EY659470

Overview
NameEY659470
Unique NameEY659470
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length917
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_AGRRK (L-threonine 3-dehydrogenase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=tdh PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 8.405e-15
Identity = 45/152 (29.61%), Postives = 78/152 (51.32%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            GS    V  P      +PD++  E  A+ +P    +H     ++  E +VL+ GAGPIG++  + A+  GA ++VI D++  RL++A +LG D++V  S  NL D+ + +      M  G DV  + +G        +     GGK+ ++G+
Sbjct:  123 GSFGEFVCIPESNVVPIPDDIPDEVAAIFDPFGNAVHTALSFDLVGE-DVLVTGAGPIGIMGAMVAKRSGARKVVITDINPNRLALAHKLGIDHVVDASKENLADVMKSI-----GMTEGFDVGLEMSGAAPAFRDMIDKMNNGGKIAILGI 268          

HSP 2 Score: 28.1054 bits (61), Expect = 8.405e-15
Identity = 23/72 (31.94%), Postives = 32/72 (44.44%), Query Frame = 2
Query:  473 WGWVIMK*LSHSLRLLQGMWMWWGVFRYMNTWPLCLEFLXSGKIDVKPLITHRVWFLPERSGRRP*NSARGG 688
            W  VI K L+  L+ + G  M+        TW   + F+  G +DV P+ITHR+     R G     S   G
Sbjct:  277 WNKVIFKMLN--LKGIYGREMF-------ETWYKMIAFVQGG-LDVSPVITHRIGIDDFREGFEAMRSGNSG 338          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_XANCP (L-threonine 3-dehydrogenase OS=Xanthomonas campestris pv. campestris GN=tdh PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.791e-15
Identity = 48/154 (31.17%), Postives = 81/154 (52.60%), Query Frame = 1
Query:   22 VHGSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            V+G+    +V PA   + +PD +  E  A  +P     H     ++  E +VLI GAGPIG++     +  GA  +V+ DV+D+RL +A +LGA  +V VS T+L+D+  ++         G DV  + +G  +  +  L     GGK+ ++G+
Sbjct:  117 VNGAFAEYMVMPASNLWPIPDQIPSELAAFFDPYGNAAHCALEFDVIGE-DVLITGAGPIGIIAAGICKHIGARNVVVTDVNDFRLKLAADLGATRVVNVSKTSLKDVMADLHM------EGFDVGLEMSGNPRAFNDMLDCMYHGGKIAMLGI 263          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_XANCB (L-threonine 3-dehydrogenase OS=Xanthomonas campestris pv. campestris (strain B100) GN=tdh PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.791e-15
Identity = 48/154 (31.17%), Postives = 81/154 (52.60%), Query Frame = 1
Query:   22 VHGSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            V+G+    +V PA   + +PD +  E  A  +P     H     ++  E +VLI GAGPIG++     +  GA  +V+ DV+D+RL +A +LGA  +V VS T+L+D+  ++         G DV  + +G  +  +  L     GGK+ ++G+
Sbjct:  117 VNGAFAEYMVMPASNLWPIPDQIPSELAAFFDPYGNAAHCALEFDVIGE-DVLITGAGPIGIIAAGICKHIGARNVVVTDVNDFRLKLAADLGATRVVNVSKTSLKDVMADLHM------EGFDVGLEMSGNPRAFNDMLDCMYHGGKIAMLGI 263          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_XANC8 (L-threonine 3-dehydrogenase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=tdh PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.791e-15
Identity = 48/154 (31.17%), Postives = 81/154 (52.60%), Query Frame = 1
Query:   22 VHGSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            V+G+    +V PA   + +PD +  E  A  +P     H     ++  E +VLI GAGPIG++     +  GA  +V+ DV+D+RL +A +LGA  +V VS T+L+D+  ++         G DV  + +G  +  +  L     GGK+ ++G+
Sbjct:  117 VNGAFAEYMVMPASNLWPIPDQIPSELAAFFDPYGNAAHCALEFDVIGE-DVLITGAGPIGIIAAGICKHIGARNVVVTDVNDFRLKLAADLGATRVVNVSKTSLKDVMADLHM------EGFDVGLEMSGNPRAFNDMLDCMYHGGKIAMLGI 263          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_STRMK (L-threonine 3-dehydrogenase OS=Stenotrophomonas maltophilia (strain K279a) GN=tdh PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.791e-15
Identity = 47/154 (30.52%), Postives = 81/154 (52.60%), Query Frame = 1
Query:   22 VHGSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            V+G+    +V PA   + +PD +  E  A  +P     H     N+  E +VLI GAGPIG++     +  GA  +V+ DV+D+RL +A ++GA  +V V+  +L+D+ +E+         G DV  + +G  +  +  L     GGK+ ++G+
Sbjct:  117 VNGAFAEYMVMPASNLWPIPDQIPSELAAFFDPYGNAAHCALEFNVIGE-DVLITGAGPIGIIAAGICKHIGARNVVVTDVNDFRLKLAADMGATRVVNVANQSLKDVMKELHM------EGFDVGLEMSGNPRAFNDMLDCMYHGGKIAMLGI 263          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: DOIAD_MICEC (2-deoxy-scyllo-inosamine dehydrogenase OS=Micromonospora echinospora GN=gacH PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.148e-14
Identity = 52/152 (34.21%), Postives = 76/152 (50.00%), Query Frame = 1
Query:   22 VHGSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG 477
            V G     V  P    + LP+ + L   +  EPL+V LHA  R N+ P   V ++GAG IG + +  ARA GA   +  D+   R  +A+E GA   V  S  L ++    +K        +DV F+ +G  +++  AL   R GG+VCLVG
Sbjct:  116 VDGGCAGYVAVPITNLYLLPEGMDLAAASQTEPLAVALHAVDRINLRPAERVAVLGAGGIGQLILQSARATGATVTLATDLVAERRKIAEESGAAAAVHPS-ELPELTSYADK--------VDVVFEASGDPESVVRALDLVRPGGRVCLVG 258          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_RHISN (L-threonine 3-dehydrogenase OS=Rhizobium sp. (strain NGR234) GN=tdh PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.419e-14
Identity = 47/152 (30.92%), Postives = 77/152 (50.66%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            GS    V  P      +PD+V  E  A+ +P    +H     ++  E +VL+ GAGPIG++  L A+  GA ++VI D++  RL +A++LG D++V  S  NL D+   +      M  G DV  + +G        +     GGK+ ++G+
Sbjct:  123 GSFAEFVCLPEYNVVTIPDDVPDEIAAIFDPFGNAVHTALSFDLVGE-DVLVTGAGPIGIMGALVAKRSGARKVVITDINPVRLDLARKLGIDHVVDASKENLADVMRSI-----GMTEGFDVGLEMSGAAPAFRDMIDKMNNGGKIAILGI 268          

HSP 2 Score: 26.5646 bits (57), Expect = 1.419e-14
Identity = 22/72 (30.56%), Postives = 32/72 (44.44%), Query Frame = 2
Query:  473 WGWVIMK*LSHSLRLLQGMWMWWGVFRYMNTWPLCLEFLXSGKIDVKPLITHRVWFLPERSGRRP*NSARGG 688
            W  VI K L+  L+ + G  M+        TW   + F+  G +D+ P+ITHR+     R G     S   G
Sbjct:  277 WNKVIFKMLN--LKGIYGREMF-------ETWYKMIAFVQGG-LDLAPVITHRIGIDAFRDGFEAMRSGNSG 338          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_XANOR (L-threonine 3-dehydrogenase OS=Xanthomonas oryzae pv. oryzae GN=tdh PE=3 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.499e-14
Identity = 47/154 (30.52%), Postives = 81/154 (52.60%), Query Frame = 1
Query:   22 VHGSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            V+G+    +V PA   + +PD +  E  A  +P     H     ++  E +VLI GAGPIG++     +  GA  +V+ DV+D+RL +A ++GA  +V VS T+L+D+  ++         G DV  + +G  +  +  L     GGK+ ++G+
Sbjct:  117 VNGAFAEYMVMPASNLWPIPDQIPSELAAFFDPYGNAAHCALEFDVIGE-DVLITGAGPIGIIAAGICKHIGARNVVVTDVNDFRLKLAADMGATRVVNVSKTSLKDVMADLHM------EGFDVGLEMSGNPRAFNDMLDCMYHGGKIAMLGI 263          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_XANOM (L-threonine 3-dehydrogenase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=tdh PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.499e-14
Identity = 47/154 (30.52%), Postives = 81/154 (52.60%), Query Frame = 1
Query:   22 VHGSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            V+G+    +V PA   + +PD +  E  A  +P     H     ++  E +VLI GAGPIG++     +  GA  +V+ DV+D+RL +A ++GA  +V VS T+L+D+  ++         G DV  + +G  +  +  L     GGK+ ++G+
Sbjct:  117 VNGAFAEYMVMPASNLWPIPDQIPSELAAFFDPYGNAAHCALEFDVIGE-DVLITGAGPIGIIAAGICKHIGARNVVVTDVNDFRLKLAADMGATRVVNVSKTSLKDVMADLHM------EGFDVGLEMSGNPRAFNDMLDCMYHGGKIAMLGI 263          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_VIBVU (L-threonine 3-dehydrogenase OS=Vibrio vulnificus GN=tdh PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.499e-14
Identity = 49/159 (30.82%), Postives = 83/159 (52.20%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTV 501
            G     +V PA   FK+P N+S +  ++ +P    +H     ++  E +VLI GAGPIG++    A+  GA  +VI DV++YRL +A+++G    V V+   L D+  E+      M  G DV  + +G     ++ L     GG++ L+G+   +M +
Sbjct:  121 GCFSEYLVIPAFNAFKIPANISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLDLARKMGVTRAVNVAEQKLDDVMAEL-----GMTEGFDVGLEMSGNPSAFNSMLKTMNHGGRIALLGIPPSDMGI 273          
The following BLAST results are available for this feature:
BLAST of EY659470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 209
Match NameE-valueIdentityDescription
TDH_AGRRK8.405e-1529.61L-threonine 3-dehydrogenase OS=Agrobacterium radio... [more]
TDH_XANCP8.791e-1531.17L-threonine 3-dehydrogenase OS=Xanthomonas campest... [more]
TDH_XANCB8.791e-1531.17L-threonine 3-dehydrogenase OS=Xanthomonas campest... [more]
TDH_XANC88.791e-1531.17L-threonine 3-dehydrogenase OS=Xanthomonas campest... [more]
TDH_STRMK8.791e-1530.52L-threonine 3-dehydrogenase OS=Stenotrophomonas ma... [more]
DOIAD_MICEC1.148e-1434.212-deoxy-scyllo-inosamine dehydrogenase OS=Micromon... [more]
TDH_RHISN1.419e-1430.92L-threonine 3-dehydrogenase OS=Rhizobium sp. (stra... [more]
TDH_XANOR1.499e-1430.52L-threonine 3-dehydrogenase OS=Xanthomonas oryzae ... [more]
TDH_XANOM1.499e-1430.52L-threonine 3-dehydrogenase OS=Xanthomonas oryzae ... [more]
TDH_VIBVU1.499e-1430.82L-threonine 3-dehydrogenase OS=Vibrio vulnificus G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-E04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659470 ID=EY659470; Name=EY659470; organism=Citrus sinensis; type=EST; length=917bp
AAATTTTTTTTTTCTCCGCCCGTTCATGGTTCCCTGCCTAATCAGGTGGT
GCATCCTGCAGACCTATGTTTTAAGCTGCCGGACAATGTGAGCCTGGAGG
AAGGGGCTATGTGTGAGCCCTTGAGTGTTGGTCTTCATGCCTGCCGCCGT
GCCAATATCGGTCCTGAGACAAATGTGCTTATCATGGGAGCAGGGCCCAT
AGGACTTGTCACAATGCTAGGAGCTCGTGCTTTTGGAGCTCCTAGAATTG
TCATTGTGGATGTGGATGACTATCGTTTATCTGTTGCAAAGGAACTTGGT
GCAGATAATATTGTTAAAGTTTCAACAAATTTGCAGGACATAGCTGAAGA
AGTGGAAAAGATACAGAAAGCCATGGGGACAGGAATAGATGTGAGCTTTG
ATTGTGCAGGCTTTAACAAAACCATGTCAACAGCACTGAGTGCTACTCGT
GCAGGTGGTAAAGTTTGCCTCGTGGGGATGGGTCATCATGAAATGACTGT
CCCACTCACTCCGGCTGCTGCAAGGGATGTGGATGTGGTGGGGGGTGTTT
CGCTACATGAACACCTGGCCACTGTGTCTGGAGTTCCTTANAAGCGGAAA
GATTGATGTAAAGCCCCTTATCACGCATAGGGTTTGGTTTCTNCCAGAAA
GAAGTGGAAGAAGGCCTTGAAACAGTGCTCGTGGTGGTACTGGCATCAAA
GTCATGTTTAATCTGTAAATACAACGTAAGTAAACGTTTGGGCAAAGATG
AAATAAAATGAATTGCCGCCGAGTATATGAATAAAAGGGTAGCTATACTT
ATTTCTATCTATTACAAAATAAATCAGATTTCTCAAAAAAAAAAAAAAGG
CCGGCCGCTTATAAGATACAGCTTATACCCTGGCTGCAACGTTTAACTTT
TTATATGGCACCTAATT
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