EY659440

Overview
NameEY659440
Unique NameEY659440
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length920
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_DESRM (Trigger factor OS=Desulfotomaculum reducens (strain MI-1) GN=tig PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.264e-13
Identity = 50/203 (24.63%), Postives = 103/203 (50.74%), Query Frame = 3
Query:  114 LPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQM-QAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPE 719
            +PGF + + G++ GE K   + FPE +  E+L G  A F V+  E+  ++L  LDD  A K +    T++++K  + +K  EV +     + +N  ++   +   ++IPQ++  ++  ++  +   ++ Q G+ L++      +S   +++ +    E     +K  L +  I K EN+  + E+  +E++  IAE  +Q  E
Sbjct:  197 IPGFEEQLLGVKLGEEKEVNVTFPEEYHAENLAGKPATFKVKINEIKRKELASLDDEFA-KDVSEFDTLDELKSDIRKKLMEVAERTAKSSVENGAVEAAVEKATVEIPQAMISQKVEEMLNSMGQRLAQQGINLDQYFQYTNTSMDDMRQRMRPDAE---KNVKNELVLDAIAKVENITATAEETNEEIQ-KIAEYVKQDAE 394          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_BACA2 (Trigger factor OS=Bacillus amyloliquefaciens (strain FZB42) GN=tig PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.264e-13
Identity = 53/191 (27.75%), Postives = 96/191 (50.26%), Query Frame = 3
Query:  114 LPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFE-EQGRQLYG-AQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEV 680
            +PGF + ++G++ G  K   + FPE +  E L G  A F V+  E+  ++LP+L+D  A  +     T+ ++ E   ++  E ++   D      ++ +  +  E D+PQ++ + E  R L    Q LQMQ GM L      +     A+KE ++   E+    +K NL +  I + ENL+ + E++  E+
Sbjct:  197 IPGFEEQLTGLEAGAEKDVEVTFPEEYHAEELAGKPAVFKVKIHEIKAKELPELNDEFAKDIDEEVETLAELTEKTKKRLEEAKENEADAKLREELVLKASENAEADVPQAMIDTELDRMLKEFEQRLQMQ-GMNLELYTQFSGQDENALKEQMK---EDAAKRVKSNLTLEAIAQAENLEVTDEEVEAEL 383          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_MACCJ (Trigger factor OS=Macrococcus caseolyticus (strain JCSC5402) GN=tig PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.651e-13
Identity = 50/213 (23.47%), Postives = 103/213 (48.36%), Query Frame = 3
Query:   45 NVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFE-EQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEV 680
            N +     + +G+  +   G + +PGF + + G + G+ K   + FPE +  E L G +A F V+  E+  +++P+LDD +A +L     +++  KE   +  +E +    +     +++ Q  +  ++DIP+++   E  R +   +    Q G+ L   +L    S +  ++  E+   +    +K NL +  I K EN++ S  D+  E+
Sbjct:  175 NEEAFEGGKAEGYDLEIGSG-QFIPGFEEQLVGTKVGDEKDVTVTFPEEYHAEELAGKEAVFKVKINEVKSKEVPELDDEMAKELDESVDSVDAYKEKYKKDLQEQKTLQAENNMKESLIAQAVENAKVDIPEAMINTELDRMMQEFEQRIAQQGLNL---ELYYQFSGQTEEQLKESMKADAEARVKTNLTLAAIAKAENIEISDTDVDAEL 383          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_CLOPS (Trigger factor OS=Clostridium perfringens (strain SM101 / Type A) GN=tig PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.651e-13
Identity = 48/217 (22.12%), Postives = 112/217 (51.61%), Query Frame = 3
Query:  114 LPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQM-QAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPEYDEGSRREQVIDIL 761
            +  F + + G++ GE+K   + FPE++ +E L G  A+F V  +E+  ++LP LDD  A K +    T+E++K  L +K  +  +    +  +  +++ +    +++IP+++   +   +     +++ Q G+ L +      S+   +K +++   EN    +K +L +  + + E ++ +TE+ +K     +A++      Y  G+  E+++D+L
Sbjct:  197 IDNFEEQLIGLKVGESKDVNVTFPEAYGKEDLNGKPAKFEVTVKEIKVKELPALDDEFA-KEVSEFDTLEELKADLKEKAVKANELRAKREMEEKVINAVVDNAKVEIPEAMINREVENMVRDLEMRLGQQGLSLEQYYEFTGSTEDKMKSYMK---ENAERKVKTDLVMSAVTEAEAIE-ATEEELKAKAEEVAKM------YSNGAETEKMVDLL 402          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_CLOPE (Trigger factor OS=Clostridium perfringens GN=tig PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.651e-13
Identity = 48/217 (22.12%), Postives = 112/217 (51.61%), Query Frame = 3
Query:  114 LPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQM-QAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPEYDEGSRREQVIDIL 761
            +  F + + G++ GE+K   + FPE++ +E L G  A+F V  +E+  ++LP LDD  A K +    T+E++K  L +K  +  +    +  +  +++ +    +++IP+++   +   +     +++ Q G+ L +      S+   +K +++   EN    +K +L +  + + E ++ +TE+ +K     +A++      Y  G+  E+++D+L
Sbjct:  197 IDNFEEQLVGLKVGESKDVNVTFPEAYGKEDLNGKPAKFEVTVKEIKVKELPALDDEFA-KEVSEFDTLEELKADLKEKAVKANELRAKREMEEKVINAVVDNAKVEIPEAMINREVENMVRDLEMRLGQQGLSLEQYYEFTGSTEDKMKSYMK---ENAERKVKTDLVMSAVTEAEAIE-ATEEELKAKAEEVAKM------YSNGAETEKMVDLL 402          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_CLOP1 (Trigger factor OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=tig PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.651e-13
Identity = 48/217 (22.12%), Postives = 112/217 (51.61%), Query Frame = 3
Query:  114 LPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQM-QAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPEYDEGSRREQVIDIL 761
            +  F + + G++ GE+K   + FPE++ +E L G  A+F V  +E+  ++LP LDD  A K +    T+E++K  L +K  +  +    +  +  +++ +    +++IP+++   +   +     +++ Q G+ L +      S+   +K +++   EN    +K +L +  + + E ++ +TE+ +K     +A++      Y  G+  E+++D+L
Sbjct:  197 IDNFEEQLVGLKVGESKDVNVTFPEAYGKEDLNGKPAKFEVTVKEIKVKELPALDDEFA-KEVSEFDTLEELKADLKEKAVKANELRAKREMEEKVINAVVDNAKVEIPEAMINREVENMVRDLEMRLGQQGLSLEQYYEFTGSTEDKMKSYMK---ENAERKVKTDLVMSAVTEAEAIE-ATEEELKAKAEEVAKM------YSNGAETEKMVDLL 402          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_PROMS (Trigger factor OS=Prochlorococcus marinus (strain AS9601) GN=tig PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.816e-13
Identity = 53/208 (25.48%), Postives = 115/208 (55.29%), Query Frame = 3
Query:  105 DKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCRE-VEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALS--SPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDL---VKEVENSIAELKQQ 710
            +K++PGF++ I  ++ G+TK+  L FP+ +  E  RG +A F V  ++L  ++LP+L+D  A K      +++++K+ + ++ ++  E+T KD   + A+LD L   +  +IP+S+ + + R          Q   +  +Q L   S  +P+ VK   ++        +++NLA+  + + EN++   +++   +K+ E++I++  +Q
Sbjct:  207 NKMIPGFVEGIVKMKIGDTKTLNLKFPDDYSHEDSRGKEAIFEVNLKDLKEKELPELNDDFA-KQSGNKESLKELKKDIEKQLKDNFEKTQKDIKIE-ALLDALTNELVAEIPKSMIDIEVRNNI------EQTAQRFAQQGLDVKSTFTPELVKSLADSTRPQAEKNVQRNLALKALAETENIKVEQDEIDSKMKDYEDAISQSSKQ 406          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_BACHK (Trigger factor OS=Bacillus thuringiensis subsp. konkukian GN=tig PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.816e-13
Identity = 48/191 (25.13%), Postives = 93/191 (48.69%), Query Frame = 3
Query:  114 LPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFE-EQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVE 683
            +PGF + + G++ GE+K   ++FPE +    L G  A F V   E+  ++LP+L+D  A +      T++++K  L     E ++   +    + +++      EIDIP+++ + E  R +   +    Q GM L   +L    +     +  E   E+    ++ NL +  I + EN++ + E++  EVE
Sbjct:  197 IPGFEEQVIGLKSGESKDVEVSFPEEYHAAELAGKPATFKVTVHEIKTKELPELNDEFAKEADEAVATLDELKAKLRTNLEEGKKHEAEHKVRDEVVELAAANAEIDIPEAMIDTELDRMVREFEQRLSQQGMNL---ELYYQFTGTDADKLKEQMKEDAQKRVRINLVLEAIIEAENIEVTEEEVTAEVE 384          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_BACCZ (Trigger factor OS=Bacillus cereus (strain ZK / E33L) GN=tig PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.816e-13
Identity = 48/191 (25.13%), Postives = 93/191 (48.69%), Query Frame = 3
Query:  114 LPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFE-EQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVE 683
            +PGF + + G++ GE+K   ++FPE +    L G  A F V   E+  ++LP+L+D  A +      T++++K  L     E ++   +    + +++      EIDIP+++ + E  R +   +    Q GM L   +L    +     +  E   E+    ++ NL +  I + EN++ + E++  EVE
Sbjct:  197 IPGFEEQVIGLKSGESKDVEVSFPEEYHAAELAGKPATFKVTVHEIKTKELPELNDEFAKEADEAVATLDELKAKLRTNLEEGKKHEAEHKVRDEVVELAAANAEIDIPEAMIDTELDRMVREFEQRLSQQGMNL---ELYYQFTGTDADKLKEQMKEDAQKRVRINLVLEAIIEAENIEVTEEEVTAEVE 384          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_BACC3 (Trigger factor OS=Bacillus cereus (strain 03BB102) GN=tig PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.816e-13
Identity = 48/191 (25.13%), Postives = 93/191 (48.69%), Query Frame = 3
Query:  114 LPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFE-EQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVE 683
            +PGF + + G++ GE+K   ++FPE +    L G  A F V   E+  ++LP+L+D  A +      T++++K  L     E ++   +    + +++      EIDIP+++ + E  R +   +    Q GM L   +L    +     +  E   E+    ++ NL +  I + EN++ + E++  EVE
Sbjct:  197 IPGFEEQVIGLKSGESKDVEVSFPEEYHAAELAGKPATFKVTVHEIKTKELPELNDEFAKEADEAVATLDELKAKLRTNLEEGKKHEAEHKVRDEVVELAAANAEIDIPEAMIDTELDRMVREFEQRLSQQGMNL---ELYYQFTGTDADKLKEQMKEDAQKRVRINLVLEAIIEAENIEVTEEEVTAEVE 384          
The following BLAST results are available for this feature:
BLAST of EY659440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
TIG_DESRM1.264e-1324.63Trigger factor OS=Desulfotomaculum reducens (strai... [more]
TIG_BACA21.264e-1327.75Trigger factor OS=Bacillus amyloliquefaciens (stra... [more]
TIG_MACCJ1.651e-1323.47Trigger factor OS=Macrococcus caseolyticus (strain... [more]
TIG_CLOPS1.651e-1322.12Trigger factor OS=Clostridium perfringens (strain ... [more]
TIG_CLOPE1.651e-1322.12Trigger factor OS=Clostridium perfringens GN=tig P... [more]
TIG_CLOP11.651e-1322.12Trigger factor OS=Clostridium perfringens (strain ... [more]
TIG_PROMS2.816e-1325.48Trigger factor OS=Prochlorococcus marinus (strain ... [more]
TIG_BACHK2.816e-1325.13Trigger factor OS=Bacillus thuringiensis subsp. ko... [more]
TIG_BACCZ2.816e-1325.13Trigger factor OS=Bacillus cereus (strain ZK / E33... [more]
TIG_BACC32.816e-1325.13Trigger factor OS=Bacillus cereus (strain 03BB102)... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-B07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659440 ID=EY659440; Name=EY659440; organism=Citrus sinensis; type=EST; length=920bp
CAATCGTTGATATATCAGCAACAACAATAGATGCAGATGAATCAAATGTT
CAAAATATTCCAGATGCAGAGACCAAAGGATTTCATTTTGATACAGAAGA
TGGGGACAAAGTTCTTCCAGGTTTTCTTGATTCTATAAGTGGAATTCAAC
GAGGTGAAACAAAGTCCTTTCGACTCGCATTCCCTGAATCCTGGAGACAA
GAACATCTTCGTGGTGTTCAAGCTCAATTTACTGTTGAATGCAGAGAACT
GTTTTATAGAGATTTGCCGAAATTGGATGACTCCCTTGCTGGAAAGCTTC
TTCCTGGATGCACTACCATAGAGCAGGTCAAGGAAACATTATTGCAGAAG
TGTCGAGAAGTGGAGCAAACTGCAAAAGACCAGGCGACTGATAATGCAAT
TCTAGACCAGCTTTACAAGATGGTGGAAATTGATATTCCTCAATCCTTGT
TTGAGGAACAAGGAAGGCAGCTTTATGGGGCTCAACTTTTGCAGATGCAG
GCAGGTATGAAATTGAACGAACAGCAGTTGGCTGCTCTATCAAGCCCAAA
AGCAGTAAAAGAGTTTCTGGAAAACCAGACGGAGAACATAACCAATGTGA
TAAAACAGAATCTAGCCGTCGGAGATATCTTTAAACGTGAAAATTTGCAG
TTTTCGACTGAAGACTTAGTCAAAGAAGTTGAAAACTCCATTGCTGAATT
AAAACAACAGAAACCAGAATATGATGAGGGATCGCGTAGAGAACAGGTGA
TAGACATACTCGAAGGGAGCTAAAGTCTCGAATGGGTGAGAGACATGCAG
AAAATCAGTNCANACCCAGATGAGAACATACCCCATATATGAAAAGGAGC
TAGGAGTTGCAGGAGCCGGATTAAAATTGCATTGCAGAGCATTGGTGCTC
TGCAAATTTTGATTGAAAAA
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