EY659470

Overview
NameEY659470
Unique NameEY659470
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length917
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_DEIDV (L-threonine 3-dehydrogenase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=tdh PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.021e-15
Identity = 48/151 (31.79%), Postives = 80/151 (52.98%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            GS    +V PA   FKLPD++  +  A+ +P    +H     ++  E +VL+ GAGPIG++    AR  GA  +VI D++DYRL +A+++G    V V+   ++    V + +  M  G DV  + +G     +  +     GGK+ L+G+
Sbjct:  119 GSFAEYLVLPAFNAFKLPDDIPDDVAAIFDPFGNAVHTALSFDLVGE-DVLVTGAGPIGVMAAAVARHVGARNVVITDINDYRLDLARKMGVTRAVNVT---KEDLWSVARNELGMTEGFDVGLEMSGSGPAFAQMVDVMNNGGKIALLGI 265          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_AERHH (L-threonine 3-dehydrogenase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=tdh PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.021e-15
Identity = 52/159 (32.70%), Postives = 80/159 (50.31%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTV 501
            G+    +V PA   FKLPDNV  E  A+ +P    +H     ++  E +VLI GAGPIG++     R  GA  +VI DV++YRL +A+++GA   V V+   L  +  E+      M  G DV  + +G        +     GGK+ ++G+    M +
Sbjct:  119 GAFAEYLVIPAFNAFKLPDNVPDELAAIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVCRHVGARHVVITDVNEYRLELARKMGATRAVNVTKEQLSGVMSEL-----GMTEGFDVGLEMSGVPSAFQDMIDKMNHGGKIAMLGIPPATMAI 271          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: BDH2_YEAST (Probable (R,R)-butanediol dehydrogenase 2 OS=Saccharomyces cerevisiae GN=BDH2 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.021e-15
Identity = 52/157 (33.12%), Postives = 80/157 (50.96%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSA-TRAGGKVCLVGMGHHEM 495
            G    +VV     C+K+PD V L+  A+ +PL+V  HA R       +  LI+GAGPIGL T+L   A G   IV+ +    R  +A+++GA      +   ++  + +  I    G G D +FDC+G   T++ A+   T  G  V L   GHH++
Sbjct:  144 GGFAERVVMNESHCYKVPDFVPLDVAALIQPLAVCWHAIRVCEFKAGSTALIIGAGPIGLGTILALNAAGCKDIVVSEPAKVRRELAEKMGARVYDPTAHAAKESIDYLRSIADG-GDGFDYTFDCSGLEVTLNAAIQCLTFRGTAVNLAMWGHHKI 299          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_LEGPL (L-threonine 3-dehydrogenase OS=Legionella pneumophila (strain Lens) GN=tdh PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.946e-15
Identity = 50/159 (31.45%), Postives = 80/159 (50.31%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTV 501
            G     +  PA     LPDN++ E+ A+ +P     H     ++  E +VLI GAGPIG++     R  GA  +VI DV+D+RL +A+++G    V V    L D+A E+  ++     G DV  + +G    ++  + A   GG V L+G+   E  +
Sbjct:  119 GCFAEYLALPATNVIALPDNITEEQAAILDPFGNAAHCALAFDVVGE-DVLITGAGPIGIMAAAIVRHIGARHVVITDVNDHRLELARKMGVSRAVNVKYQKLSDVANELGMLE-----GFDVGLEMSGNPMALNDMMKAMNHGGHVALLGIPPQETPI 271          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_BACA2 (L-threonine 3-dehydrogenase OS=Bacillus amyloliquefaciens (strain FZB42) GN=tdh PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 4.978e-15
Identity = 49/161 (30.43%), Postives = 84/161 (52.17%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT 510
            GS    V  PA   +K P ++     ++ EPL   +H    ++     +  I+G GPIGL+ +  A+A GA RI  +D +DYRL++AK+LGA   + +S + +D  E ++ +    G GID+  + +G    ++  L     GG+  ++ +    +TV LT
Sbjct:  123 GSFAEYVKVPARNVWKNPADMDPAVASVQEPLGNAVHTVLESSQLAGGSAAIIGCGPIGLMAVAVAKAAGASRIAAIDKNDYRLALAKKLGA--TITISADKEDPLEVIDTL--TGGEGIDLVCEMSGHPAAIAQGLKMAANGGRFHMLSLPERPVTVDLT 279          

HSP 2 Score: 26.5646 bits (57), Expect = 4.978e-15
Identity = 10/28 (35.71%), Postives = 16/28 (57.14%), Query Frame = 2
Query:  551 RYMNTWPLCLEFLXSGKIDVKPLITHRV 634
            +   TW      L SG +D+ P+ITH++
Sbjct:  296 KMFETWRQVSHLLESGLVDLTPVITHQL 323          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_PYRFU (Probable L-threonine 3-dehydrogenase OS=Pyrococcus furiosus GN=tdh PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.467e-15
Identity = 48/157 (30.57%), Postives = 80/157 (50.96%), Query Frame = 1
Query:   10 FSPPVHGSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            F     G      V PA   +K P N+  E   + EPL   +       I  ++ VLI GAGP+GL+ +  A+A GA  +++ +  ++R ++AK++GAD ++      +D+ +EV  I    G G+DV  + +G  K +   L A    G+V L+G+
Sbjct:  117 FGVDTDGVFAEYAVVPAQNVWKNPKNIPPEYATLQEPLGNAVDTVLAGPIAGKS-VLITGAGPLGLLGIAVAKASGAYPVIVSEPSEFRRNLAKKVGADYVINPFE--EDVVKEVMDITD--GNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGL 268          

HSP 2 Score: 27.7202 bits (60), Expect = 6.467e-15
Identity = 10/23 (43.48%), Postives = 15/23 (65.22%), Query Frame = 2
Query:  563 TWPLCLEFLXSGKIDVKPLITHR 631
            TW      L SGK+++ P+ITH+
Sbjct:  299 TWYTVSRLLQSGKLNIDPIITHK 321          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_XANAC (L-threonine 3-dehydrogenase OS=Xanthomonas axonopodis pv. citri GN=tdh PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.731e-15
Identity = 47/154 (30.52%), Postives = 82/154 (53.25%), Query Frame = 1
Query:   22 VHGSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            V+G+    +V PA   + +PD +  E  A  +P     H     ++  E +VLI GAGPIG++     +  GA  +V+ DV+D+RL +A ++GA  +V VS T+L+D+  ++         G DV  + +G ++  +  L     GGK+ ++G+
Sbjct:  117 VNGAFAEYMVMPASNLWPIPDQIPSELAAFFDPYGNAAHCALEFDVIGE-DVLITGAGPIGIIAAGICKHIGARNVVVTDVNDFRLKLAADMGATRVVNVSKTSLKDVMADLHM------EGFDVGLEMSGNSRAFNDMLDCMYHGGKIAMLGI 263          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_LEGPA (L-threonine 3-dehydrogenase OS=Legionella pneumophila (strain Paris) GN=tdh PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.731e-15
Identity = 50/159 (31.45%), Postives = 80/159 (50.31%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTV 501
            G     +  PA     LPDN++ E+ A+ +P     H     ++  E +VLI GAGPIG++     R  GA  +VI DV+D+RL +A+++G    V V    L D+A E+  ++     G DV  + +G    ++  + A   GG V L+G+   E  +
Sbjct:  119 GCFAEYLALPATNVIALPDNITEEQAAILDPFGNAAHCALAFDVVGE-DVLITGAGPIGIMAAAIVRHIGARHVVITDVNDHRLELARQMGVSRAVNVKYQKLIDVANELGMLE-----GFDVGLEMSGNPMALNDMMKAMNHGGHVALLGIPPQETPI 271          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: BDHA_BACSU ((R,R)-butanediol dehydrogenase OS=Bacillus subtilis GN=bdhA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.731e-15
Identity = 49/151 (32.45%), Postives = 78/151 (51.66%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            G     V    +L FKLPD +S E+GA+ EP +V L+A R + +       + G GPIGL+ +   +A GA  I  V++   R   A+ELGA  I+   +   D+   V +I +  G G+DV+F+  G    +  A+ +T   G+  +V +
Sbjct:  123 GGFSEYVSVDEELLFKLPDELSYEQGALVEPSAVALYAVRSSKLKAGDKAAVFGCGPIGLLVIEALKAAGATDIYAVELSPERQQKAEELGA--IIVDPSKTDDV---VAEIAERTGGGVDVAFEVTGVPVVLRQAIQSTTIAGETVIVSI 268          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_PYRHO (Probable L-threonine 3-dehydrogenase OS=Pyrococcus horikoshii GN=tdh PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.403e-15
Identity = 49/164 (29.88%), Postives = 83/164 (50.61%), Query Frame = 1
Query:   10 FSPPVHGSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTV 501
            F     G      V PA   +K P ++  E   + EPL   +       I  ++ VLI GAGP+GL+ +  A+A GA  +++ +  D+R  +AK++GAD ++      +D+ +EV  I    G G+DV  + +G  K +   L A    G+V L+G+   ++T+
Sbjct:  117 FGVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGNAVDTVLAGPISGKS-VLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFE--EDVVKEVMDITD--GNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTI 275          

HSP 2 Score: 26.9498 bits (58), Expect = 8.403e-15
Identity = 10/23 (43.48%), Postives = 15/23 (65.22%), Query Frame = 2
Query:  563 TWPLCLEFLXSGKIDVKPLITHR 631
            TW      L SGK+++ P+ITH+
Sbjct:  299 TWYTVSRLLQSGKLNLDPIITHK 321          
The following BLAST results are available for this feature:
BLAST of EY659470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 209
Match NameE-valueIdentityDescription
TDH_DEIDV3.021e-1531.79L-threonine 3-dehydrogenase OS=Deinococcus deserti... [more]
TDH_AERHH3.021e-1532.70L-threonine 3-dehydrogenase OS=Aeromonas hydrophil... [more]
BDH2_YEAST3.021e-1533.12Probable (R,R)-butanediol dehydrogenase 2 OS=Sacch... [more]
TDH_LEGPL3.946e-1531.45L-threonine 3-dehydrogenase OS=Legionella pneumoph... [more]
TDH_BACA24.978e-1530.43L-threonine 3-dehydrogenase OS=Bacillus amylolique... [more]
TDH_PYRFU6.467e-1530.57Probable L-threonine 3-dehydrogenase OS=Pyrococcus... [more]
TDH_XANAC6.731e-1530.52L-threonine 3-dehydrogenase OS=Xanthomonas axonopo... [more]
TDH_LEGPA6.731e-1531.45L-threonine 3-dehydrogenase OS=Legionella pneumoph... [more]
BDHA_BACSU6.731e-1532.45(R,R)-butanediol dehydrogenase OS=Bacillus subtili... [more]
TDH_PYRHO8.403e-1529.88Probable L-threonine 3-dehydrogenase OS=Pyrococcus... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-E04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659470 ID=EY659470; Name=EY659470; organism=Citrus sinensis; type=EST; length=917bp
AAATTTTTTTTTTCTCCGCCCGTTCATGGTTCCCTGCCTAATCAGGTGGT
GCATCCTGCAGACCTATGTTTTAAGCTGCCGGACAATGTGAGCCTGGAGG
AAGGGGCTATGTGTGAGCCCTTGAGTGTTGGTCTTCATGCCTGCCGCCGT
GCCAATATCGGTCCTGAGACAAATGTGCTTATCATGGGAGCAGGGCCCAT
AGGACTTGTCACAATGCTAGGAGCTCGTGCTTTTGGAGCTCCTAGAATTG
TCATTGTGGATGTGGATGACTATCGTTTATCTGTTGCAAAGGAACTTGGT
GCAGATAATATTGTTAAAGTTTCAACAAATTTGCAGGACATAGCTGAAGA
AGTGGAAAAGATACAGAAAGCCATGGGGACAGGAATAGATGTGAGCTTTG
ATTGTGCAGGCTTTAACAAAACCATGTCAACAGCACTGAGTGCTACTCGT
GCAGGTGGTAAAGTTTGCCTCGTGGGGATGGGTCATCATGAAATGACTGT
CCCACTCACTCCGGCTGCTGCAAGGGATGTGGATGTGGTGGGGGGTGTTT
CGCTACATGAACACCTGGCCACTGTGTCTGGAGTTCCTTANAAGCGGAAA
GATTGATGTAAAGCCCCTTATCACGCATAGGGTTTGGTTTCTNCCAGAAA
GAAGTGGAAGAAGGCCTTGAAACAGTGCTCGTGGTGGTACTGGCATCAAA
GTCATGTTTAATCTGTAAATACAACGTAAGTAAACGTTTGGGCAAAGATG
AAATAAAATGAATTGCCGCCGAGTATATGAATAAAAGGGTAGCTATACTT
ATTTCTATCTATTACAAAATAAATCAGATTTCTCAAAAAAAAAAAAAAGG
CCGGCCGCTTATAAGATACAGCTTATACCCTGGCTGCAACGTTTAACTTT
TTATATGGCACCTAATT
back to top