EY659440

Overview
NameEY659440
Unique NameEY659440
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length920
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_ANATD (Trigger factor OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=tig PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.630e-19
Identity = 67/221 (30.32%), Postives = 115/221 (52.04%), Query Frame = 3
Query:  114 LPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREV-EQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVEN-------SIAELKQQKPEYDEGSRREQVI 752
            +PGF + + G+ +GE K   + FPE +++  L G +A F V+ +++  ++LP+LDD  A K +    T+E++K  +  + RE  ++ AKD+  D AIL+++ +   IDIP+ + E Q           +Q      E+ L A+   K  KEF     E     ++ NL +  I K EN+Q + E+L KE+E         + +LK++  E D    +E +I
Sbjct:  196 IPGFEEQLIGMNKGEEKEIEVTFPEDYQEPSLAGKKATFKVKVKDIKVKELPELDDEFA-KDVSEFETLEELKANIRNRIREKNDKRAKDEMID-AILEKIAQNTSIDIPEPMIENQINYYVEDVARNLQYFGMTYERYLQAIG--KTDKEFRSQFRERAEKAVRNNLILEKIAKVENIQATEEELQKELERLAKMYNLEVDKLKERLSEDDIEYIKEGII 412          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_STAHJ (Trigger factor OS=Staphylococcus haemolyticus (strain JCSC1435) GN=tig PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.485e-19
Identity = 70/245 (28.57%), Postives = 123/245 (50.20%), Query Frame = 3
Query:   87 FDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLL-----QKCREVEQTAKDQ----ATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVEN-------SIAELKQQKPEYD---EGSRREQVIDIL 761
            +D E G    +PGF D + G++ GE K   + FPE +  E L G +A F  +  E+ Y+++P+LDD +A +L     ++++ KE L      QK  E E   K++    ATDNA +D    M++ ++ + + +E G+++   Q L +Q   +++ Q  + L          E   ++    IK NL +  I  +EN++ + ED+ KE+E        S+ ++K      D      R ++VID+L
Sbjct:  187 YDLEIGSGSFIPGFEDQLVGVKTGEEKDVVVTFPEEYHAEELAGKKATFKTKVNEIKYKEVPELDDEIANELDSDANSVDEYKENLRKRLSEQKAEEAENVEKEEAINKATDNATIDIPQAMIDTELDR-MVQEFGQRIQ-QQGLDLQTYFQISGQDESQLR---------EQMKDDAEQRIKTNLTLSAIADKENIEANDEDIDKELEKMSKQFNISVEDIKNTLGNTDIIKNDVRIQKVIDLL 420          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_SYNS3 (Trigger factor OS=Synechococcus sp. (strain CC9311) GN=tig PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.305e-18
Identity = 69/270 (25.56%), Postives = 136/270 (50.37%), Query Frame = 3
Query:   57 IPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQA----TDN---AILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQM-QAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPEYDEGSRREQVIDILEGS*SLEWVRDMQKIS-XXPDENIPHI 839
            I    ++    D E G +++PGF++ + G+  G++K+    FPE + +E  RG +A F +E ++L  R+LP LDD  A +           +ETL +   ++E+  KD A    T N   A+L  L + +E+++P++L +++ R L      Q  Q GM      + +L +P  V+  +E         ++++LA+  + + E+L+    ++  +V+   A+L  ++ + D    R+ VI+ L     L W+ +   ++   PD++ P +
Sbjct:  192 IEGGSSESMDVDLEHG-RMIPGFIEGVVGMTVGDSKTVACNFPEDYPKEDARGRKASFEIELKDLKTRELPDLDDDFAKQ--------ASEQETLAELRTDLEKRLKDDAERRTTSNRRDALLAALVEQLEVELPETLVQQEVRNLVEQTAAQFSQQGM-----DVKSLFTPDLVRNLMETSRPEAEERLRRSLALSALAEAESLKIEDPEIDAKVKEVTAQLSGER-DIDPNRLRQAVIEDLLQEKLLGWLEENSTVTEKAPDKDKPSV 446          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_MICAN (Trigger factor OS=Microcystis aeruginosa (strain NIES-843) GN=tig PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.305e-18
Identity = 63/258 (24.42%), Postives = 133/258 (51.55%), Query Frame = 3
Query:   51 QNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQ-MQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPEYDEGSRREQVI-DILEGS*SLEWVRDMQKISXXP 818
            ++IPD + +    D E G + + G ++ I G++  E K   L FPE + +E +      FT+  +EL  ++LP+LDD  A + +    TI +++ +L ++ +E  +    ++ D+A+  +L K   +D+P++L E++   +     +Q  Q G+ +N+     L +   + +  EN   +    +K+ L V ++ K   ++ S E + +++ N +++L  +  +     R EQVI + +    +LEW+++   I+  P
Sbjct:  185 EDIPDIDGEDLRVDMEAG-RFIEGMVEGIIGMKPEEVKEMTLTFPEDYPKEDVAAKAVIFTITMKELKAKELPELDDDFAQE-VSDQETIAELRASLEKRFQEQAEKETKESIDDALTKELVKGATLDLPETLIEKEVTHILTQSFMQFQQMGLDVNQ-----LFTKDNIPKMRENARPDAIESLKETLVVQELAKVAGIEVSPEAVAEKIANIMSQLSDRDIDM---QRLEQVITEEMLAENTLEWLKEKATITLVP 432          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_SYNPW (Trigger factor OS=Synechococcus sp. (strain WH7803) GN=tig PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.704e-18
Identity = 65/261 (24.90%), Postives = 134/261 (51.34%), Query Frame = 3
Query:   66 AETKGFHFDTEDGD----KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNE-QQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDL---VKEVENSIAELKQQKPEYDEGSRREQVIDILEGS*SLEWVRDMQKISXXPDE 824
            +E +G   D+ D D    +++PGF++ + G+  G++K+    FPE + +E  RG +A F +E ++L  R+LP+LDD+ A K      T+ +++  L Q+ ++  +        +A+L  L + +E+++P+SL +++ R      L++  AG    +   + +L +P+ V+  +E+        ++++LA+  + + E L     DL   +KEV+  ++  +   PE      R+ V+D L     L W+ +   ++    E
Sbjct:  190 SEIEGGSADSMDVDLEHGRMIPGFVEGVVGMAVGDSKTVDCTFPEDYPKEDARGRKASFAIELKDLKTRELPELDDAFA-KQASEQETLAELRSDLEQRLKDDAERRSRSNRHDALLAALVEQLEVELPESLIQQEVR-----NLVEQTAGQFAQQGMDVQSLFTPELVRNLMESSRPEAEERLRRSLALTALAESEKLSVDDADLNAKLKEVKGQLSGERDIDPE----RLRQAVLDDLLQEKLLGWLEENSTVTEKAPE 440          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_CYAP8 (Trigger factor OS=Cyanothece sp. (strain PCC 8801) GN=tig PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.907e-18
Identity = 67/264 (25.38%), Postives = 136/264 (51.52%), Query Frame = 3
Query:   30 DADESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPEYDEGSRREQVIDILEGS*SLEWVRDMQKISXXPD 821
            + +E+  + IP  + + F  D  +G + + G ++ I G+Q  ET+   + FP  + +E L G  A F +  +EL  ++LP+LDD  A + +    TI +++E+L ++  E  Q A  ++  +A++ QL ++  +D+P +L E++  Q+     +QM+  M ++ +QL    +   + +  EN   +  + +KQ+L + +I K E++      LV+E  N I E   ++ + D     + V + L     L W+++   +   P+
Sbjct:  184 EGEETERKPIPGVQGQDFRVDLTEG-RFIQGMVEGIVGMQPEETQEITVTFPSDYPREDLAGQVAIFKITVKELKAKELPELDDDFAEE-VSEFATIAELRESLEKQFTEEAQEATKKSIHDAMITQLLEICPVDLPNTLIEDEVTQVLTQTAMQMEQ-MGIDIRQLFVKEN---IPKLRENARPDAISRLKQSLILQEIAKVESIT-PEASLVEERINKIKEQLSER-DVDFDKLEQMVTEELTMEAILNWLQEKATVELVPE 439          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_SYNP6 (Trigger factor OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=tig PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.797e-18
Identity = 64/254 (25.20%), Postives = 121/254 (47.64%), Query Frame = 3
Query:    3 IVDISATTIDADESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPEYDEGSRREQVIDILE 764
            ++D     +++ E     IP      F  + E+ D+ +PGF+  I G+   ET++    FPE++ QE + G  AQFT+  +EL  RDLP+LDD+ A +      TIE++K  L ++ +   ++    +  +AIL  L   ++++IP+SL + +      A + +  + +      +  L + + ++   EN  +     +++ +A+G++ K    Q   E     V+   AEL    P   E  R   +  + E
Sbjct:  175 VIDFQGILVESGEE----IPGGSGTDFQIEVEE-DRFIPGFISGIVGMAIEETRTVDATFPETYAQEEVAGKAAQFTITLKELKTRDLPELDDAFAQE-ASQYETIEELKTALTERFQAEHESEVKASKRDAILTALADQLDVEIPESLLQRE----ISAMINETASRLSGQGMDVRKLFTEEVLERLRENSKDEDEQRLRRTIALGELAKVTETQVDDE----AVKARAAELLSNYPRPQEVDRDRLITVVRE 414          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_SYNE7 (Trigger factor OS=Synechococcus elongatus (strain PCC 7942) GN=tig PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.797e-18
Identity = 63/245 (25.71%), Postives = 118/245 (48.16%), Query Frame = 3
Query:    3 IVDISATTIDADESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPEYDEGSR 737
            ++D     +++ E     IP      F  + E+ D+ +PGF+  I G+   ET++    FPE++ QE + G  AQFT+  +EL  RDLP+LDD+ A +      TIE++K  L ++ +   ++    +  +AIL  L   ++++IP+SL + +      A + +  + +      +  L + + ++   EN  +     +++ +A+G++ K    Q   E     V+   AEL    P   E  R
Sbjct:  175 VIDFQGILVESGEE----IPGGSGTDFQIEVEE-DRFIPGFISGIVGMAIEETRTVDATFPETYAQEEVAGKAAQFTITLKELKTRDLPELDDAFAQE-ASQYETIEELKTALTERFQAEHESEVKASKRDAILTALADQLDVEIPESLLQRE----ISAMINETASRLSGQGMDVRKLFTEEVLERLRENSKDEAEQRLRRTIALGELAKVTETQVDDE----AVKARAAELLSNYPRPQEIDR 405          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_DEHSC (Trigger factor OS=Dehalococcoides sp. (strain CBDB1) GN=tig PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.959e-18
Identity = 56/231 (24.24%), Postives = 117/231 (50.65%), Query Frame = 3
Query:  117 PGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPE----YDEGSRREQVIDILEGS*SLEWVRDM 797
            PGF D +  +  GE K F + FPE   +  L G  A F V  RE+    LP+L+D+ A +L P   T+ ++++ + +  ++ +        ++ I++ L KM +ID P+ + E +  Q+   QL ++Q+ +K + ++  A+ S    ++  +         +  +L +G +   ENL  + E++  E+E  I +   +K E    Y++   R+++I +L    ++ ++ ++
Sbjct:  194 PGFGDCLVDMVAGEPKEFSIVFPEDHARAELAGKTAAFKVTVREIKEEKLPELNDAFAHELNPEFNTLSELRQRIRENMQDRQDDKAQAKFEDQIVEALIKMSKIDYPEVMVEAELDQIIEQQLQRLQSNVK-SPEEFRAMLSQMTPEDMQQRYRPLAEQRVASSLVLGKLATTENLVPNDEEVDAEIEKLITDAGDKKEEEKALYNQSETRDRLIQLLTARKTMAFIDEI 423          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_PROMA (Trigger factor OS=Prochlorococcus marinus GN=tig PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.477e-18
Identity = 57/238 (23.95%), Postives = 122/238 (51.26%), Query Frame = 3
Query:   75 KGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPEYDEGSRREQVIDILEGS*SLEWV 788
            +    D E+G +++PGF++ I G++  ETK+    FP+ ++ E  +G +A+F ++ ++L  R+LPKLDD  A K      ++++++  L  + +   +    +    ++L+ L K +E+D+P++L +E+ R L    + Q           + +  +   V   +E+        +K+NLA+  + + EN++  ++ L ++++    EL  QK   D+   R+ V + L      +W+
Sbjct:  198 ESMEIDLEEG-RMIPGFIEGIVGMKINETKTIDCQFPKDYQDEKAKGRKAKFDIQLQDLKTRELPKLDDDFA-KQASDKNSLKELRNELTNRLKSDAKNRNKKNRQESLLEALVKELEVDLPKTLIDEEVRNL----IEQTARNFAEQGMDIKSTFTQDLVSSLMESSRPEAEINLKKNLALNALAEAENIKVDSQALEEKIKEVNIELANQK-NIDQKKLRQVVQNDLLQEKLFDWL 428          
The following BLAST results are available for this feature:
BLAST of EY659440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
TIG_ANATD2.630e-1930.32Trigger factor OS=Anaerocellum thermophilum (strai... [more]
TIG_STAHJ4.485e-1928.57Trigger factor OS=Staphylococcus haemolyticus (str... [more]
TIG_SYNS31.305e-1825.56Trigger factor OS=Synechococcus sp. (strain CC9311... [more]
TIG_MICAN1.305e-1824.42Trigger factor OS=Microcystis aeruginosa (strain N... [more]
TIG_SYNPW1.704e-1824.90Trigger factor OS=Synechococcus sp. (strain WH7803... [more]
TIG_CYAP82.907e-1825.38Trigger factor OS=Cyanothece sp. (strain PCC 8801)... [more]
TIG_SYNP63.797e-1825.20Trigger factor OS=Synechococcus sp. (strain ATCC 2... [more]
TIG_SYNE73.797e-1825.71Trigger factor OS=Synechococcus elongatus (strain ... [more]
TIG_DEHSC4.959e-1824.24Trigger factor OS=Dehalococcoides sp. (strain CBDB... [more]
TIG_PROMA6.477e-1823.95Trigger factor OS=Prochlorococcus marinus GN=tig P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-B07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659440 ID=EY659440; Name=EY659440; organism=Citrus sinensis; type=EST; length=920bp
CAATCGTTGATATATCAGCAACAACAATAGATGCAGATGAATCAAATGTT
CAAAATATTCCAGATGCAGAGACCAAAGGATTTCATTTTGATACAGAAGA
TGGGGACAAAGTTCTTCCAGGTTTTCTTGATTCTATAAGTGGAATTCAAC
GAGGTGAAACAAAGTCCTTTCGACTCGCATTCCCTGAATCCTGGAGACAA
GAACATCTTCGTGGTGTTCAAGCTCAATTTACTGTTGAATGCAGAGAACT
GTTTTATAGAGATTTGCCGAAATTGGATGACTCCCTTGCTGGAAAGCTTC
TTCCTGGATGCACTACCATAGAGCAGGTCAAGGAAACATTATTGCAGAAG
TGTCGAGAAGTGGAGCAAACTGCAAAAGACCAGGCGACTGATAATGCAAT
TCTAGACCAGCTTTACAAGATGGTGGAAATTGATATTCCTCAATCCTTGT
TTGAGGAACAAGGAAGGCAGCTTTATGGGGCTCAACTTTTGCAGATGCAG
GCAGGTATGAAATTGAACGAACAGCAGTTGGCTGCTCTATCAAGCCCAAA
AGCAGTAAAAGAGTTTCTGGAAAACCAGACGGAGAACATAACCAATGTGA
TAAAACAGAATCTAGCCGTCGGAGATATCTTTAAACGTGAAAATTTGCAG
TTTTCGACTGAAGACTTAGTCAAAGAAGTTGAAAACTCCATTGCTGAATT
AAAACAACAGAAACCAGAATATGATGAGGGATCGCGTAGAGAACAGGTGA
TAGACATACTCGAAGGGAGCTAAAGTCTCGAATGGGTGAGAGACATGCAG
AAAATCAGTNCANACCCAGATGAGAACATACCCCATATATGAAAAGGAGC
TAGGAGTTGCAGGAGCCGGATTAAAATTGCATTGCAGAGCATTGGTGCTC
TGCAAATTTTGATTGAAAAA
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