EY659440

Overview
NameEY659440
Unique NameEY659440
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length920
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_STRA1 (Trigger factor OS=Streptococcus agalactiae serotype Ia GN=tig PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.183e-11
Identity = 50/216 (23.15%), Postives = 100/216 (46.30%), Query Frame = 3
Query:   75 KGFHFDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEI-DIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQ--QLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQ 710
            KG +F  E G  + +PGF + + G + G+T    + FPE ++ E L G  A+F     E+  +++P LDD LA  +     T++++K    ++    ++ A D A + A ++      EI ++P+ +  ++  +     +  MQ      E   QL   +     K++  +  +     +K NL +  I   E  + + E++ KE+ +  +E   +
Sbjct:  183 KGDNFSLELGSGQFIPGFEEQLVGSKAGQTVDVNVTFPEDYQAEDLAGKDAKFVTTIHEVKTKEVPALDDELAKDIDEEVETLDELKAKYRKELESAKEIAFDDAVEGAAIELAVANAEIVELPEEMVHDEVHRAMNEFMGNMQRQGISPEMYFQLTGTTEEDLHKQYQADADKR----VKTNLVIEAIAAAEGFEATDEEIEKEITDLASEYNME 394          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_SPHAL (Trigger factor OS=Sphingopyxis alaskensis GN=tig PE=3 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.545e-11
Identity = 49/205 (23.90%), Postives = 97/205 (47.32%), Query Frame = 3
Query:  108 KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQ-KPE 719
            +++PGF D + G++ G+ K+ ++ FPE +  E L+G  A+F V  +E+      K+DD  A  L  G  +++++KE +  +  +             +LDQL    + ++P ++ E +  Q++  Q L+ +A  +           P+A K  LEN  E    +  + + +G +          +   +E++  I +  QQ +PE
Sbjct:  196 QLIPGFEDQLVGVKAGDEKTLKVTFPEDYPVETLKGKLAEFAVTVKEVKVPAATKIDDEFAKSL--GLESLDKLKELMKDQVEQELNGLTRTHMKRKLLDQLAAAHDFEVPPTMVEAEFNQIW--QQLEHEASHE---------EDPEAAKAELENDREEYRAIAVRRVRLGLLLSEIGQAHGVQVSQQEMQRLIMQAAQQYRPE 387          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_RALEH (Trigger factor OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=tig PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.545e-11
Identity = 50/207 (24.15%), Postives = 102/207 (49.28%), Query Frame = 3
Query:   69 ETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKC-REVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVEN 686
            + + F F   +G ++LP F  +  G++ GE+K+F LAFPE +  + + G  A+FTV  +++ +  LP+++D+ A  L     ++E+++  + +   REV++       D  +++ L K  E+++P++L E+   +L         A   L ++ +          E    Q E     +K  L + +I K   L+   + +  E+E+
Sbjct:  193 KAEDFPFVLGEG-RMLPEFEQAALGLKVGESKTFPLAFPEDYHGKEVAGKTAEFTVTLKKIEWAHLPEVNDAFAKSLGIADGSVEKMRADIRENLEREVKRRTHSMLKDQ-VMEALLKASELEVPKALIEQDQERLV------EMARRDLEQRGMPNAKDMPIPAEMFAQQAE---RRVKLGLILAEIVKANGLEAKADQIKAEIED 388          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_PELTS (Trigger factor OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=tig PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.545e-11
Identity = 57/225 (25.33%), Postives = 113/225 (50.22%), Query Frame = 3
Query:   57 IPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMV---EIDIPQSLFEEQGRQLYGAQLLQMQA-GMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPE 719
            I   E + +  +   G  V  GF + + G+  GET+   + FPE+++ E L G +A+FTV  +E+  +++  LDD  A K +    T+E+++  L  K   ++Q A+++A     +D + K V   E++IP+ +   Q   + G    ++ + G+ L +      S+ + ++  +  + E     +K  L +  I + E ++ S E++ +E++   A   QQ PE
Sbjct:  179 IKGGEGRDYSLEIGSGSFV-QGFEEQLVGMAAGETREIDVTFPENYKAEELAGKEAKFTVTVKEIKRKEIAPLDDDFA-KDVSEFDTLEELRNDLSNK---LKQAAENRAEYQVKMDAVTKAVDNAEVEIPEVMITNQLADMIGTLASRLSSQGLSLEDYLKYTGSTLEDMRASMMPEAE---RNVKTALVLEAIARAEGIKASDEEVDEEIKKMAAHY-QQDPE 394          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_PELCD (Trigger factor OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=tig PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.545e-11
Identity = 63/240 (26.25%), Postives = 106/240 (44.17%), Query Frame = 3
Query:  114 LPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQA-GMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPE-------YDEGSR-------REQVIDILEGS*SLEWV 788
            +PGF D + G++ G+ K   +AFPE +  E L G  A F V   ++  R LP LD+  A +   G  ++E +K  + +     E+   ++     + D L +  E ++P+ + + Q   +      +MQA GM+L +  + A S  +  +E    Q       +K +L +  I  +ENL+   ED +K+    I E      E        DE  R        E+V+  L G   +E V
Sbjct:  197 IPGFEDQVVGMECGQDKDIEVAFPEDYGNEELAGKPAVFKVRLNQIKERVLPALDEEFAKE--AGLESVEDLKIKIRESIEGQERDRIEKDFRERMTDALIEANEFEVPEGMIDSQIDYMLKNLQNRMQAQGMRLEDMGINAESFRQIYREVAAKQ-------VKASLILEAIALQENLKVE-EDEIKDKLEEIVETSGAPKEAVMNYYSNDESRRGLVSQMAEEKVVAFLTGKAKIEMV 426          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_RALSO (Trigger factor OS=Ralstonia solanacearum GN=tig PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.018e-11
Identity = 51/206 (24.76%), Postives = 102/206 (49.51%), Query Frame = 3
Query:   69 ETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKC-REVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVE 683
            + +GF F   +G ++LP F  +  G+++GE+K F LAFP  +  + + G  A+FTV  +++ +  LP+++ + A  L     ++++++  + +   REV++       D  ++D L K+ E+D+P+SL E+   +L         A   L  + +  + +     E    Q E     +K  L + ++ K   L+   E +  E+E
Sbjct:  192 KAEGFGFVLGEG-RMLPEFEQATLGLKQGESKVFPLAFPADYHGKDVAGKTAEFTVTLKQVEWAHLPEINGAFAQSLGIADGSLDKMRADIRENLEREVKRRTHALLKDQ-VMDALLKVAELDVPKSLIEQDQERLV------EMARRDLEARGMPNVKNMPIPAEMFAQQAE---RRVKLGLVLAEVVKVNALEAKPEQIKAEIE 386          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_LACS1 (Trigger factor OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=tig PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.018e-11
Identity = 61/237 (25.74%), Postives = 112/237 (47.26%), Query Frame = 3
Query:   75 KGFHFDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCRE---------VEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPEYDEGSRREQVID 755
            KG +   E G  + +PGF D + G + GE  +  + FPE ++ + L G +A F  +  E+  ++LP+LDD  A  +     T+E++K  +  + ++         +++ A D A +NA + ++  ++   I   +  +    L G Q   + A M     QL   S+    K+F E   +     +K NL +  I K E ++ S +++  E++ S+AE  Q     DE + R  + D
Sbjct:  184 KGENHSLELGSGQFIPGFEDQLVGHKAGEEVAVTVTFPEDYQAKDLAGKEAVFDTKIHEVKTKELPELDDEFAKDVDEDVATLEELKAKIKDRLKDQKVAEAKAAIQEEALDIAVENATIGEIPAVM---IEDDVHRQMDNFLAGMQNQGISADM---YYQLTGTSADDLHKQFEEGAEKR----VKTNLVLEAIVKAEKIEPSEDEINAEIK-SLAEQYQM----DEAAVRSALSD 405          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_LACAC (Trigger factor OS=Lactobacillus acidophilus GN=tig PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.018e-11
Identity = 49/197 (24.87%), Postives = 97/197 (49.24%), Query Frame = 3
Query:  114 LPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEID-IPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQ-TENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAE 698
            +PGF D + G + G+     + FP+ +  + L G +A F  +  E+  + LP+LDD  A  +     T++++KE + +  ++ ++   + A   A ++   K   ID IP ++ +E         L  MQ    ++ Q    L++    ++ L +Q  +N    +K NL +  I   E+L+ + E++ KE+++  AE
Sbjct:  196 IPGFEDQLVGHEAGDDVDVVVTFPKDYGAKDLAGKEAHFATKIHEVKSKQLPELDDEFAKDVDDSVDTLDELKEKIKKDLKDQKEQVANDAIQEAAIEGAVKNATIDEIPDAMIQEDVDTQLNQYLGNMQR-QGIDPQTYYKLTN--TTEDQLRSQFAKNAAERVKTNLVLEAIVAAEDLKATKEEIDKEIKDLAAE 389          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_GEOMG (Trigger factor OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=tig PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.018e-11
Identity = 51/201 (25.37%), Postives = 100/201 (49.75%), Query Frame = 3
Query:  108 KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQA-TDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQ 707
            + +PGF D + G++ GE ++  + FPE +  + L G  A F V  +E   ++LP+LDD  A +      T+EQ+K T L +  + ++TA+ +A   + I+  L    EI++P +L E Q       Q++      +L +Q+L+        + F  +  ++  + +K +L +  + K+E +  +  D+  ++     E  Q
Sbjct:  195 RFIPGFEDQLVGVKAGEQRTVEVTFPEEYGNKDLAGKAASFAVTVKEAKVKELPELDDEFAMQ-FGEFETLEQLK-TKLAELHKDQETARIKADVQDRIVKALIGNNEIEVPSTLVERQ------LQMMLSNMKNRLAQQRLSLEMMGMDDESFKTHYRDSAESQVKGSLLLEAVAKKEGITVNDPDVEAKLRAMAEEAGQ 387          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_BURP8 (Trigger factor OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=tig PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.018e-11
Identity = 52/227 (22.91%), Postives = 97/227 (42.73%), Query Frame = 3
Query:   30 DADESNVQNIPDAETKGFHFDTEDG-------DKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFL--ENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVE 683
            D D   V  +   + + F   T D         ++LP F  +  G++ GE+K F LAFPE +  + + G  AQF +  +++ +  LP++D   A  L      + +++  +        +        N ++D L K+ E+D+P++L E+  ++L           +++  Q L     P A    +  E   E     +K  L + ++ K   LQ   E +  EV+
Sbjct:  171 DGDRVTVDFVGKIDGEAFQGGTADDFAFVLGEGRMLPEFEKAALGLKVGESKEFDLAFPEDYHGKEVAGKTAQFAITMKKIEWPHLPEIDAEFAKSLGIEDGDLTKMRNEIRDNLEREAKRRTQAVVKNQVMDALLKISELDVPKALIEQDQQRL-----------VEMARQDLVQRGVPNAKDAPIPAEMFAEQAERRVKLGLVLAELVKANELQAKPEQIRAEVD 386          
The following BLAST results are available for this feature:
BLAST of EY659440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
TIG_STRA11.183e-1123.15Trigger factor OS=Streptococcus agalactiae serotyp... [more]
TIG_SPHAL1.545e-1123.90Trigger factor OS=Sphingopyxis alaskensis GN=tig P... [more]
TIG_RALEH1.545e-1124.15Trigger factor OS=Ralstonia eutropha (strain ATCC ... [more]
TIG_PELTS1.545e-1125.33Trigger factor OS=Pelotomaculum thermopropionicum ... [more]
TIG_PELCD1.545e-1126.25Trigger factor OS=Pelobacter carbinolicus (strain ... [more]
TIG_RALSO2.018e-1124.76Trigger factor OS=Ralstonia solanacearum GN=tig PE... [more]
TIG_LACS12.018e-1125.74Trigger factor OS=Lactobacillus salivarius subsp. ... [more]
TIG_LACAC2.018e-1124.87Trigger factor OS=Lactobacillus acidophilus GN=tig... [more]
TIG_GEOMG2.018e-1125.37Trigger factor OS=Geobacter metallireducens (strai... [more]
TIG_BURP82.018e-1122.91Trigger factor OS=Burkholderia phymatum (strain DS... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-B07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659440 ID=EY659440; Name=EY659440; organism=Citrus sinensis; type=EST; length=920bp
CAATCGTTGATATATCAGCAACAACAATAGATGCAGATGAATCAAATGTT
CAAAATATTCCAGATGCAGAGACCAAAGGATTTCATTTTGATACAGAAGA
TGGGGACAAAGTTCTTCCAGGTTTTCTTGATTCTATAAGTGGAATTCAAC
GAGGTGAAACAAAGTCCTTTCGACTCGCATTCCCTGAATCCTGGAGACAA
GAACATCTTCGTGGTGTTCAAGCTCAATTTACTGTTGAATGCAGAGAACT
GTTTTATAGAGATTTGCCGAAATTGGATGACTCCCTTGCTGGAAAGCTTC
TTCCTGGATGCACTACCATAGAGCAGGTCAAGGAAACATTATTGCAGAAG
TGTCGAGAAGTGGAGCAAACTGCAAAAGACCAGGCGACTGATAATGCAAT
TCTAGACCAGCTTTACAAGATGGTGGAAATTGATATTCCTCAATCCTTGT
TTGAGGAACAAGGAAGGCAGCTTTATGGGGCTCAACTTTTGCAGATGCAG
GCAGGTATGAAATTGAACGAACAGCAGTTGGCTGCTCTATCAAGCCCAAA
AGCAGTAAAAGAGTTTCTGGAAAACCAGACGGAGAACATAACCAATGTGA
TAAAACAGAATCTAGCCGTCGGAGATATCTTTAAACGTGAAAATTTGCAG
TTTTCGACTGAAGACTTAGTCAAAGAAGTTGAAAACTCCATTGCTGAATT
AAAACAACAGAAACCAGAATATGATGAGGGATCGCGTAGAGAACAGGTGA
TAGACATACTCGAAGGGAGCTAAAGTCTCGAATGGGTGAGAGACATGCAG
AAAATCAGTNCANACCCAGATGAGAACATACCCCATATATGAAAAGGAGC
TAGGAGTTGCAGGAGCCGGATTAAAATTGCATTGCAGAGCATTGGTGCTC
TGCAAATTTTGATTGAAAAA
back to top