EY659448

Overview
NameEY659448
Unique NameEY659448
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length965
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659448 vs. ExPASy Swiss-Prot
Match: DKGB_ECO57 (2,5-diketo-D-gluconic acid reductase B OS=Escherichia coli O157:H7 GN=dkgB PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.360e-12
Identity = 56/206 (27.18%), Postives = 87/206 (42.23%), Query Frame = 1
Query:   31 VRASLXNLGVTYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKFLEGLVDSGLVRAIGVSNFGVSQI-KELLKFAKIMPAVNQVELHPFWRQDELVKFCQSKGIHVSAHTPLGVXXXXXXXXXXXXXXXXXXXXPRISFXRSRSVHGPMLKLSVVSEIADKHKKTPEQGILRWGLQRGTSVLPCXLKPDRIRKNI 645
            ++ SL  L   Y+DL L+HWP            P  +   E  +F+  L +A K        GL R IG+SNF +  + K +        A NQ+EL P+ +  ++V + +  GIH++++  L                                 +G  LK  V++ IA KH  TP Q IL W +  G SV+P   K + +  N+
Sbjct:   79 LKESLQKLRTDYVDLTLIHWPS-----------PNDEVSVE--EFMQALLEAKK-------EGLTREIGISNFTIPLMEKAIAAVGAENIATNQIELSPYLQNRKVVAWAKQHGIHITSYMTL--------------------------------AYGKALKDEVIARIAAKHNATPAQVILAWAMGEGYSVIPSSTKRENLESNL 232          
BLAST of EY659448 vs. ExPASy Swiss-Prot
Match: DKGB_SALTI (2,5-diketo-D-gluconic acid reductase B OS=Salmonella typhi GN=dkgB PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.389e-12
Identity = 56/206 (27.18%), Postives = 88/206 (42.72%), Query Frame = 1
Query:   31 VRASLXNLGVTYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKFLEGLVDSGLVRAIGVSNFGVSQI-KELLKFAKIMPAVNQVELHPFWRQDELVKFCQSKGIHVSAHTPLGVXXXXXXXXXXXXXXXXXXXXPRISFXRSRSVHGPMLKLSVVSEIADKHKKTPEQGILRWGLQRGTSVLPCXLKPDRIRKNI 645
            ++ SL  L   Y+DL L+HWP       GDA            +F+  L +A K        GL R IG+SNF +  + K +        A NQ+EL P+ +  ++V + ++ GIH++++  L                                 +G  LK  V++ IA KH  TP Q IL W +  G SV+P   + + +  N+
Sbjct:   79 LKESLKKLRTDYVDLTLIHWPSP-----GDAVSV--------EEFMQALLEAKK-------QGLTREIGISNFTIPLMEKAIAAVGADHIATNQIELSPYLQNRKVVDWAKAHGIHITSYMTL--------------------------------AYGKALKDEVIARIAVKHNATPVQVILAWAMGEGYSVIPSSTRRENLASNL 232          
BLAST of EY659448 vs. ExPASy Swiss-Prot
Match: DKGB_ECOLI (2,5-diketo-D-gluconic acid reductase B OS=Escherichia coli (strain K12) GN=dkgB PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 7.486e-12
Identity = 56/206 (27.18%), Postives = 86/206 (41.75%), Query Frame = 1
Query:   31 VRASLXNLGVTYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKFLEGLVDSGLVRAIGVSNFGVSQI-KELLKFAKIMPAVNQVELHPFWRQDELVKFCQSKGIHVSAHTPLGVXXXXXXXXXXXXXXXXXXXXPRISFXRSRSVHGPMLKLSVVSEIADKHKKTPEQGILRWGLQRGTSVLPCXLKPDRIRKNI 645
            ++ SL  L   Y+DL L+HWP            P  +   E  +F+  L +A K        GL R IG+SNF +  + K +        A NQ+EL P+ +  ++V + +  GIH++++  L                                 +G  LK  V++ IA KH  TP Q IL W +  G SV+P   K   +  N+
Sbjct:   79 LKESLQKLRTDYVDLTLIHWPS-----------PNDEVSVE--EFMQALLEAKK-------QGLTREIGISNFTIPLMEKAIAAVGAENIATNQIELSPYLQNRKVVAWAKQHGIHITSYMTL--------------------------------AYGKALKDEVIARIAAKHNATPAQVILAWAMGEGYSVIPSSTKRKNLESNL 232          
BLAST of EY659448 vs. ExPASy Swiss-Prot
Match: DKGB_SALTY (2,5-diketo-D-gluconic acid reductase B OS=Salmonella typhimurium GN=dkgB PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.777e-12
Identity = 55/206 (26.70%), Postives = 88/206 (42.72%), Query Frame = 1
Query:   31 VRASLXNLGVTYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKFLEGLVDSGLVRAIGVSNFGVSQI-KELLKFAKIMPAVNQVELHPFWRQDELVKFCQSKGIHVSAHTPLGVXXXXXXXXXXXXXXXXXXXXPRISFXRSRSVHGPMLKLSVVSEIADKHKKTPEQGILRWGLQRGTSVLPCXLKPDRIRKNI 645
            ++ SL  L   Y+DL L+HWP       GDA            +F+  L +A K        GL R IG+SNF +  + K +        A NQ+EL P+ +  ++V + ++ GIH++++  L                                 +G  LK  V++ IA KH  TP Q IL W +  G SV+P   + + +  ++
Sbjct:   79 LKESLKKLRTDYVDLTLIHWPSP-----GDAVSV--------EEFMQALLEAKK-------QGLTREIGISNFTIPLMEKAIAAVGADNIATNQIELSPYLQNRKVVDWAKAHGIHITSYMTL--------------------------------AYGKALKDEVIARIAAKHNATPAQVILAWAMGEGYSVIPSSTRRENLASSL 232          
BLAST of EY659448 vs. ExPASy Swiss-Prot
Match: DKGB_YERPE (2,5-diketo-D-gluconic acid reductase B OS=Yersinia pestis GN=dkgB PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.338e-11
Identity = 57/206 (27.67%), Postives = 86/206 (41.75%), Query Frame = 1
Query:   31 VRASLXNLGVTYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKFLEGLVDSGLVRAIGVSNFGVSQIKELLKFAKIMP-AVNQVELHPFWRQDELVKFCQSKGIHVSAHTPLGVXXXXXXXXXXXXXXXXXXXXPRISFXRSRSVHGPMLKLSVVSEIADKHKKTPEQGILRWGLQRGTSVLPCXLKPDRIRKNI 645
            +R S+  L   Y+DL L+HWP             P+   S   +F++ L KA    +GL   GL R IG+SNF +  +K+ +        A NQ+EL P  +   +V F +  GI V+++  L                                 +G  L   V+  IA++H  TP Q IL W +Q G  V+P   K   +  N+
Sbjct:   79 LRESIQKLKTDYVDLTLIHWPS------------PNDEVSV-AEFMSELLKA----KGL---GLTRQIGISNFTIDLMKQAIAAVGAEEIATNQIELSPLLQNRNVVDFAKQNGIAVTSYMTL--------------------------------AYGKALAEPVIKTIAEQHGATPAQVILSWAMQLGYGVIPSSTKAANLASNL 232          
The following BLAST results are available for this feature:
BLAST of EY659448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 125
Match NameE-valueIdentityDescription
DKGB_ECO573.360e-1227.182,5-diketo-D-gluconic acid reductase B OS=Escheric... [more]
DKGB_SALTI4.389e-1227.182,5-diketo-D-gluconic acid reductase B OS=Salmonel... [more]
DKGB_ECOLI7.486e-1227.182,5-diketo-D-gluconic acid reductase B OS=Escheric... [more]
DKGB_SALTY9.777e-1226.702,5-diketo-D-gluconic acid reductase B OS=Salmonel... [more]
DKGB_YERPE6.338e-1127.672,5-diketo-D-gluconic acid reductase B OS=Yersinia... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-C04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659448 ID=EY659448; Name=EY659448; organism=Citrus sinensis; type=EST; length=965bp
GCGNATTACAAGCCCGACCCACTCGTCCGCGTCAGAGCTTCTCTTAGNAA
TCTTGGAGTTACATACTTGGATCTCTATTTAATGCATTGGCCTGAGTGCT
CTGCTTCTGGTTTTGGGGATGCTACTGATCCTCCTTCTAAGTCCGGGAGT
GAGCGTAGGCAGTTTTTAAATCGCTTGAAGAAAGCATGGAAATTTCTGGA
AGGTCTCGTGGACTCGGGATTGGTCAGAGCTATTGGTGTCAGTAATTTTG
GGGTTTCACAGATCAAAGAGTTGCTTAAATTTGCCAAAATTATGCCTGCG
GTGAATCAGGTGGAGTTGCATCCTTTTTGGAGGCAGGATGAACTAGTAAA
ATTCTGTCAATCTAAAGGTATCCATGTATCTGCTCACACACCTTTAGGTG
TACCTACTTCAAGTCCTGGAACATCTGACAGTGGATCAGGCGGGGAAGAT
GAAACTGGAACTCCACGCATATCATTTANAAGGTCAAGATCGGTGCATGG
GCCAATGCTGAAATTATCGGTCGTTTCAGAGATAGCAGATAAGCACAAGA
AAACACCTGAGCAGGGTATTCTACGCTGGGGACTGCAAAGGGGTACAAGT
GTCCTACCTTGCANCTTGAAGCCTGATCGGATAAGGAAAAACATAGACAT
TTTCAGTTGGTCTCTGTCAAACGATGAGTGGAACCGCTTGAACCANATTG
AACCGCNAGTATGTTTATTTGGAAACGAGCCTTTGAATTAACTGCCAGCC
TCAGACAGGGCCTTCACATTTGGTAGCGGTCCCCTTAATTTGTGCGGGAA
ATGGAGATGAGTGGGAGTCCAAGCCCGAATTTTTCCTGAGATATGGGCCT
TCTTTTTTTTTTTCCCCAAGATGGATCAATTCCAGTTGCCAAACCCCTTG
TGAAAATATGTCCGGGGACCCGNATAATGGCAAAAAGGGTTTGGTTGAAA
AAAAAAAAAAAAAAA
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