EY659470

Overview
NameEY659470
Unique NameEY659470
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length917
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_THEON (Probable L-threonine 3-dehydrogenase OS=Thermococcus onnurineus (strain NA1) GN=tdh PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 2.653e-12
Identity = 47/163 (28.83%), Postives = 79/163 (48.47%), Query Frame = 1
Query:   10 FSPPVHGSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMT 498
            F   + G      + PA   +K P ++  E   + EPL   +       I   +  LI GAGP+GL+ +  A+A GA  +++ +  ++R  +AK++GAD +V      +D  + V  I    G G++V  + +G  K     L A   GG+V L+G+   E+T
Sbjct:  117 FGVDMDGVFAEYAIVPAQNAWKNPKDMPPEYATLQEPLGNAVDTVLAGPIAGRST-LITGAGPLGLLGIAVAKASGAYPVIVSEPSEFRRELAKKVGADYVVNPFE--EDPVKFVMDITD--GAGVEVFLEFSGAPKAFEQGLQAVTPGGRVSLLGLFPREVT 274          

HSP 2 Score: 26.1794 bits (56), Expect = 2.653e-12
Identity = 9/23 (39.13%), Postives = 15/23 (65.22%), Query Frame = 2
Query:  563 TWPLCLEFLXSGKIDVKPLITHR 631
            TW      + SGK+++ P+ITH+
Sbjct:  299 TWYTVSSLIQSGKLNLDPIITHK 321          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_MESSB (L-threonine 3-dehydrogenase OS=Mesorhizobium sp. (strain BNC1) GN=tdh PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.655e-12
Identity = 44/152 (28.95%), Postives = 77/152 (50.66%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV-STNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            G+    +  P      +PD+V  E  A+ +PL   +H     ++  E +VL+ GAGPIG++  L A+  GA ++VI D++  RL++AK+LG  ++V      L D+  ++      M  G DV  + +G        +     GGK+ ++G+
Sbjct:  123 GAFAEYISLPQHNVVAIPDDVPDEIAAIFDPLGNAVHTALSFDLVGE-DVLVTGAGPIGIMGALVAQCVGARKVVITDINPGRLALAKKLGVRHVVNAREEKLTDVMRKL-----GMTEGFDVGLEMSGSASAFRDMIDVMNNGGKIAILGI 268          

HSP 2 Score: 22.3274 bits (46), Expect = 2.655e-12
Identity = 8/16 (50.00%), Postives = 11/16 (68.75%), Query Frame = 2
Query:  587 LXSGKIDVKPLITHRV 634
            L  G +D+  LITHR+
Sbjct:  305 LVQGPLDISGLITHRI 320          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: DOIAD_STRKN (2-deoxy-scyllo-inosamine dehydrogenase OS=Streptomyces kanamyceticus GN=kanE PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.083e-12
Identity = 49/162 (30.25%), Postives = 76/162 (46.91%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTP 513
            G+    +  P D    LPD +SL      EPL+V L+A   A + P   V +MGAG IGL+ M  AR  G    V+ +    R +VA +LGA  +        +  +  E + +      DV  + +G+   +  A+   R GG++ L+G    E T P++P
Sbjct:  117 GACAEYMTIPVDNLRPLPDALSLRSACQVEPLAVALNAVSIAGVAPGDRVAVMGAGGIGLMLMQVARHLGGEVTVVSEPVAERRAVAGQLGATELCSA-----EPGQLAELVARRPELTPDVVLEASGYPAALQEAIEVVRPGGRIGLIGY-RVEETGPMSP 272          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: GATD_ECOLI (Galactitol-1-phosphate 5-dehydrogenase OS=Escherichia coli (strain K12) GN=gatD PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.333e-12
Identity = 44/156 (28.21%), Postives = 80/156 (51.28%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEM 495
            G     +V      F LP ++ +E+GA  EP++VGLHA   A      NV+I+GAG IGL+ +  A A GA  +  +D+   +L++AK  GA   ++   + +  A +++ + + +     +  + AG  +T+  A+       ++ LVG  H ++
Sbjct:  115 GGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGLHAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGA---MQTFNSSEMSAPQMQSVLRELRFN-QLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDL 266          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: GATD_ECO57 (Galactitol-1-phosphate 5-dehydrogenase OS=Escherichia coli O157:H7 GN=gatD PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.333e-12
Identity = 44/156 (28.21%), Postives = 80/156 (51.28%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEM 495
            G     +V      F LP ++ +E+GA  EP++VGLHA   A      NV+I+GAG IGL+ +  A A GA  +  +D+   +L++AK  GA   ++   + +  A +++ + + +     +  + AG  +T+  A+       ++ LVG  H ++
Sbjct:  115 GGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGLHAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGA---MQTFNSSEMSAPQMQSVLRELRFN-QLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDL 266          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_SINMW (L-threonine 3-dehydrogenase OS=Sinorhizobium medicae (strain WSM419) GN=tdh PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.965e-12
Identity = 46/152 (30.26%), Postives = 76/152 (50.00%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            GS    V  P      +PD+V  E  A+ +P    +H     ++  E +VL+ GAGPIG++  L A+  GA ++VI D++  RL +A+++G D +V  S  NL D+   +      M  G DV  + +G        +     GGK+ ++G+
Sbjct:  123 GSFAEFVCLPEYNVVSIPDDVPDEIAAIFDPFGNAVHTALSFDLVGE-DVLVTGAGPIGIMGALVAKRCGARKVVITDINPVRLDLARKVGIDYVVDASKENLADVMRVI-----GMTEGFDVGLEMSGAAPAFRDMIDKMNNGGKIAILGI 268          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: YJMD_BACSU (Uncharacterized zinc-type alcohol dehydrogenase-like protein yjmD OS=Bacillus subtilis GN=yjmD PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.647e-11
Identity = 46/162 (28.40%), Postives = 77/162 (47.53%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTP 513
            G +   +V P      +  ++  EE  M EP ++G  A  R  +     VLI GAGPIG+  +  A+  GA  +++ D+++ RL+ AKE GAD +V V    + +AE V  ++     G +V  D     +T + ++ A    G V ++G       +   P
Sbjct:  116 GGMREYIVLPERQLHAVSKDLPWEEAVMAEPYTIGAQAVWRGQVEKGDTVLIQGAGPIGICVLKMAKLAGA-AVMMTDLNNERLAFAKENGADAVVNVQA--EHVAERV--LEWTGNEGANVVIDAVCLPETFALSIEAVSPAGHVVVLGFDERAAQISQLP 272          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: ADH3_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.515e-11
Identity = 50/151 (33.11%), Postives = 72/151 (47.68%), Query Frame = 1
Query:   58 ADLCFKLPDNVSLEEGAMCEPLSVGLH-ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPL 507
            AD   K+PDN+S EE A      V  + A +     P   V I G G +G V +  A+A G   +V VD+ D +L +AKELGAD +V        + E+  K  K    G+  +   A       +A ++ R GG   LVG+   EM +P+
Sbjct:  128 ADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVV------NPLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPI 271          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_SACEN (L-threonine 3-dehydrogenase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=tdh PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.903e-11
Identity = 44/152 (28.95%), Postives = 75/152 (49.34%), Query Frame = 1
Query:   25 HGSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            +G+     V P    +   ++V  +  A+ +P    +H      +  E +VLI GAGPIGL+    AR  GA  +VI DV ++RL +A+ +G D  V V+     IA+   K+   M  G DV+ + +G    +   +     GG++ ++G+
Sbjct:  118 NGAFAEYAVLPEQNVWVHREHVDPDVAAIFDPFGNAVHTALTFPVVGE-DVLITGAGPIGLMAACVARHAGARNVVITDVSEHRLELARRVGVDLAVNVAET--GIADAQAKL--GMSEGFDVAMEVSGQPSALRETIENMAHGGRIAMLGL 264          

HSP 2 Score: 22.3274 bits (46), Expect = 7.903e-11
Identity = 11/23 (47.83%), Postives = 14/23 (60.87%), Query Frame = 2
Query:  563 TWPLCLEFLXSGKIDVKPLITHR 631
            TW      L SG +D+ P+ITHR
Sbjct:  294 TWYSMSVLLQSG-LDLSPVITHR 315          
The following BLAST results are available for this feature:
BLAST of EY659470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 209
Match NameE-valueIdentityDescription
TDH_THEON2.653e-1228.83Probable L-threonine 3-dehydrogenase OS=Thermococc... [more]
TDH_MESSB2.655e-1228.95L-threonine 3-dehydrogenase OS=Mesorhizobium sp. (... [more]
DOIAD_STRKN4.083e-1230.252-deoxy-scyllo-inosamine dehydrogenase OS=Streptom... [more]
GATD_ECOLI5.333e-1228.21Galactitol-1-phosphate 5-dehydrogenase OS=Escheric... [more]
GATD_ECO575.333e-1228.21Galactitol-1-phosphate 5-dehydrogenase OS=Escheric... [more]
TDH_SINMW6.965e-1230.26L-threonine 3-dehydrogenase OS=Sinorhizobium medic... [more]
YJMD_BACSU2.647e-1128.40Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
ADH3_BACST4.515e-1133.11Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
TDH_SACEN7.903e-1128.95L-threonine 3-dehydrogenase OS=Saccharopolyspora e... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-E04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659470 ID=EY659470; Name=EY659470; organism=Citrus sinensis; type=EST; length=917bp
AAATTTTTTTTTTCTCCGCCCGTTCATGGTTCCCTGCCTAATCAGGTGGT
GCATCCTGCAGACCTATGTTTTAAGCTGCCGGACAATGTGAGCCTGGAGG
AAGGGGCTATGTGTGAGCCCTTGAGTGTTGGTCTTCATGCCTGCCGCCGT
GCCAATATCGGTCCTGAGACAAATGTGCTTATCATGGGAGCAGGGCCCAT
AGGACTTGTCACAATGCTAGGAGCTCGTGCTTTTGGAGCTCCTAGAATTG
TCATTGTGGATGTGGATGACTATCGTTTATCTGTTGCAAAGGAACTTGGT
GCAGATAATATTGTTAAAGTTTCAACAAATTTGCAGGACATAGCTGAAGA
AGTGGAAAAGATACAGAAAGCCATGGGGACAGGAATAGATGTGAGCTTTG
ATTGTGCAGGCTTTAACAAAACCATGTCAACAGCACTGAGTGCTACTCGT
GCAGGTGGTAAAGTTTGCCTCGTGGGGATGGGTCATCATGAAATGACTGT
CCCACTCACTCCGGCTGCTGCAAGGGATGTGGATGTGGTGGGGGGTGTTT
CGCTACATGAACACCTGGCCACTGTGTCTGGAGTTCCTTANAAGCGGAAA
GATTGATGTAAAGCCCCTTATCACGCATAGGGTTTGGTTTCTNCCAGAAA
GAAGTGGAAGAAGGCCTTGAAACAGTGCTCGTGGTGGTACTGGCATCAAA
GTCATGTTTAATCTGTAAATACAACGTAAGTAAACGTTTGGGCAAAGATG
AAATAAAATGAATTGCCGCCGAGTATATGAATAAAAGGGTAGCTATACTT
ATTTCTATCTATTACAAAATAAATCAGATTTCTCAAAAAAAAAAAAAAGG
CCGGCCGCTTATAAGATACAGCTTATACCCTGGCTGCAACGTTTAACTTT
TTATATGGCACCTAATT
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