EY659470

Overview
NameEY659470
Unique NameEY659470
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length917
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_PYRAB (Probable L-threonine 3-dehydrogenase OS=Pyrococcus abyssi GN=tdh PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.843e-14
Identity = 48/157 (30.57%), Postives = 79/157 (50.32%), Query Frame = 1
Query:   10 FSPPVHGSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            F     G      V PA   +K P ++  E   + EPL   +       I  ++ VLI GAGP+GL+ +  A+A GA  +++ +  D+R  +AK++GAD ++      +D+ +EV  I    G G+DV  + +G  K +   L A    G+V L+G+
Sbjct:  117 FGVDTDGVFAEYAVVPAQNVWKNPKSIPPEYATLQEPLGNAVDTVLAGPISGKS-VLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFE--EDVVKEVMDITD--GNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGL 268          

HSP 2 Score: 26.9498 bits (58), Expect = 1.843e-14
Identity = 10/23 (43.48%), Postives = 15/23 (65.22%), Query Frame = 2
Query:  563 TWPLCLEFLXSGKIDVKPLITHR 631
            TW      L SGK+++ P+ITH+
Sbjct:  299 TWYTVSRLLQSGKLNLDPIITHK 321          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_XANC5 (L-threonine 3-dehydrogenase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=tdh PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.958e-14
Identity = 47/154 (30.52%), Postives = 81/154 (52.60%), Query Frame = 1
Query:   22 VHGSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            V+G+    +V PA   + +PD +  E  A  +P     H     ++  E +VLI GAGPIG++     +  GA  +V+ DV+D+RL +A ++GA  +V VS T+L+D+  ++         G DV  + +G  +  +  L     GGK+ ++G+
Sbjct:  117 VNGAFAEYMVMPASNLWLIPDQIPSELAAFFDPYGNAAHCALEFDVIGE-DVLITGAGPIGIIAAGICKHIGARNVVVTDVNDFRLKLAADMGATRVVNVSKTSLKDVMADLHM------EGFDVGLEMSGNPRAFNDMLDCMYHGGKIAMLGI 263          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_VIBVY (L-threonine 3-dehydrogenase OS=Vibrio vulnificus (strain YJ016) GN=tdh PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.958e-14
Identity = 49/159 (30.82%), Postives = 83/159 (52.20%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTV 501
            G     +V PA   FK+P N+S +  ++ +P    +H     ++  E +VLI GAGPIG++    A+  GA  +VI DV++YRL +A+++G    V V+   L D+  E+      M  G DV  + +G     ++ L     GG++ L+G+   +M +
Sbjct:  121 GCFSEYLVIPAFNAFKIPANISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLDLARKMGVTRAVNVAEQKLDDVMVEL-----GMTEGFDVGLEMSGNPSAFNSMLKTMNHGGRIALLGIPPSDMGI 273          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_VIBSL (L-threonine 3-dehydrogenase OS=Vibrio splendidus (strain LGP32) GN=tdh PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.558e-14
Identity = 49/159 (30.82%), Postives = 84/159 (52.83%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV-STNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTV 501
            G+    +V PA   FK+P  +S +  ++ +P    +H     ++  E +VLI GAGPIG++    A+  GA  +VI DV++YRL +A+++G    V V    L+D+  ++      M  G DV  + +G     ++ L+    GGK+ L+G+   +M V
Sbjct:  121 GAFSEFLVIPAFNAFKIPAEISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLDLARQMGVTRAVNVMEEKLEDVMSDL-----GMTEGFDVGLEMSGNPSAFNSMLTNMNHGGKISLLGIPPSDMAV 273          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_PARUW (L-threonine 3-dehydrogenase OS=Protochlamydia amoebophila (strain UWE25) GN=tdh PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.558e-14
Identity = 49/155 (31.61%), Postives = 80/155 (51.61%), Query Frame = 1
Query:   22 VHGSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT--GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            + G      V PA+  F LP ++S + GA+ +P    +H     N+  E +VLI GAGPIG++    A+  GA  IVI DV+DYRL +A+ +G  + + V+       E ++   +++G   G  V  + +G    + T     R GG + L+G+
Sbjct:  118 ISGCFAEYFVLPAENVFSLPPSISDDLGAIFDPYGNAVHTTLAFNLIGE-DVLITGAGPIGIMAAAIAKQAGARHIVITDVNDYRLDLARTMGVSHAINVN------RESLDNFMQSLGIKYGFTVGLEMSGHPDGLKTLTEKIRHGGNIALLGI 265          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: BDH1_YEAST ((R,R)-butanediol dehydrogenase OS=Saccharomyces cerevisiae GN=BDH1 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.558e-14
Identity = 46/141 (32.62%), Postives = 76/141 (53.90%), Query Frame = 1
Query:   22 VHGSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSA 444
            + G    QVV        +P  + L+  A+ EPLSV  HA + +     ++ L++GAGPIGL T+L  +  GA +IV+ ++ + R+ +AK+LG + +   S +     E +  + K+   G D S+DC+G   T  T+L A
Sbjct:  142 ISGGFAEQVVVSQHHIIPVPKEIPLDVAALVEPLSVTWHAVKISGFKKGSSALVLGAGPIGLCTILVLKGMGASKIVVSEIAERRIEMAKKLGVE-VFNPSKHGHKSIEILRGLTKS-HDGFDYSYDCSGIQVTFETSLKA 280          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_THET2 (L-threonine 3-dehydrogenase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=tdh PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.255e-14
Identity = 47/151 (31.13%), Postives = 77/151 (50.99%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            G     VV PA+  +  P ++  E  A+ EP    +H     +     +VLI GAGPIGL+  + ARA GA  I++ D + YRL+ A+   AD +V      +D+ E V ++    G+G++V  + +G    +   L A   GG+  ++G+
Sbjct:  119 GGFAEYVVVPAENAWVNPKDLPFEVAAILEPFGNAVHTVYAGSGVSGKSVLITGAGPIGLMAAMVARASGAGPILVSDPNPYRLAFARPY-ADRLVNPLE--EDLLEVVRRV---TGSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGI 263          

HSP 2 Score: 31.187 bits (69), Expect = 5.255e-14
Identity = 18/54 (33.33%), Postives = 25/54 (46.30%), Query Frame = 2
Query:  551 RYMNTWPLCLEFLXSGKIDVKPLITHRVWFLPERSGRRP*NSARGGTGIKVMFN 712
            R   TW      + SG++D+ PLITHR   LP    R        G  +KV+ +
Sbjct:  290 RLWQTWMQGTALVYSGRVDLSPLITHR---LPLSRYREAFGLLASGQAVKVILD 340          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_PSYIN (L-threonine 3-dehydrogenase OS=Psychromonas ingrahamii (strain 37) GN=tdh PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.698e-14
Identity = 48/159 (30.19%), Postives = 85/159 (53.46%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTV 501
            G+    +V PA   FK+P  +S +  ++ +P    +H+    ++  E +VLI GAGPIG++    A+  GA  +VI D+++YRL +A+++G    V V+   L+D+       Q  M  G DV  + +G     ++ L     GGK+ L+G+   +M++
Sbjct:  121 GAFAEYLVIPAFNAFKIPAGISDDLASIFDPFGNAVHSALSFDVVGE-DVLITGAGPIGIMAAAVAKHAGARYVVITDINEYRLDLARKMGVTRAVNVAQQKLEDVI-----AQLGMTEGFDVGLEMSGAPVAFNSMLKNMSHGGKIALLGIPPSDMSI 273          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: IDND_ECOLI (L-idonate 5-dehydrogenase OS=Escherichia coli (strain K12) GN=idnD PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.698e-14
Identity = 53/158 (33.54%), Postives = 74/158 (46.84%), Query Frame = 1
Query:   10 FSPPVHGSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG 483
            + P V G      +     C   P     +  A  EPL+V +HA  +A       V I G GPIG + +   +  GA  IV  DV    LS+ KE+GAD +V    N Q+   +  K +K      DVSF+ +G   +++T L  TRA G +  VGMG
Sbjct:  118 YFPHVDGGFTRYKMVETSQCVPYPAKADEKVMAFAEPLAVAIHAAHQAGELQGKRVFISGVGPIGCLIVSAVKTLGAAEIVCADVSPRSLSLGKEMGADVLV----NPQNDDMDHWKAEKGY---FDVSFEVSGHPSSVNTCLEVTRARGVMVQVGMG 268          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_ALISL (L-threonine 3-dehydrogenase OS=Aliivibrio salmonicida (strain LFI1238) GN=tdh PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.442e-14
Identity = 48/159 (30.19%), Postives = 85/159 (53.46%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV-STNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTV 501
            G+    +V PA   FK+P  +S +  ++ +P    +H     ++  E +VLI GAGPIG++    A+  GA  +VI DV+++RL +A+++G    V V +  L+D+  ++      M  G DV  + +G     ++ L+    GGK+ L+G+   +M V
Sbjct:  121 GAFSEFLVIPAFNAFKIPAGISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVAKHVGARHVVITDVNEFRLDLARKMGVTRAVNVMNEKLEDVMSDL-----GMTEGFDVGLEMSGNPSAFNSMLTNMNHGGKISLLGIPPSDMAV 273          
The following BLAST results are available for this feature:
BLAST of EY659470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 209
Match NameE-valueIdentityDescription
TDH_PYRAB1.843e-1430.57Probable L-threonine 3-dehydrogenase OS=Pyrococcus... [more]
TDH_XANC51.958e-1430.52L-threonine 3-dehydrogenase OS=Xanthomonas campest... [more]
TDH_VIBVY1.958e-1430.82L-threonine 3-dehydrogenase OS=Vibrio vulnificus (... [more]
TDH_VIBSL2.558e-1430.82L-threonine 3-dehydrogenase OS=Vibrio splendidus (... [more]
TDH_PARUW2.558e-1431.61L-threonine 3-dehydrogenase OS=Protochlamydia amoe... [more]
BDH1_YEAST2.558e-1432.62(R,R)-butanediol dehydrogenase OS=Saccharomyces ce... [more]
TDH_THET25.255e-1431.13L-threonine 3-dehydrogenase OS=Thermus thermophilu... [more]
TDH_PSYIN5.698e-1430.19L-threonine 3-dehydrogenase OS=Psychromonas ingrah... [more]
IDND_ECOLI5.698e-1433.54L-idonate 5-dehydrogenase OS=Escherichia coli (str... [more]
TDH_ALISL7.442e-1430.19L-threonine 3-dehydrogenase OS=Aliivibrio salmonic... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-E04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659470 ID=EY659470; Name=EY659470; organism=Citrus sinensis; type=EST; length=917bp
AAATTTTTTTTTTCTCCGCCCGTTCATGGTTCCCTGCCTAATCAGGTGGT
GCATCCTGCAGACCTATGTTTTAAGCTGCCGGACAATGTGAGCCTGGAGG
AAGGGGCTATGTGTGAGCCCTTGAGTGTTGGTCTTCATGCCTGCCGCCGT
GCCAATATCGGTCCTGAGACAAATGTGCTTATCATGGGAGCAGGGCCCAT
AGGACTTGTCACAATGCTAGGAGCTCGTGCTTTTGGAGCTCCTAGAATTG
TCATTGTGGATGTGGATGACTATCGTTTATCTGTTGCAAAGGAACTTGGT
GCAGATAATATTGTTAAAGTTTCAACAAATTTGCAGGACATAGCTGAAGA
AGTGGAAAAGATACAGAAAGCCATGGGGACAGGAATAGATGTGAGCTTTG
ATTGTGCAGGCTTTAACAAAACCATGTCAACAGCACTGAGTGCTACTCGT
GCAGGTGGTAAAGTTTGCCTCGTGGGGATGGGTCATCATGAAATGACTGT
CCCACTCACTCCGGCTGCTGCAAGGGATGTGGATGTGGTGGGGGGTGTTT
CGCTACATGAACACCTGGCCACTGTGTCTGGAGTTCCTTANAAGCGGAAA
GATTGATGTAAAGCCCCTTATCACGCATAGGGTTTGGTTTCTNCCAGAAA
GAAGTGGAAGAAGGCCTTGAAACAGTGCTCGTGGTGGTACTGGCATCAAA
GTCATGTTTAATCTGTAAATACAACGTAAGTAAACGTTTGGGCAAAGATG
AAATAAAATGAATTGCCGCCGAGTATATGAATAAAAGGGTAGCTATACTT
ATTTCTATCTATTACAAAATAAATCAGATTTCTCAAAAAAAAAAAAAAGG
CCGGCCGCTTATAAGATACAGCTTATACCCTGGCTGCAACGTTTAACTTT
TTATATGGCACCTAATT
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