     ++ L A   GGKV L+G+
Sbjct:  119 GAFAEYLAIPAFNAFKIPPEISDDLASIFDPFGNATHTALSFNLVGE-DVLITGAGPIGIMAVAIAKHVGARNVVITDINDYRLELARKMGATRAVNVARESLRDVMADLH-----MTEGFDVGLEMSGVPSAFTSLLEAMNHGGKVALLGI 264          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_BURCC (L-threonine 3-dehydrogenase OS=Burkholderia cenocepacia (strain MC0-3) GN=tdh PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.038e-15
Identity = 50/152 (32.89%), Postives = 83/152 (54.61%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            G+    +  PA   FK+P  +S +  ++ +P     H     N+  E +VLI GAGPIG++ +  A+  GA  +VI D++DYRL +A+++GA   V V+  +L+D+  ++      M  G DV  + +G     ++ L A   GGKV L+G+
Sbjct:  119 GAFAEYLAIPAFNAFKIPPEISDDLASIFDPFGNATHTALSFNLVGE-DVLITGAGPIGIMAVAIAKHVGARNVVITDINDYRLELARKMGATRAVNVARESLRDVMADLH-----MTEGFDVGLEMSGVPSAFTSLLEAMNHGGKVALLGI 264          
The following BLAST results are available for this feature:
BLAST of EY659470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 209
Match NameE-valueIdentityDescription
TDH_RHILW1.033e-1530.26L-threonine 3-dehydrogenase OS=Rhizobium leguminos... [more]
TDH_RHIL31.033e-1530.92L-threonine 3-dehydrogenase OS=Rhizobium leguminos... [more]
TDH_RHIEC1.033e-1530.92L-threonine 3-dehydrogenase OS=Rhizobium etli (str... [more]
TDH_RHIE61.033e-1530.92L-threonine 3-dehydrogenase OS=Rhizobium etli (str... [more]
Y053_HAEIN1.038e-1531.06Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
TDH_PSEA61.038e-1532.08L-threonine 3-dehydrogenase OS=Pseudoalteromonas a... [more]
TDH_BURM11.038e-1532.89L-threonine 3-dehydrogenase OS=Burkholderia multiv... [more]
TDH_BURCJ1.038e-1532.89L-threonine 3-dehydrogenase OS=Burkholderia cepaci... [more]
TDH_BURCH1.038e-1532.89L-threonine 3-dehydrogenase OS=Burkholderia cenoce... [more]
TDH_BURCC1.038e-1532.89L-threonine 3-dehydrogenase OS=Burkholderia cenoce... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-E04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659470 ID=EY659470; Name=EY659470; organism=Citrus sinensis; type=EST; length=917bp
AAATTTTTTTTTTCTCCGCCCGTTCATGGTTCCCTGCCTAATCAGGTGGT
GCATCCTGCAGACCTATGTTTTAAGCTGCCGGACAATGTGAGCCTGGAGG
AAGGGGCTATGTGTGAGCCCTTGAGTGTTGGTCTTCATGCCTGCCGCCGT
GCCAATATCGGTCCTGAGACAAATGTGCTTATCATGGGAGCAGGGCCCAT
AGGACTTGTCACAATGCTAGGAGCTCGTGCTTTTGGAGCTCCTAGAATTG
TCATTGTGGATGTGGATGACTATCGTTTATCTGTTGCAAAGGAACTTGGT
GCAGATAATATTGTTAAAGTTTCAACAAATTTGCAGGACATAGCTGAAGA
AGTGGAAAAGATACAGAAAGCCATGGGGACAGGAATAGATGTGAGCTTTG
ATTGTGCAGGCTTTAACAAAACCATGTCAACAGCACTGAGTGCTACTCGT
GCAGGTGGTAAAGTTTGCCTCGTGGGGATGGGTCATCATGAAATGACTGT
CCCACTCACTCCGGCTGCTGCAAGGGATGTGGATGTGGTGGGGGGTGTTT
CGCTACATGAACACCTGGCCACTGTGTCTGGAGTTCCTTANAAGCGGAAA
GATTGATGTAAAGCCCCTTATCACGCATAGGGTTTGGTTTCTNCCAGAAA
GAAGTGGAAGAAGGCCTTGAAACAGTGCTCGTGGTGGTACTGGCATCAAA
GTCATGTTTAATCTGTAAATACAACGTAAGTAAACGTTTGGGCAAAGATG
AAATAAAATGAATTGCCGCCGAGTATATGAATAAAAGGGTAGCTATACTT
ATTTCTATCTATTACAAAATAAATCAGATTTCTCAAAAAAAAAAAAAAGG
CCGGCCGCTTATAAGATACAGCTTATACCCTGGCTGCAACGTTTAACTTT
TTATATGGCACCTAATT
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