EY659440

Overview
NameEY659440
Unique NameEY659440
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length920
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_BACCQ (Trigger factor OS=Bacillus cereus (strain Q1) GN=tig PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.678e-13
Identity = 48/191 (25.13%), Postives = 93/191 (48.69%), Query Frame = 3
Query:  114 LPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFE-EQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVE 683
            +PGF + + G++ GE+K   ++FPE +    L G  A F V   E+  ++LP+L+D  A +      T++++K  L     E ++   +    + +++      EIDIP+++ + E  R +   +    Q GM L   +L    +     +  E   E+    ++ NL +  I + EN++ + E++  EVE
Sbjct:  197 IPGFEEQLIGLKSGESKDVEVSFPEEYHAAELAGKPATFKVTVHEIKTKELPELNDEFAKEADEAVATLDELKAKLRTNLEEGKKHEAEHKVRDEVVELAAANAEIDIPEAMIDTELDRMVREFEQRLSQQGMNL---ELYYQFTGTDADKLKEQMKEDAQKRVRINLVLEAIIEAENIEVTEEEVTAEVE 384          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_BACC7 (Trigger factor OS=Bacillus cereus (strain AH187) GN=tig PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.678e-13
Identity = 48/191 (25.13%), Postives = 93/191 (48.69%), Query Frame = 3
Query:  114 LPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFE-EQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVE 683
            +PGF + + G++ GE+K   ++FPE +    L G  A F V   E+  ++LP+L+D  A +      T++++K  L     E ++   +    + +++      EIDIP+++ + E  R +   +    Q GM L   +L    +     +  E   E+    ++ NL +  I + EN++ + E++  EVE
Sbjct:  197 IPGFEEQLIGLKSGESKDVEVSFPEEYHAAELAGKPATFKVTVHEIKTKELPELNDEFAKEADEAVATLDELKAKLRTNLEEGKKHEAEHKVRDEVVELAAANAEIDIPEAMIDTELDRMVREFEQRLSQQGMNL---ELYYQFTGTDADKLKEQMKEDAQKRVRINLVLEAIIEAENIEVTEEEVTAEVE 384          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_VIBF1 (Trigger factor OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=tig PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.803e-13
Identity = 63/227 (27.75%), Postives = 115/227 (50.66%), Query Frame = 3
Query:   75 KGFHFDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKC-REVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPE---YDEGSRR 740
            K  +F  E G  +++PGF D I G + GE  +  + FPE +  E+L+G  AQF ++  ++  R+LP+L+D    K       +E +K  + +   RE+ Q  K++  + AI + L +   ID+P +L +++       Q+L+ QA  +       A ++P+  +E  E Q +    V    L +G++ K E L+ + ++ VK + N +A   +   E   Y EG+ +
Sbjct:  181 KAENFPLEMGQGRMIPGFEDGIKGKKAGEELTIDVNFPEEYHAENLKGKAAQFAIKVVKVESRELPELNDEFVAK-FGAEGGVEGLKAEVRKNMERELAQAVKNKIKEQAI-NGLVEQNNIDVPSALIDQE------VQVLRQQAVQRFGGN---ADTAPELPRELFEEQAKRRVVV---GLLLGEVIKSEELK-ADDEKVKALINEMASAYEDPTEVVAYYEGNEQ 392          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_STRS7 (Trigger factor OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=tig PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.803e-13
Identity = 53/211 (25.12%), Postives = 103/211 (48.82%), Query Frame = 3
Query:   75 KGFHFDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEI-DIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTE-NITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAE 698
            KG +F  E G  + +PGF + + G + G+T    + FPE+++ E L G  A+F     E+  +++P+LDD LA  +     T++++K    ++    ++ A D A + A ++   +  EI ++P+ +  ++  +     +  MQ    ++      L+     +E L  Q E      +K NL +  I K E  + S +++ KE+ +  AE
Sbjct:  183 KGDNFSLELGSGQFIPGFEEQLVGAKAGDTVEVNVTFPENYQAEDLAGKAAKFVTTVHEVKAKEVPELDDELAKDIDEEVETLDELKAKYRKELEASKEAAYDDALEGAAIELAVENAEIVELPEEMVHDEVHRSVNEFMASMQR-QGISPDMYFQLTGTS--QEDLHKQHEAEADKRVKTNLVIEAIAKAEGFEASDDEIEKEINDLAAE 390          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_STREM (Trigger factor OS=Streptococcus equi subsp. zooepidemicus (strain MGCS10565) GN=tig PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.803e-13
Identity = 53/211 (25.12%), Postives = 103/211 (48.82%), Query Frame = 3
Query:   75 KGFHFDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEI-DIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTE-NITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAE 698
            KG +F  E G  + +PGF + + G + G+T    + FPE+++ E L G  A+F     E+  +++P+LDD LA  +     T++++K    ++    ++ A D A + A ++   +  EI ++P+ +  ++  +     +  MQ    ++      L+     +E L  Q E      +K NL +  I K E  + S +++ KE+ +  AE
Sbjct:  183 KGDNFSLELGSGQFIPGFEEQLVGAKAGDTVEVNVTFPENYQAEDLAGKAAKFVTTVHEVKAKEVPELDDELAKDIDEEVETLDELKAKYRKELEASKEAAYDDALEGAAIELAVENAEIVELPEEMVHDEVHRSVNEFMASMQR-QGISPDMYFQLTGTS--QEDLHKQHEAEADKRVKTNLVIEAIAKAEGFEASDDEIEKEINDLAAE 390          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_STRE4 (Trigger factor OS=Streptococcus equi subsp. equi (strain 4047) GN=tig PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.803e-13
Identity = 53/211 (25.12%), Postives = 103/211 (48.82%), Query Frame = 3
Query:   75 KGFHFDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEI-DIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTE-NITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAE 698
            KG +F  E G  + +PGF + + G + G+T    + FPE+++ E L G  A+F     E+  +++P+LDD LA  +     T++++K    ++    ++ A D A + A ++   +  EI ++P+ +  ++  +     +  MQ    ++      L+     +E L  Q E      +K NL +  I K E  + S +++ KE+ +  AE
Sbjct:  183 KGDNFSLELGSGQFIPGFEEQLVGAKAGDTVEVNVTFPENYQAEDLAGKAAKFVATVHEVKAKEVPELDDELAKDIDEEVETLDELKAKYRKELEASKEAAYDDALEGAAIELAVENAEIVELPEEMVHDEVHRSVNEFMASMQR-QGISPDMYFQLTGTS--QEDLHKQHEAEADKRVKTNLVIEAIAKAEGFEASDDEIEKEINDLAAE 390          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_VIBVY (Trigger factor OS=Vibrio vulnificus (strain YJ016) GN=tig PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.273e-13
Identity = 60/217 (27.65%), Postives = 104/217 (47.93%), Query Frame = 3
Query:   75 KGFHFDTEDG-DKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKC-REVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPE 719
            K  +F  E G  +++PGF D I G  +G      + FPE +  E+L+G  A+F ++  ++  R LP+L+D    K       I+ +K  + +   RE++Q  K++  + AI D L K  EID+P +L +++        +L+ QA  +      AA+  P   +E  E Q +    V    L +G++ K   L+   E+ VK +   +A   +   E
Sbjct:  181 KAENFPLEMGAGRMIPGFEDGIEGKTKGMEFEIDVTFPEDYHAENLKGKAAKFAIKVNKVEARQLPELNDEFVAKFGVAEGGIDALKAEVRKNMERELKQAVKNRIKEQAI-DGLVKENEIDVPAALIDQE------INVLRQQAAQRFGGNVEAAMQLP---RELFEEQAKRRVVV---GLLLGEVIKAHELKVD-EEKVKAIITEMATAYEDPTE 383          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_VIBVU (Trigger factor OS=Vibrio vulnificus GN=tig PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.273e-13
Identity = 60/217 (27.65%), Postives = 104/217 (47.93%), Query Frame = 3
Query:   75 KGFHFDTEDG-DKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKC-REVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPE 719
            K  +F  E G  +++PGF D I G  +G      + FPE +  E+L+G  A+F ++  ++  R LP+L+D    K       I+ +K  + +   RE++Q  K++  + AI D L K  EID+P +L +++        +L+ QA  +      AA+  P   +E  E Q +    V    L +G++ K   L+   E+ VK +   +A   +   E
Sbjct:  181 KAENFPLEMGAGRMIPGFEDGIEGKTKGMEFEIDVTFPEDYHAENLKGKAAKFAIKVNKVEARQLPELNDEFVAKFGVAEGGIDALKAEVRKNMERELKQAVKNRIKEQAI-DGLVKENEIDVPAALIDQE------INVLRQQAAQRFGGNVEAAMQLP---RELFEEQAKRRVVV---GLLLGEVIKAHELKVD-EEKVKAIITEMATAYEDPTE 383          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_LACH4 (Trigger factor OS=Lactobacillus helveticus (strain DPC 4571) GN=tig PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.273e-13
Identity = 55/206 (26.70%), Postives = 103/206 (50.00%), Query Frame = 3
Query:  114 LPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEID-IPQSLFEE----QGRQLYG---AQLLQMQAGMKL---NEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAE 698
            +PGF D + G + G+     + FP+ +  + L G +A F  +  E+  + LPKLDD  A  +     T++++K+ + ++ ++ ++ A + A   A ++   K   +D IP ++ ++    Q  Q  G    Q +  Q   KL   NEQQL +        +F +N  E     +K NL +  I ++E L+ + E++ KE+++  AE
Sbjct:  196 IPGFEDQLIGHEAGDDVDVVVTFPKDYGAKDLAGKEAHFATKIHEVKSKQLPKLDDEFAKDVDDSVDTLDELKDKIKKQLKDQKEQAANDAIQEAAIEGAVKNATVDEIPDAMIQDDVDTQLNQYLGNMQRQGIDPQTYYKLTNTNEQQLRS--------QFAKNAAER----VKTNLVLEAIVEKEGLKATKEEIDKEIKDLAAE 389          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_CLOPH (Trigger factor OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=tig PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.273e-13
Identity = 66/257 (25.68%), Postives = 116/257 (45.14%), Query Frame = 3
Query:    3 IVDISATTIDADESNVQNIPDAETKGFHFDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYG--AQLLQMQAGMKLNEQ-QLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPEYDE---GSRREQVI 752
            ++D    TID  E  V  +     KG  +    G    +  F D + G   GE     + FP  +    L G  A F V+ +E+  ++LP  DD  AG  +    T+E+ K  L +   E +  A   A ++A++D++ +   ++IP ++ + Q RQ+    AQ L+MQ G+ L +  Q   L+       F+EN        I+  L +  + K EN+  S E++ KE+    +  + +  +  E      +EQ++
Sbjct:  160 VMDKDIVTIDF-EGFVDGVAFEGGKGEDYALTIGSHSFIDTFEDQLVGKNIGEDVEVNVTFPTEYHAADLAGKPALFKVKVKEIKAKELPAADDEFAGD-VSEFNTLEEYKADLKKSLTEKKDKAAKTAKEDAVVDKVIENATMEIPDAMVDTQKRQMAEDFAQRLKMQ-GLSLEQYFQFTGLNP----NTFMENLGPQALKRIQSRLVLEAVVKAENITVSVEEIDKELAEMASAYQMEVDKLKELIGEKEKEQIV 409          
The following BLAST results are available for this feature:
BLAST of EY659440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
TIG_BACCQ3.678e-1325.13Trigger factor OS=Bacillus cereus (strain Q1) GN=t... [more]
TIG_BACC73.678e-1325.13Trigger factor OS=Bacillus cereus (strain AH187) G... [more]
TIG_VIBF14.803e-1327.75Trigger factor OS=Vibrio fischeri (strain ATCC 700... [more]
TIG_STRS74.803e-1325.12Trigger factor OS=Streptococcus equi subsp. zooepi... [more]
TIG_STREM4.803e-1325.12Trigger factor OS=Streptococcus equi subsp. zooepi... [more]
TIG_STRE44.803e-1325.12Trigger factor OS=Streptococcus equi subsp. equi (... [more]
TIG_VIBVY6.273e-1327.65Trigger factor OS=Vibrio vulnificus (strain YJ016)... [more]
TIG_VIBVU6.273e-1327.65Trigger factor OS=Vibrio vulnificus GN=tig PE=3 SV... [more]
TIG_LACH46.273e-1326.70Trigger factor OS=Lactobacillus helveticus (strain... [more]
TIG_CLOPH6.273e-1325.68Trigger factor OS=Clostridium phytofermentans (str... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-B07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659440 ID=EY659440; Name=EY659440; organism=Citrus sinensis; type=EST; length=920bp
CAATCGTTGATATATCAGCAACAACAATAGATGCAGATGAATCAAATGTT
CAAAATATTCCAGATGCAGAGACCAAAGGATTTCATTTTGATACAGAAGA
TGGGGACAAAGTTCTTCCAGGTTTTCTTGATTCTATAAGTGGAATTCAAC
GAGGTGAAACAAAGTCCTTTCGACTCGCATTCCCTGAATCCTGGAGACAA
GAACATCTTCGTGGTGTTCAAGCTCAATTTACTGTTGAATGCAGAGAACT
GTTTTATAGAGATTTGCCGAAATTGGATGACTCCCTTGCTGGAAAGCTTC
TTCCTGGATGCACTACCATAGAGCAGGTCAAGGAAACATTATTGCAGAAG
TGTCGAGAAGTGGAGCAAACTGCAAAAGACCAGGCGACTGATAATGCAAT
TCTAGACCAGCTTTACAAGATGGTGGAAATTGATATTCCTCAATCCTTGT
TTGAGGAACAAGGAAGGCAGCTTTATGGGGCTCAACTTTTGCAGATGCAG
GCAGGTATGAAATTGAACGAACAGCAGTTGGCTGCTCTATCAAGCCCAAA
AGCAGTAAAAGAGTTTCTGGAAAACCAGACGGAGAACATAACCAATGTGA
TAAAACAGAATCTAGCCGTCGGAGATATCTTTAAACGTGAAAATTTGCAG
TTTTCGACTGAAGACTTAGTCAAAGAAGTTGAAAACTCCATTGCTGAATT
AAAACAACAGAAACCAGAATATGATGAGGGATCGCGTAGAGAACAGGTGA
TAGACATACTCGAAGGGAGCTAAAGTCTCGAATGGGTGAGAGACATGCAG
AAAATCAGTNCANACCCAGATGAGAACATACCCCATATATGAAAAGGAGC
TAGGAGTTGCAGGAGCCGGATTAAAATTGCATTGCAGAGCATTGGTGCTC
TGCAAATTTTGATTGAAAAA
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