EY659440

Overview
NameEY659440
Unique NameEY659440
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length920
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_VIBPA (Trigger factor OS=Vibrio parahaemolyticus GN=tig PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.398e-12
Identity = 57/205 (27.80%), Postives = 99/205 (48.29%), Query Frame = 3
Query:   75 KGFHFDTEDG-DKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKC-REVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVE 683
            K  +F  E G  +++PGF D I+G   G      + FPE +  E+L+G  A+F ++  ++  R+LP+L+D    K       ++ +K  + +   RE++Q  K +  + AI + L K  EID+P +L E++        +L+ QA  +      AA   P   +E  E Q +    V    L +G++ K E L+   E +   +E
Sbjct:  181 KAENFPLEMGAGRMIPGFEDGIAGKTAGMEFDIDVTFPEDYHAENLKGKAAKFAIKVNKVEARELPELNDEFVAKFGVAEGGVDALKAEVRKNMERELKQAVKTRIKEQAI-EGLVKENEIDVPAALIEQE------IHVLRQQAAQRFGGNPEAAAQLP---RELFEEQAKRRVVV---GLLLGEVIKSEELKADDEKVKALIE 372          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_IDILO (Trigger factor OS=Idiomarina loihiensis GN=tig PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.398e-12
Identity = 59/219 (26.94%), Postives = 103/219 (47.03%), Query Frame = 3
Query:   75 KGFHFDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTE--DLVKEVENSIAELKQQKPEY 722
            K   F  E G+ +++PGF D I GI+ GE K+  + FPE +  E+L+G +AQF V  +++  RDLP+L+D            +E +KE + +      + A        +L  + +  ++++P+S+ +++  QL   Q  Q   G   N +Q+     P    E  E Q +     +K  L +G++ +   L+   E  D +     S  E  Q+  EY
Sbjct:  181 KADDFALELGEGRMIPGFEDQIKGIKAGEEKTIEVTFPEDYHAENLKGKEAQFVVTAKKVEARDLPELNDEFVALFGVKEGGVEALKEEVRKNMERELKNAVKAKVKEQVLKGIVENNDVELPKSMIDQEIDQL-RKQAAQRFGG---NVEQM-----PDLPAELFEEQAK---ERVKVGLLLGEVIRGNELKADDEKVDEIIATAASAYEDPQEVVEY 387          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_CLOB6 (Trigger factor OS=Clostridium botulinum (strain 657 / Type Ba4) GN=tig PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.398e-12
Identity = 56/217 (25.81%), Postives = 114/217 (52.53%), Query Frame = 3
Query:   69 ETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKC-REVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQ-AGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQK 713
            E K +  +   G   +  F D + G+++ E+K   ++FPE + +E L G  A F V  +++  ++LP LDD  A K +    T+E++K  +  +  +E+ + AK +  + A+++ +    EI+IP+ + E++   +     ++++  G+ L        SS + VKE++    E     +K +L + +I K E+++ +TE+ +KE    +A+   QK
Sbjct:  183 EAKDYEIEIGSGT-FIGDFEDQLVGLKKDESKEVNVSFPEEYGREDLNGKPATFEVTIKDIKVKELPALDDEFA-KEVSEFDTLEELKSDIKDRMKKELSEKAKAE-YEEAVVEAVAANAEIEIPKVMIEKEIENMVRDLEMRLKYQGLDLKSYYEFTNSSEEKVKEYMRETAE---KRVKTDLIMQEIAKVEDIK-ATEEELKEKAMEVAKQYGQK 392          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_BACWK (Trigger factor OS=Bacillus weihenstephanensis (strain KBAB4) GN=tig PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.398e-12
Identity = 56/235 (23.83%), Postives = 107/235 (45.53%), Query Frame = 3
Query:    3 IVDISATTIDADESNV--QNIPDAET----KGFHFDTEDGDKV-LPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFE-EQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVE 683
            +V    T  D D + +  +   D E     KG ++    G    +PGF + + G++ G++K   ++FPE +    L G  A F V   E+  ++LP+L+D  A        T++++K  L     E ++   +    + +++      EIDIP+++ + E  R +   +    Q GM L   +L    +     +  E   E+    ++ NL +  I + EN++ + E++  EVE
Sbjct:  153 VVKEDGTAADGDTAVIDFEGFVDGEAFEGGKGENYSLAIGSGTFIPGFEEQVIGLKSGDSKEVEVSFPEEYHAAELAGKPATFKVTIHEIKTKELPELNDEFAKDADEEVATLDELKTKLRTNLEEGKKHEAEHKVRDEVVELAAANAEIDIPEAMIDTELDRMVREFEQRLSQQGMNL---ELYYQFTGTDADKLKEQMKEDAQKRVRINLVLEAIIEAENIEVTEEEVTAEVE 384          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_BACCR (Trigger factor OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=tig PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.398e-12
Identity = 47/191 (24.61%), Postives = 92/191 (48.17%), Query Frame = 3
Query:  114 LPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFE-EQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVE 683
            +PGF + + G++ GE+K   ++FPE +    L G  A F V   E+  ++LP+L+D  A +      T++++K  L     E ++   +    + +++      EI+IP+++   E  R +   +    Q GM L   +L    +     +  E   E+    ++ NL +  I + EN++ + E++  EVE
Sbjct:  197 IPGFEEQVIGLKSGESKDVEVSFPEEYHAAELAGKPATFKVTIHEIKTKELPELNDEFAKEADEAVATLDELKAKLRTNLEEGKKHEAEHKVRDEVVELAAANAEIEIPEAMINTELDRMVREFEQRLSQQGMNL---ELYYQFTGTDADKLKEQMKEDAQKRVRINLVLEAIIEAENIEVTEEEVTAEVE 384          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_BACC4 (Trigger factor OS=Bacillus cereus (strain B4264) GN=tig PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.398e-12
Identity = 47/191 (24.61%), Postives = 92/191 (48.17%), Query Frame = 3
Query:  114 LPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFE-EQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVE 683
            +PGF + + G++ GE+K   ++FPE +    L G  A F V   E+  ++LP+L+D  A +      T++++K  L     E ++   +    + +++      EI+IP+++   E  R +   +    Q GM L   +L    +     +  E   E+    ++ NL +  I + EN++ + E++  EVE
Sbjct:  197 IPGFEEQVIGLKSGESKDVEVSFPEEYHAAELAGKPATFKVTIHEIKTKELPELNDEFAKEADEAVATLDELKAKLRTNLEEGKKHEAEHKVRDEVVELAAANAEIEIPEAMINTELDRMVREFEQRLSQQGMNL---ELYYQFTGTDADKLKEQMKEDAQKRVRINLVLEAIIEAENIEVTEEEVTAEVE 384          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_BACC2 (Trigger factor OS=Bacillus cereus (strain G9842) GN=tig PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.398e-12
Identity = 47/191 (24.61%), Postives = 92/191 (48.17%), Query Frame = 3
Query:  114 LPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFE-EQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVE 683
            +PGF + + G++ GE+K   ++FPE +    L G  A F V   E+  ++LP+L+D  A +      T++++K  L     E ++   +    + +++      EI+IP+++   E  R +   +    Q GM L   +L    +     +  E   E+    ++ NL +  I + EN++ + E++  EVE
Sbjct:  197 IPGFEEQVIGLKSGESKDVEVSFPEEYHAAELAGKPATFKVTIHEIKTKELPELNDEFAKEADEAVATLDELKAKLRTNLEEGKKHEAEHKVRDEVVELAAANAEIEIPEAMINTELDRMVREFEQRLSQQGMNL---ELYYQFTGTDADKLKEQMKEDAQKRVRINLVLEAIIEAENIEVTEEEVTAEVE 384          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_POLNS (Trigger factor OS=Polynucleobacter necessarius (strain STIR1) GN=tig PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.825e-12
Identity = 66/233 (28.33%), Postives = 118/233 (50.64%), Query Frame = 3
Query:   48 VQNIPDAETKGFHFDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLA---GKLLPGCTTIE-QVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLF-EEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPEYDE 728
            +  +  A  K  +F+   G+ ++LP F  +  G++ GE+KSF L+FP  +  + + G  A+FT+  + + +  LP +DD+ A   G    G T +  +VKE L    REV++        + ++D+L  + E+D+P+SL   EQ R + GA+   MQ G+        A  +P   + F E  T+     ++  L + ++ K +NL  +T D +K      AE+ +Q   Y++
Sbjct:  183 IDGVEFAGGKAENFECVLGEGRMLPEFEAATLGLKVGESKSFPLSFPADYHGKDVAGKTAEFTITVKSVNWAHLPVVDDAFALSLGVTEGGVTKMRAEVKENL---DREVKRRV-TTLLKSEVMDKLNSLCELDVPKSLVASEQERLVEGARQDLMQRGVP------NAKDAPIPAEIFAEQATKR----VRLGLILSELVKNQNL-IATADQIK------AEIDEQATTYED 394          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_LACRJ (Trigger factor OS=Lactobacillus reuteri (strain JCM 1112) GN=tig PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.825e-12
Identity = 56/235 (23.83%), Postives = 112/235 (47.66%), Query Frame = 3
Query:  114 LPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEI-DIPQSLFEEQGRQLYGAQLLQMQAGMK---LNEQQLAALSSPKAVKEFLENQTEN-ITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPEYDEGSRREQVIDILEGS*SLEWVRDMQK 803
            +PGF D + G    E     + FPE +  ++L G  A F V+  E+  + LP+LDD  A  +     T+ ++KE   ++ +E +      A ++A +++     EI DIPQ++ ++   +    Q+ Q  AGM+   ++ Q    ++  K  +E L+ Q  N     +K NL +  I    NL  + E++ KE+ +   +   ++    +   ++ ++  ++   +++ V D  K
Sbjct:  198 IPGFEDQLIGHNADEDVDVNVTFPEDYHAKNLAGKDALFKVKIHEIKEKQLPELDDDFAKDVDEDVDTLAELKEKTKKQLQEEKDNQAKAAIEDAAINKAVANAEIQDIPQAMLDDDTNR----QMQQYLAGMQQQGISPQMYFQITGTK--EEDLKKQFANDAAQRVKTNLVLEAIVDDANLDATDEEIAKEISDLAKQYGMEEDAVKKALSKDMLMHDIKIRKAVDLVADSAK 426          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_LACRD (Trigger factor OS=Lactobacillus reuteri (strain DSM 20016) GN=tig PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.825e-12
Identity = 56/235 (23.83%), Postives = 112/235 (47.66%), Query Frame = 3
Query:  114 LPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEI-DIPQSLFEEQGRQLYGAQLLQMQAGMK---LNEQQLAALSSPKAVKEFLENQTEN-ITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPEYDEGSRREQVIDILEGS*SLEWVRDMQK 803
            +PGF D + G    E     + FPE +  ++L G  A F V+  E+  + LP+LDD  A  +     T+ ++KE   ++ +E +      A ++A +++     EI DIPQ++ ++   +    Q+ Q  AGM+   ++ Q    ++  K  +E L+ Q  N     +K NL +  I    NL  + E++ KE+ +   +   ++    +   ++ ++  ++   +++ V D  K
Sbjct:  198 IPGFEDQLIGHNADEDVDVNVTFPEDYHAKNLAGKDALFKVKIHEIKEKQLPELDDDFAKDVDEDVDTLAELKEKTKKQLQEEKDNQAKAAIEDAAINKAVANAEIQDIPQAMLDDDTNR----QMQQYLAGMQQQGISPQMYFQITGTK--EEDLKKQFANDAAQRVKTNLVLEAIVDDANLDATDEEIAKEISDLAKQYGMEEDAVKKALSKDMLMHDIKIRKAVDLVADSAK 426          
The following BLAST results are available for this feature:
BLAST of EY659440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
TIG_VIBPA1.398e-1227.80Trigger factor OS=Vibrio parahaemolyticus GN=tig P... [more]
TIG_IDILO1.398e-1226.94Trigger factor OS=Idiomarina loihiensis GN=tig PE=... [more]
TIG_CLOB61.398e-1225.81Trigger factor OS=Clostridium botulinum (strain 65... [more]
TIG_BACWK1.398e-1223.83Trigger factor OS=Bacillus weihenstephanensis (str... [more]
TIG_BACCR1.398e-1224.61Trigger factor OS=Bacillus cereus (strain ATCC 145... [more]
TIG_BACC41.398e-1224.61Trigger factor OS=Bacillus cereus (strain B4264) G... [more]
TIG_BACC21.398e-1224.61Trigger factor OS=Bacillus cereus (strain G9842) G... [more]
TIG_POLNS1.825e-1228.33Trigger factor OS=Polynucleobacter necessarius (st... [more]
TIG_LACRJ1.825e-1223.83Trigger factor OS=Lactobacillus reuteri (strain JC... [more]
TIG_LACRD1.825e-1223.83Trigger factor OS=Lactobacillus reuteri (strain DS... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-B07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659440 ID=EY659440; Name=EY659440; organism=Citrus sinensis; type=EST; length=920bp
CAATCGTTGATATATCAGCAACAACAATAGATGCAGATGAATCAAATGTT
CAAAATATTCCAGATGCAGAGACCAAAGGATTTCATTTTGATACAGAAGA
TGGGGACAAAGTTCTTCCAGGTTTTCTTGATTCTATAAGTGGAATTCAAC
GAGGTGAAACAAAGTCCTTTCGACTCGCATTCCCTGAATCCTGGAGACAA
GAACATCTTCGTGGTGTTCAAGCTCAATTTACTGTTGAATGCAGAGAACT
GTTTTATAGAGATTTGCCGAAATTGGATGACTCCCTTGCTGGAAAGCTTC
TTCCTGGATGCACTACCATAGAGCAGGTCAAGGAAACATTATTGCAGAAG
TGTCGAGAAGTGGAGCAAACTGCAAAAGACCAGGCGACTGATAATGCAAT
TCTAGACCAGCTTTACAAGATGGTGGAAATTGATATTCCTCAATCCTTGT
TTGAGGAACAAGGAAGGCAGCTTTATGGGGCTCAACTTTTGCAGATGCAG
GCAGGTATGAAATTGAACGAACAGCAGTTGGCTGCTCTATCAAGCCCAAA
AGCAGTAAAAGAGTTTCTGGAAAACCAGACGGAGAACATAACCAATGTGA
TAAAACAGAATCTAGCCGTCGGAGATATCTTTAAACGTGAAAATTTGCAG
TTTTCGACTGAAGACTTAGTCAAAGAAGTTGAAAACTCCATTGCTGAATT
AAAACAACAGAAACCAGAATATGATGAGGGATCGCGTAGAGAACAGGTGA
TAGACATACTCGAAGGGAGCTAAAGTCTCGAATGGGTGAGAGACATGCAG
AAAATCAGTNCANACCCAGATGAGAACATACCCCATATATGAAAAGGAGC
TAGGAGTTGCAGGAGCCGGATTAAAATTGCATTGCAGAGCATTGGTGCTC
TGCAAATTTTGATTGAAAAA
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