EY659470

Overview
NameEY659470
Unique NameEY659470
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length917
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_BURCA (L-threonine 3-dehydrogenase OS=Burkholderia cenocepacia (strain AU 1054) GN=tdh PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.038e-15
Identity = 50/152 (32.89%), Postives = 83/152 (54.61%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            G+    +  PA   FK+P  +S +  ++ +P     H     N+  E +VLI GAGPIG++ +  A+  GA  +VI D++DYRL +A+++GA   V V+  +L+D+  ++      M  G DV  + +G     ++ L A   GGKV L+G+
Sbjct:  119 GAFAEYLAIPAFNAFKIPPEISDDLASIFDPFGNATHTALSFNLVGE-DVLITGAGPIGIMAVAIAKHVGARNVVITDINDYRLELARKMGATRAVNVARESLRDVMADLH-----MTEGFDVGLEMSGVPSAFTSLLEAMNHGGKVALLGI 264          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_BURA4 (L-threonine 3-dehydrogenase OS=Burkholderia ambifaria (strain MC40-6) GN=tdh PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.038e-15
Identity = 51/152 (33.55%), Postives = 82/152 (53.95%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            G+    +  PA   FK+P  +S +  ++ +P     H     N+  E +VLI GAGPIG++    A+  GA  +VI D++DYRL +A+++GA   V VS  +L+D+  ++      M  G DV  + +G     ++ L A   GGKV L+G+
Sbjct:  119 GAFAEYLAIPAFNAFKIPPEISDDLASIFDPFGNATHTALSFNLVGE-DVLITGAGPIGVMAAAIAKHVGARNVVITDINDYRLELARKMGATRAVNVSRESLRDVMADLH-----MTEGFDVGLEMSGVPSAFTSMLEAMNHGGKVALLGI 264          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_BURCM (L-threonine 3-dehydrogenase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=tdh PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.356e-15
Identity = 50/152 (32.89%), Postives = 82/152 (53.95%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            G+    +  PA   FK+P  +S +  ++ +P     H     N+  E +VLI GAGPIG++    A+  GA  +VI D++DYRL +A+++GA   V VS  +L+D+  ++      M  G DV  + +G     ++ L A   GGK+ L+G+
Sbjct:  119 GAFAEYLAIPAFNAFKIPPEISDDLASIFDPFGNATHTALSFNLVGE-DVLITGAGPIGVMAAAIAKHVGARNVVITDINDYRLELARKMGATRAVNVSRESLRDVMADLH-----MTEGFDVGLEMSGVPSAFTSMLEAMNHGGKIALLGI 264          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_VIBFM (L-threonine 3-dehydrogenase OS=Vibrio fischeri (strain MJ11) GN=tdh PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.771e-15
Identity = 51/159 (32.08%), Postives = 86/159 (54.09%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV-STNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTV 501
            G+    +V PA   FK+P  +S +  ++ +P    +H     ++  E +VLI GAGPIG++    A+  GA  +VI DV++YRL +AK++G    V V +  L+D+  ++      M  G DV  + +G     ++ L+    GGK+ L+G+   +MTV
Sbjct:  121 GAFSEYLVIPAFNAFKIPAGISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLDLAKKMGVTRAVNVMNEKLEDVMSDL-----GMTEGFDVGLEMSGNPSAFNSMLTNMNHGGKISLLGIPPSDMTV 273          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_PHOPR (L-threonine 3-dehydrogenase OS=Photobacterium profundum GN=tdh PE=3 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.771e-15
Identity = 52/162 (32.10%), Postives = 86/162 (53.09%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT 510
            G+    +V PA   FK+P  +S +  ++ +P    +H     ++  E +VLI GAGPIG++    A+  GA  +VI DV++YRL +A+++G    V V+   L+D+  E+      M  G DV  + +G     +  L++   GGKV L+G+   +M V  T
Sbjct:  121 GAFAEFLVIPAFNAFKIPAGISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLDLARKMGVTRAVNVANEKLEDVMSEL-----GMTEGFDVGLEMSGVPSAFNGMLASMNHGGKVALLGIPPSDMAVDWT 276          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_ANADE (L-threonine 3-dehydrogenase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=tdh PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.771e-15
Identity = 49/152 (32.24%), Postives = 81/152 (53.29%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            GS    VV PAD  +++PD++  +  A+ +P     H     ++  E +VL+ GAGPIG++    AR  GA  +V+ DV+DYRL +A+ +GA   V V+  +L+ +  E+      M  G DV  + +G  +     L     GG++ L+G+
Sbjct:  120 GSFAEYVVIPADNVYRIPDDIPDDIAAIFDPFGNATHTALSFDLVGE-DVLVTGAGPIGVMAAAIARHVGARHVVVTDVNDYRLDLARRMGASRAVNVAREDLRAVMSEL-----GMREGFDVGLEMSGNGRAFRQLLEVMNHGGRIALLGI 265          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: YDJL_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein ydjL OS=Escherichia coli (strain K12) GN=ydjL PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.945e-15
Identity = 45/142 (31.69%), Postives = 78/142 (54.93%), Query Frame = 1
Query:   70 FKLPDNVSLEEGAMCEPLSVGLHA-CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD---YRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG 483
            +++PD V  E+ A+ +P+     +  +++   P  +V+++G GP+GL ++  AR  GA  IV+V + +    R  VAKELGA  +V  ST  +D+    ++I      G+ +  +C+G N  +  A+   R  G+V  VGMG
Sbjct:  142 WEIPDGVDYEDAAVLDPICNAYKSIAQQSKFLPGQDVVVIGTGPLGLFSVQMARIMGAVNIVVVGLQEDVAVRFPVAKELGATAVVNGST--EDVVARCQQICGKDNLGLVI--ECSGANIALKQAIEMLRPNGEVVRVGMG 279          

HSP 2 Score: 31.5722 bits (70), Expect = 2.945e-15
Identity = 14/32 (43.75%), Postives = 18/32 (56.25%), Query Frame = 2
Query:  563 TWPLCLEFLXSGKIDVKPLITHRVWFLPERSG 658
            +W   +  L SG I VKP+ITHR+     R G
Sbjct:  307 SWRNAIRLLASGAIKVKPMITHRIGLSQWREG 338          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_VIBPA (L-threonine 3-dehydrogenase OS=Vibrio parahaemolyticus GN=tdh PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.021e-15
Identity = 49/159 (30.82%), Postives = 86/159 (54.09%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTV 501
            G+    +V PA   FK+PD +S +  ++ +P    +H     ++  E +VLI GAGPIG++    A+  GA  +VI DV++YRL +A+++G    V V+   L+D+  E+      M  G DV  + +G     ++ L+    GG++ L+G+   +M +
Sbjct:  121 GAFAEYLVIPAFNAFKIPDEISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGVTRAVNVAEEKLEDVMAEL-----GMTEGFDVGLEMSGNPAAFNSMLTTMNHGGRIALLGIPPSDMGI 273          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_LEGPH (L-threonine 3-dehydrogenase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=tdh PE=3 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 3.021e-15
Identity = 50/159 (31.45%), Postives = 80/159 (50.31%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTV 501
            G     +  PA     LPDN++ E+ A+ +P     H     ++  E +VLI GAGPIG++     R  GA  +VI DV+D+RL +A+++G    V V    L D+A E+  ++     G DV  + +G    ++  + A   GG V L+G+   E  +
Sbjct:  119 GCFAEYLALPATNVIALPDNITEEQAAILDPFGNAAHCALAFDVVGE-DVLITGAGPIGIMAAAIVRHIGARHVVITDVNDHRLELARQMGVSRAVNVKYQKLSDVANELGMLE-----GFDVGLEMSGNPMALNDMMKAMNHGGHVALLGIPPQETPI 271          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_LEGPC (L-threonine 3-dehydrogenase OS=Legionella pneumophila (strain Corby) GN=tdh PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.021e-15
Identity = 50/159 (31.45%), Postives = 80/159 (50.31%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTV 501
            G     +  PA     LPDN++ E+ A+ +P     H     ++  E +VLI GAGPIG++     R  GA  +VI DV+D+RL +A+++G    V V    L D+A E+  ++     G DV  + +G    ++  + A   GG V L+G+   E  +
Sbjct:  119 GCFAEYLALPATNVIALPDNITEEQAAILDPFGNAAHCALAFDVVGE-DVLITGAGPIGIMAAAIVRHIGARHVVITDVNDHRLELARQMGVSRAVNVKYQKLSDVANELGMLE-----GFDVGLEMSGNPMALNDMMKAMNHGGHVALLGIPPQETPI 271          
The following BLAST results are available for this feature:
BLAST of EY659470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 209
Match NameE-valueIdentityDescription
TDH_BURCA1.038e-1532.89L-threonine 3-dehydrogenase OS=Burkholderia cenoce... [more]
TDH_BURA41.038e-1533.55L-threonine 3-dehydrogenase OS=Burkholderia ambifa... [more]
TDH_BURCM1.356e-1532.89L-threonine 3-dehydrogenase OS=Burkholderia ambifa... [more]
TDH_VIBFM1.771e-1532.08L-threonine 3-dehydrogenase OS=Vibrio fischeri (st... [more]
TDH_PHOPR1.771e-1532.10L-threonine 3-dehydrogenase OS=Photobacterium prof... [more]
TDH_ANADE1.771e-1532.24L-threonine 3-dehydrogenase OS=Anaeromyxobacter de... [more]
YDJL_ECOLI2.945e-1531.69Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
TDH_VIBPA3.021e-1530.82L-threonine 3-dehydrogenase OS=Vibrio parahaemolyt... [more]
TDH_LEGPH3.021e-1531.45L-threonine 3-dehydrogenase OS=Legionella pneumoph... [more]
TDH_LEGPC3.021e-1531.45L-threonine 3-dehydrogenase OS=Legionella pneumoph... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-E04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659470 ID=EY659470; Name=EY659470; organism=Citrus sinensis; type=EST; length=917bp
AAATTTTTTTTTTCTCCGCCCGTTCATGGTTCCCTGCCTAATCAGGTGGT
GCATCCTGCAGACCTATGTTTTAAGCTGCCGGACAATGTGAGCCTGGAGG
AAGGGGCTATGTGTGAGCCCTTGAGTGTTGGTCTTCATGCCTGCCGCCGT
GCCAATATCGGTCCTGAGACAAATGTGCTTATCATGGGAGCAGGGCCCAT
AGGACTTGTCACAATGCTAGGAGCTCGTGCTTTTGGAGCTCCTAGAATTG
TCATTGTGGATGTGGATGACTATCGTTTATCTGTTGCAAAGGAACTTGGT
GCAGATAATATTGTTAAAGTTTCAACAAATTTGCAGGACATAGCTGAAGA
AGTGGAAAAGATACAGAAAGCCATGGGGACAGGAATAGATGTGAGCTTTG
ATTGTGCAGGCTTTAACAAAACCATGTCAACAGCACTGAGTGCTACTCGT
GCAGGTGGTAAAGTTTGCCTCGTGGGGATGGGTCATCATGAAATGACTGT
CCCACTCACTCCGGCTGCTGCAAGGGATGTGGATGTGGTGGGGGGTGTTT
CGCTACATGAACACCTGGCCACTGTGTCTGGAGTTCCTTANAAGCGGAAA
GATTGATGTAAAGCCCCTTATCACGCATAGGGTTTGGTTTCTNCCAGAAA
GAAGTGGAAGAAGGCCTTGAAACAGTGCTCGTGGTGGTACTGGCATCAAA
GTCATGTTTAATCTGTAAATACAACGTAAGTAAACGTTTGGGCAAAGATG
AAATAAAATGAATTGCCGCCGAGTATATGAATAAAAGGGTAGCTATACTT
ATTTCTATCTATTACAAAATAAATCAGATTTCTCAAAAAAAAAAAAAAGG
CCGGCCGCTTATAAGATACAGCTTATACCCTGGCTGCAACGTTTAACTTT
TTATATGGCACCTAATT
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