EY659470

Overview
NameEY659470
Unique NameEY659470
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length917
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_ECO27 (L-threonine 3-dehydrogenase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=tdh PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.419e-17
Identity = 51/162 (31.48%), Postives = 86/162 (53.09%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT 510
            G     +V PA   FK+PDN+S +  ++ +P    +H     ++  E +VL+ GAGPIG++    A+  GA  +VI DV++YRL +A+++G    V V+  NL D+  E+      M  G DV  + +G      T L     GG++ ++G+   +M++  T
Sbjct:  119 GCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMGITRAVNVAKENLNDVMTEL-----GMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLGIPPSDMSIDWT 274          

HSP 2 Score: 22.7126 bits (47), Expect = 3.419e-17
Identity = 10/23 (43.48%), Postives = 14/23 (60.87%), Query Frame = 2
Query:  563 TWPLCLEFLXSGKIDVKPLITHR 631
            TW      + SG +D+ P+ITHR
Sbjct:  294 TWYKMAALIQSG-LDLSPIITHR 315          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_SHESW (L-threonine 3-dehydrogenase OS=Shewanella sp. (strain W3-18-1) GN=tdh PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.216e-17
Identity = 53/159 (33.33%), Postives = 86/159 (54.09%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTV 501
            GS    +V PA   FK+PD++S +  ++ +P    +H     ++  E +VLI GAGPIG++     R  GA  +VI DV++YRL +A+++GA   V VS  +L+D+ +E+      M  G DV  + +G        L     GGK+ ++G+   EM +
Sbjct:  119 GSFAEYLVIPAFNAFKIPDDISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVCRHVGARHVVITDVNEYRLELARKMGATRAVNVSKESLKDVMKEL-----GMTEGFDVGLEMSGVPSAFHAMLDTMNHGGKIAMLGIPGGEMAI 271          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_ERWCT (L-threonine 3-dehydrogenase OS=Erwinia carotovora subsp. atroseptica GN=tdh PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.506e-17
Identity = 53/159 (33.33%), Postives = 83/159 (52.20%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTV 501
            GS    +V PA   F++PDN+S E  A+ +P    +H     ++  E +VLI GAGPIG++     R  GA  +VI DV+ YRL +A ++GA   V V+   L D+      I+  M  G D+  + +G        L A   GG++ ++G+ H  M++
Sbjct:  119 GSFAEYLVIPAYNAFRIPDNISDELAAIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGMMAAAVCRHVGARNVVITDVNAYRLELASKMGATRAVNVAEEKLTDV-----MIELGMTEGFDIGLEMSGAPSAFRAMLKAMNHGGRIAMLGIPHEPMSI 271          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_ECO24 (L-threonine 3-dehydrogenase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=tdh PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.777e-17
Identity = 51/162 (31.48%), Postives = 85/162 (52.47%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT 510
            G     +V PA   FK+PDN+S +  ++ +P    +H     ++  E +VL+ GAGPIG++    A+  GA  +VI DV++YRL +A+++G    V V+  NL D+  E+      M  G DV  +  G      T L     GG++ ++G+   +M++  T
Sbjct:  119 GCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMGITRAVNVAKENLNDVMAEL-----GMTEGFDVGLEMPGAPPAFRTMLDTMNHGGRIAMLGIPPSDMSIDWT 274          

HSP 2 Score: 22.7126 bits (47), Expect = 5.777e-17
Identity = 10/23 (43.48%), Postives = 14/23 (60.87%), Query Frame = 2
Query:  563 TWPLCLEFLXSGKIDVKPLITHR 631
            TW      + SG +D+ P+ITHR
Sbjct:  294 TWYKMAALIQSG-LDLSPIITHR 315          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_YERE8 (L-threonine 3-dehydrogenase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=tdh PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.191e-17
Identity = 51/159 (32.08%), Postives = 86/159 (54.09%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTV 501
            GS    +V PA   FK+PDN+S E  A+ +P    +H     ++  E +VL+ GAGPIG++     +  GA  +VI DV++YRL +A+++G    V V+  NL D+  E+      M  G DV  + +G        L++   GG++ ++G+   +M++
Sbjct:  119 GSFAEYLVIPAFNAFKIPDNISDELAAIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVCKHVGARHVVITDVNEYRLDLARKMGVTRAVNVNKENLNDVMAEL-----GMTEGFDVGLEMSGAPPAFRALLNSMNHGGRIAMLGIPPSDMSI 271          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_SHEPA (L-threonine 3-dehydrogenase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=tdh PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.191e-17
Identity = 51/159 (32.08%), Postives = 87/159 (54.72%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTV 501
            G+    +V PA   FK+PD++S +  ++ +P    +H     ++  E +VLI GAGPIG++     R  GA  +VI DV++YRL +A+++GA   V V+  NL+D+ +E+      M  G DV  + +G      + L     GGK+ ++G+   +M +
Sbjct:  119 GAFAEYLVIPAFNAFKIPDDISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVCRHVGARHVVITDVNEYRLELAEKMGATRAVNVAKENLEDVMQEL-----GMTEGFDVGLEMSGVPSAFHSMLDTMNHGGKIAMLGIPGGDMAI 271          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_BURPP (L-threonine 3-dehydrogenase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=tdh PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.191e-17
Identity = 53/152 (34.87%), Postives = 84/152 (55.26%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            G+    +V PA   FK+P  +S +  A+ +P     H     N+  E +VLI GAGPIG++ +  A+  GA  +VI DV+DYRL +A+++GA   V VS  +L+D+  ++      M  G DV  + +G     ++ L A   GGK+ L+G+
Sbjct:  119 GAFAEYLVIPAFNAFKIPPEISDDLAAIFDPFGNATHTALSFNLVGE-DVLITGAGPIGIMAVAIAKHVGARNVVITDVNDYRLELARKMGATRAVNVSRESLRDVMADLH-----MTEGFDVGLEMSGVPSAFTSMLEAMNHGGKIALLGI 264          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_BURP8 (L-threonine 3-dehydrogenase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=tdh PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.191e-17
Identity = 53/152 (34.87%), Postives = 83/152 (54.61%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 480
            G+    +V PA   FK+P  +S +  A+ +P     H     N+  E +VLI GAGPIG++ +  A+  GA  +VI DV+DYRL +A+++GA   V VS   L+D+  ++      M  G DV  + +G     ++ L A   GGK+ L+G+
Sbjct:  119 GAFAEYLVIPAFNAFKIPPEISDDLAAIFDPFGNATHTALSFNLVGE-DVLITGAGPIGIMAVAIAKHVGARNVVITDVNDYRLELARKMGATRAVNVSRETLRDVMRDLH-----MTEGFDVGLEMSGVPSAFTSMLEAMNHGGKIALLGI 264          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_SHESM (L-threonine 3-dehydrogenase OS=Shewanella sp. (strain MR-4) GN=tdh PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.392e-17
Identity = 52/159 (32.70%), Postives = 86/159 (54.09%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTV 501
            GS    +V PA   FK+PD++S +  ++ +P    +H     ++  E +VLI GAGPIG++     R  GA  +VI DV++YRL +A+++GA   V V+  +L+D+ +E+      M  G DV  + +G        L     GGK+ ++G+   EM +
Sbjct:  119 GSFAEYLVIPAFNAFKIPDDISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVCRHVGARHVVITDVNEYRLELARKMGATRAVNVAQESLKDVMKEL-----GMTEGFDVGLEMSGVPSAFHAMLDTMNHGGKIAMLGIPGGEMAI 271          
BLAST of EY659470 vs. ExPASy Swiss-Prot
Match: TDH_SHESA (L-threonine 3-dehydrogenase OS=Shewanella sp. (strain ANA-3) GN=tdh PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.392e-17
Identity = 52/159 (32.70%), Postives = 86/159 (54.09%), Query Frame = 1
Query:   28 GSLPNQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTV 501
            GS    +V PA   FK+PD++S +  ++ +P    +H     ++  E +VLI GAGPIG++     R  GA  +VI DV++YRL +A+++GA   V V+  +L+D+ +E+      M  G DV  + +G        L     GGK+ ++G+   EM +
Sbjct:  119 GSFAEYLVIPAFNAFKIPDDISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVCRHVGARHVVITDVNEYRLELARKMGATRAVNVAQESLKDVMKEL-----GMTEGFDVGLEMSGVPSAFHAMLDTMNHGGKIAMLGIPGGEMAI 271          
The following BLAST results are available for this feature:
BLAST of EY659470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 209
Match NameE-valueIdentityDescription
TDH_ECO273.419e-1731.48L-threonine 3-dehydrogenase OS=Escherichia coli O1... [more]
TDH_SHESW4.216e-1733.33L-threonine 3-dehydrogenase OS=Shewanella sp. (str... [more]
TDH_ERWCT5.506e-1733.33L-threonine 3-dehydrogenase OS=Erwinia carotovora ... [more]
TDH_ECO245.777e-1731.48L-threonine 3-dehydrogenase OS=Escherichia coli O1... [more]
TDH_YERE87.191e-1732.08L-threonine 3-dehydrogenase OS=Yersinia enterocoli... [more]
TDH_SHEPA7.191e-1732.08L-threonine 3-dehydrogenase OS=Shewanella pealeana... [more]
TDH_BURPP7.191e-1734.87L-threonine 3-dehydrogenase OS=Burkholderia phytof... [more]
TDH_BURP87.191e-1734.87L-threonine 3-dehydrogenase OS=Burkholderia phymat... [more]
TDH_SHESM9.392e-1732.70L-threonine 3-dehydrogenase OS=Shewanella sp. (str... [more]
TDH_SHESA9.392e-1732.70L-threonine 3-dehydrogenase OS=Shewanella sp. (str... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-E04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659470 ID=EY659470; Name=EY659470; organism=Citrus sinensis; type=EST; length=917bp
AAATTTTTTTTTTCTCCGCCCGTTCATGGTTCCCTGCCTAATCAGGTGGT
GCATCCTGCAGACCTATGTTTTAAGCTGCCGGACAATGTGAGCCTGGAGG
AAGGGGCTATGTGTGAGCCCTTGAGTGTTGGTCTTCATGCCTGCCGCCGT
GCCAATATCGGTCCTGAGACAAATGTGCTTATCATGGGAGCAGGGCCCAT
AGGACTTGTCACAATGCTAGGAGCTCGTGCTTTTGGAGCTCCTAGAATTG
TCATTGTGGATGTGGATGACTATCGTTTATCTGTTGCAAAGGAACTTGGT
GCAGATAATATTGTTAAAGTTTCAACAAATTTGCAGGACATAGCTGAAGA
AGTGGAAAAGATACAGAAAGCCATGGGGACAGGAATAGATGTGAGCTTTG
ATTGTGCAGGCTTTAACAAAACCATGTCAACAGCACTGAGTGCTACTCGT
GCAGGTGGTAAAGTTTGCCTCGTGGGGATGGGTCATCATGAAATGACTGT
CCCACTCACTCCGGCTGCTGCAAGGGATGTGGATGTGGTGGGGGGTGTTT
CGCTACATGAACACCTGGCCACTGTGTCTGGAGTTCCTTANAAGCGGAAA
GATTGATGTAAAGCCCCTTATCACGCATAGGGTTTGGTTTCTNCCAGAAA
GAAGTGGAAGAAGGCCTTGAAACAGTGCTCGTGGTGGTACTGGCATCAAA
GTCATGTTTAATCTGTAAATACAACGTAAGTAAACGTTTGGGCAAAGATG
AAATAAAATGAATTGCCGCCGAGTATATGAATAAAAGGGTAGCTATACTT
ATTTCTATCTATTACAAAATAAATCAGATTTCTCAAAAAAAAAAAAAAGG
CCGGCCGCTTATAAGATACAGCTTATACCCTGGCTGCAACGTTTAACTTT
TTATATGGCACCTAATT
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