EY659470

Overview
NameEY659470
Unique NameEY659470
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length917
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_RHIME (L-threonine 3-dehydrogenase OS=Rhizobium meliloti GN=tdh PE=3 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 8.869e-14
Identity = 45/152 (29.61%), Postives = 76/152 (50.00%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            GS    V  P      +PD+V  E  A+ +P    +H     ++  E +VL+ GAGPIG++  + A+  GA ++VI D++  RL +A++LG D++V  S   L D+   +      M  G DV  + +G        +     GGK+ ++G+
Sbjct:  123 GSFAEFVCLPEYNVVSIPDDVPDEIAAIFDPFGNAVHTALSFDLVGE-DVLVTGAGPIGIMGAMVAKRCGARKVVITDINPVRLDLARKLGIDHVVDASKEKLADVMRVI-----GMTEGFDVGLEMSGAAPAFRDMIDKMNNGGKIAILGI 268          

HSP 2 Score: 27.335 bits (59), Expect = 8.869e-14
Identity = 22/72 (30.56%), Postives = 32/72 (44.44%), Query Frame = 2
Query:  473 WGWVIMK*LSHSLRLLQGMWMWWGVFRYMNTWPLCLEFLXSGKIDVKPLITHRVWFLPERSGRRP*NSARGG 688
            W  VI K L+  L+ + G  M+        TW   + F+  G +D+ P+ITHR+     R G     S   G
Sbjct:  277 WNKVIFKMLN--LKGIYGREMF-------ETWYKMIAFVQGG-LDLSPIITHRIGIDDFRDGFEAMRSGNSG 338          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_COXBU (L-threonine 3-dehydrogenase OS=Coxiella burnetii GN=tdh PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.658e-13
Identity = 46/151 (30.46%), Postives = 82/151 (54.30%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            G+    +V PA   +K+P  +S +  A+ +P     H+    ++  E +VLI GAGP+GL++   AR  GA  +VI DV+DYRL++A+++G      V++    + E ++ +   M  G DV  + +G  +   + L+    GGK+  +G+
Sbjct:  119 GAFAEYLVIPAKNAYKIPAKISDDIAAILDPFGNAAHSALEFDLVGE-DVLITGAGPVGLMSAAIARHVGARHVVITDVNDYRLALAEKVGV--TAAVNSTKTPLTETMKNL--GMTEGFDVGLEMSGNAEAFRSMLTVMNNGGKIAFLGI 264          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_COXBR (L-threonine 3-dehydrogenase OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=tdh PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.658e-13
Identity = 46/151 (30.46%), Postives = 82/151 (54.30%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            G+    +V PA   +K+P  +S +  A+ +P     H+    ++  E +VLI GAGP+GL++   AR  GA  +VI DV+DYRL++A+++G      V++    + E ++ +   M  G DV  + +G  +   + L+    GGK+  +G+
Sbjct:  119 GAFAEYLVIPAKNAYKIPAKISDDIAAILDPFGNAAHSALEFDLVGE-DVLITGAGPVGLMSAAIARHVGARHVVITDVNDYRLALAEKVGV--TAAVNSTKTPLTETMKNL--GMTEGFDVGLEMSGNAEAFRSMLTVMNNGGKIAFLGI 264          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_COXBN (L-threonine 3-dehydrogenase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=tdh PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.658e-13
Identity = 46/151 (30.46%), Postives = 82/151 (54.30%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            G+    +V PA   +K+P  +S +  A+ +P     H+    ++  E +VLI GAGP+GL++   AR  GA  +VI DV+DYRL++A+++G      V++    + E ++ +   M  G DV  + +G  +   + L+    GGK+  +G+
Sbjct:  119 GAFAEYLVIPAKNAYKIPAKISDDIAAILDPFGNAAHSALEFDLVGE-DVLITGAGPVGLMSAAIARHVGARHVVITDVNDYRLALAEKVGV--TAAVNSTKTPLTETMKNL--GMTEGFDVGLEMSGNAEAFRSMLTVMNNGGKIAFLGI 264          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_COXB2 (L-threonine 3-dehydrogenase OS=Coxiella burnetii (strain CbuG_Q212) GN=tdh PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.658e-13
Identity = 46/151 (30.46%), Postives = 82/151 (54.30%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            G+    +V PA   +K+P  +S +  A+ +P     H+    ++  E +VLI GAGP+GL++   AR  GA  +VI DV+DYRL++A+++G      V++    + E ++ +   M  G DV  + +G  +   + L+    GGK+  +G+
Sbjct:  119 GAFAEYLVIPAKNAYKIPAKISDDIAAILDPFGNAAHSALEFDLVGE-DVLITGAGPVGLMSAAIARHVGARHVVITDVNDYRLALAEKVGV--TAAVNSTKTPLTETMKNL--GMTEGFDVGLEMSGNAEAFRSMLTVMNNGGKIAFLGI 264          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_PYRKO (Probable L-threonine 3-dehydrogenase OS=Pyrococcus kodakaraensis GN=tdh PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.524e-13
Identity = 48/164 (29.27%), Postives = 83/164 (50.61%), Query Frame = 1
Query:   10 FSPPVHGSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTV 501
            F   + G   +  + PA   +K P ++  E  A+ EPL   +       I   +  LI GAGP+GL+ +  A+A GA  +++ +  ++R  +AK++GAD +V      +D  + V  I    G G++V  + +G  K +   L A   GG+V L+G+   E+T+
Sbjct:  117 FGVDMDGVFAHYAIVPAKNAWKNPKDMPPEYAALQEPLGNAVDTVLAGPIAGRST-LITGAGPLGLLGIAVAKASGAYPVIVSEPSEFRRKLAKKVGADYVVNPFE--EDPVKFVMDITD--GAGVEVFLEFSGAPKALEQGLKAVTPGGRVSLLGLFPREVTI 275          

HSP 2 Score: 26.1794 bits (56), Expect = 2.524e-13
Identity = 9/23 (39.13%), Postives = 15/23 (65.22%), Query Frame = 2
Query:  563 TWPLCLEFLXSGKIDVKPLITHR 631
            TW      + SGK+++ P+ITH+
Sbjct:  299 TWYTVSSLIQSGKLNLDPIITHK 321          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_THET8 (L-threonine 3-dehydrogenase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=tdh PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 2.525e-13
Identity = 46/151 (30.46%), Postives = 76/151 (50.33%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            G     VV PA+  +  P ++  E  A+ EP    +H     +     +VLI GAGPIGL+  +  RA GA  I++ D + YRL+ A+   AD +V      +D+ E V ++    G+G++V  + +G    +   L A   GG+  ++G+
Sbjct:  119 GGFAEYVVVPAENAWVNPKDLPFEVAAILEPFGNAVHTVYAGSGVSGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLE--EDLLEVVRRV---TGSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGI 263          

HSP 2 Score: 30.4166 bits (67), Expect = 2.525e-13
Identity = 17/54 (31.48%), Postives = 25/54 (46.30%), Query Frame = 2
Query:  551 RYMNTWPLCLEFLXSGKIDVKPLITHRVWFLPERSGRRP*NSARGGTGIKVMFN 712
            R   TW      + SG++D+ PL+THR   LP    R        G  +KV+ +
Sbjct:  290 RLWQTWMQGTALVYSGRVDLSPLLTHR---LPLSRYREAFGLLASGQAVKVILD 340          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_BACSU (L-threonine 3-dehydrogenase OS=Bacillus subtilis GN=tdh PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.259e-13
Identity = 46/163 (28.22%), Postives = 82/163 (50.31%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM--GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT 510
            G     V  PAD  ++ P ++     ++ EPL   +H    +     T  +I G GPIGL+ +  A+A GA +++ +D ++YRL +AK++GA   V +        E+  KI  A+  G G D+  + +G    ++  L+    GG+  ++ +  H +T+ LT
Sbjct:  124 GCFAEYVKVPADNIWRNPADMDPSIASIQEPLGNAVHTVLESQPAGGTTAVI-GCGPIGLMAVAVAKAAGASQVIAIDKNEYRLRLAKQMGATCTVSIE------KEDPLKIVSALTSGEGADLVCEMSGHPSAIAQGLAMAANGGRFHILSLPEHPVTIDLT 279          

HSP 2 Score: 25.0238 bits (53), Expect = 4.259e-13
Identity = 9/27 (33.33%), Postives = 16/27 (59.26%), Query Frame = 2
Query:  551 RYMNTWPLCLEFLXSGKIDVKPLITHR 631
            +  +TW    + + S  ID+ P+ITH+
Sbjct:  296 KMFSTWRQVSQLISSNMIDLAPVITHQ 322          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_BACLD (L-threonine 3-dehydrogenase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=tdh PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 7.185e-13
Identity = 42/161 (26.09%), Postives = 80/161 (49.69%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT 510
            G     V  PA   +K P  +  +  ++ EPL   +H      +     V ++G GPIGL+ +  A+A GA +++ +D ++YRL +A ++GA +I+ V    +D  + V  +    G G D+  + +G    +  +L     GG+V ++ +  H + + +T
Sbjct:  123 GCFAEYVKMPAANIWKNPAGMPEDLASIQEPLGNAVHTVL-TGMTAGVKVAVVGCGPIGLMAVAVAKASGAAQVIAIDKNEYRLDLALQMGATDIISVEK--EDPLKNVSALTN--GEGADLVCEMSGHPTAIRQSLKMAANGGRVHVLSLPEHPVCIDMT 278          

HSP 2 Score: 28.4906 bits (62), Expect = 7.185e-13
Identity = 12/27 (44.44%), Postives = 15/27 (55.56%), Query Frame = 2
Query:  551 RYMNTWPLCLEFLXSGKIDVKPLITHR 631
            +   TW      L SG I +KP+ITHR
Sbjct:  295 KMFETWRQVSGLLQSGTIQIKPVITHR 321          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_RHILO (L-threonine 3-dehydrogenase OS=Rhizobium loti GN=tdh PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 9.334e-13
Identity = 45/152 (29.61%), Postives = 78/152 (51.32%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            G+    +  P      +PD+V  E  A+ +PL   +H     ++  E +VL+ GAGPIG++  L A+  GA ++VI D++  RL++AK+LG  ++V  S   L+D+   +      M  G DV  + +G        +     GGK+ ++G+
Sbjct:  123 GAFGEYLAIPQHNVVPIPDDVPDEIAAIFDPLGNAVHTALSFDLVGE-DVLVTGAGPIGIMGALVAQCVGARKVVITDINPVRLALAKKLGVQHVVDASKEKLRDVMPVL-----GMTEGFDVGLEMSGAAPAFRDMIDTMNNGGKIAILGI 268          

HSP 2 Score: 22.7126 bits (47), Expect = 9.334e-13
Identity = 9/16 (56.25%), Postives = 11/16 (68.75%), Query Frame = 2
Query:  587 LXSGKIDVKPLITHRV 634
            L  G +DV  LITHR+
Sbjct:  305 LVQGPLDVSGLITHRI 320          
The following BLAST results are available for this feature:
BLAST of EY659470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 209
Match NameE-valueIdentityDescription
TDH_RHIME8.869e-1429.61L-threonine 3-dehydrogenase OS=Rhizobium meliloti ... [more]
TDH_COXBU1.658e-1330.46L-threonine 3-dehydrogenase OS=Coxiella burnetii G... [more]
TDH_COXBR1.658e-1330.46L-threonine 3-dehydrogenase OS=Coxiella burnetii (... [more]
TDH_COXBN1.658e-1330.46L-threonine 3-dehydrogenase OS=Coxiella burnetii (... [more]
TDH_COXB21.658e-1330.46L-threonine 3-dehydrogenase OS=Coxiella burnetii (... [more]
TDH_PYRKO2.524e-1329.27Probable L-threonine 3-dehydrogenase OS=Pyrococcus... [more]
TDH_THET82.525e-1330.46L-threonine 3-dehydrogenase OS=Thermus thermophilu... [more]
TDH_BACSU4.259e-1328.22L-threonine 3-dehydrogenase OS=Bacillus subtilis G... [more]
TDH_BACLD7.185e-1326.09L-threonine 3-dehydrogenase OS=Bacillus lichenifor... [more]
TDH_RHILO9.334e-1329.61L-threonine 3-dehydrogenase OS=Rhizobium loti GN=t... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-E04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659470 ID=EY659470; Name=EY659470; organism=Citrus sinensis; type=EST; length=917bp
AAATTTTTTTTTTCTCCGCCCGTTCATGGTTCCCTGCCTAATCAGGTGGT
GCATCCTGCAGACCTATGTTTTAAGCTGCCGGACAATGTGAGCCTGGAGG
AAGGGGCTATGTGTGAGCCCTTGAGTGTTGGTCTTCATGCCTGCCGCCGT
GCCAATATCGGTCCTGAGACAAATGTGCTTATCATGGGAGCAGGGCCCAT
AGGACTTGTCACAATGCTAGGAGCTCGTGCTTTTGGAGCTCCTAGAATTG
TCATTGTGGATGTGGATGACTATCGTTTATCTGTTGCAAAGGAACTTGGT
GCAGATAATATTGTTAAAGTTTCAACAAATTTGCAGGACATAGCTGAAGA
AGTGGAAAAGATACAGAAAGCCATGGGGACAGGAATAGATGTGAGCTTTG
ATTGTGCAGGCTTTAACAAAACCATGTCAACAGCACTGAGTGCTACTCGT
GCAGGTGGTAAAGTTTGCCTCGTGGGGATGGGTCATCATGAAATGACTGT
CCCACTCACTCCGGCTGCTGCAAGGGATGTGGATGTGGTGGGGGGTGTTT
CGCTACATGAACACCTGGCCACTGTGTCTGGAGTTCCTTANAAGCGGAAA
GATTGATGTAAAGCCCCTTATCACGCATAGGGTTTGGTTTCTNCCAGAAA
GAAGTGGAAGAAGGCCTTGAAACAGTGCTCGTGGTGGTACTGGCATCAAA
GTCATGTTTAATCTGTAAATACAACGTAAGTAAACGTTTGGGCAAAGATG
AAATAAAATGAATTGCCGCCGAGTATATGAATAAAAGGGTAGCTATACTT
ATTTCTATCTATTACAAAATAAATCAGATTTCTCAAAAAAAAAAAAAAGG
CCGGCCGCTTATAAGATACAGCTTATACCCTGGCTGCAACGTTTAACTTT
TTATATGGCACCTAATT
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