EY659440

Overview
NameEY659440
Unique NameEY659440
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length920
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_LACGA (Trigger factor OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) GN=tig PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.442e-11
Identity = 46/192 (23.96%), Postives = 92/192 (47.92%), Query Frame = 3
Query:  114 LPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCRE-VEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVEN 686
            +PGF D + G + G+     + FPE +  + L G +A F  +  E+  ++LPKLDD  A  +     +++++K+ + +  ++  E+ AKD   D AI   +      ++PQ++ +E  +      L  MQ    ++ Q    L+      +  E   +     +K NL +  I  +E L  S +++ +E+++
Sbjct:  196 IPGFEDQLIGHKAGDDVDVVVTFPEDYGAKDLAGKEAHFATKIHEVKSKELPKLDDEFAKDVDDSVESLDELKDKIKKDLKKHKEEDAKDAIQDAAIKGAVENATIDEVPQAMIDEDVQNQLNQYLGNMQR-QGIDPQTYFKLTGTTEA-QLREQLAKGAAERVKTNLVLEAIVAKEKLDASADEIKQEIKD 385          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_BORA1 (Trigger factor OS=Bordetella avium (strain 197N) GN=tig PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.442e-11
Identity = 58/248 (23.39%), Postives = 113/248 (45.56%), Query Frame = 3
Query:  108 KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEE--QGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQ--QKPEY--DEGSRREQVIDILEGS*SLEWVRDMQKISXXPDENIP 833
            ++LP F ++  G++ G+TK F L+FPE ++ + + G  A+FT+  +E+    LP +D   A  L      +E++K  +        +      T  +++D L +  + D+P+SL +   QGR          QA  +L ++ +    S     E    ++E     ++  L V ++ K++ LQ   E +   +E      +Q  Q   Y   +  RR ++  I+     + +V +  K++   DE +P
Sbjct:  195 RMLPEFEEAARGLKAGDTKVFPLSFPEDYQGKEVAGKTAEFTITVKEVAEAVLPVVDAEFAKSLGQADADVEKLKADIRGNIEREVKVRSQGRTKTSVMDALVEAAKFDVPKSLVDNDVQGR--------IAQAREELKQRGVPNADSMPMPAEVFAVESE---RRVRLGLLVSELVKQQQLQAKPEQVRARIEEFAQNYEQPAQVVSYYLSDRQRRAEIEAIVLEDNVVAYVLEKAKVT---DEKVP 428          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_SODGM (Trigger factor OS=Sodalis glossinidius (strain morsitans) GN=tig PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.496e-11
Identity = 43/216 (19.91%), Postives = 100/216 (46.30%), Query Frame = 3
Query:  108 KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPEYDEGSRREQVID 755
            +++PGF + + G + GE+    + FPE +  E+L+G  A+F VE +++  R+LP+LD++   +      ++E ++  + +      + A        ++D L    +I +P +L + +        +L+ QA  +    +  AL  P+ + E      E     +K  L +G++ ++  L+     +   +E   +  +  K   +   + ++++D
Sbjct:  193 RMIPGFEEGVIGHKAGESFDISVTFPEDYHAENLKGKAAKFAVELKKVEQRELPELDEAFIKRFGVADVSLEGLRAEVRKNMERELKNAVRNRVKTQVIDGLLNANDIHVPAALVDGE------IDVLKRQAAQRFGGNEKQALELPRELFE------EQAKRRVKVGLLLGEVIRKHELKADEARVSALIEEMASAYEDPKEVIEFYGKNKELMD 396          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_LYSSC (Trigger factor OS=Lysinibacillus sphaericus (strain C3-41) GN=tig PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.496e-11
Identity = 55/239 (23.01%), Postives = 111/239 (46.44%), Query Frame = 3
Query:   75 KGFHFDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYG--AQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPEYDEGSRREQVIDILEGS*SLE 782
            KG  +  E G    +PGF + ++G++ GE+K   + FPE +    L G +A F V  +E+  + LP+L+D  A +L     ++E ++  + ++    +    D A  + ++++  +  E ++P  +   +  ++     Q LQ Q GM L+   L    S ++ ++      E   + ++ +L +  I + E ++ +  D+  E+E   A+    K         EQ+   L G+  LE
Sbjct:  184 KGEDYPLEIGSGSFIPGFEEQLTGVKAGESKDVVVTFPEEYHAAELAGKEATFKVTVKEVKTKVLPELNDEFAKELDSEVESVEALRAKIKEQTAAQKVAESDAALRDELVEKASENAEFEVPAGMINSETDRMLQEFGQRLQTQ-GMNLD---LYYQFSGQSEEDLRGQMKEEAESRVRVSLTLEAIAEAEKIEATEADIEAELEKMAAQFNMTK---------EQITGALGGTAVLE 409          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_BURXL (Trigger factor OS=Burkholderia xenovorans (strain LB400) GN=tig PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.496e-11
Identity = 45/192 (23.44%), Postives = 86/192 (44.79%), Query Frame = 3
Query:  108 KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVE 683
            ++LP F  + +G++ GE+K F LAFPE +  + + G  AQFT+  +++ +  LP++D   A  L      + +++  +        +        N ++D L K+ E+D+P +L E+   +L         A   L ++ +             + Q E     +K  L + ++ K   LQ   E +  EV+
Sbjct:  204 RMLPEFEKAATGLKVGESKEFDLAFPEDYHGKEVAGKTAQFTITMKKIEWPHLPEIDAEFAKSLGIEDGDLTKMRAEIKDNLEREAKRRTQAIVKNQVMDALLKISELDVPNALIEQDQERLVA------MARQDLEQRGVPNAKDAPIPAAMFKEQAE---RRVKLGLVLAELVKANELQAKPEQIRAEVD 386          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_ALKOO (Trigger factor OS=Alkaliphilus oremlandii (strain OhILAs) GN=tig PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.496e-11
Identity = 50/218 (22.94%), Postives = 100/218 (45.87%), Query Frame = 3
Query:  114 LPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPEYDEGSRREQVIDILEG 767
            +PGF + + G   GE    ++ FPE +  E L G  A F V+  E+  +++P +DD  A K +    T+E++   + +   E  +    Q   N +++ +   VE++IP ++   Q   +      ++Q    LN +    L+  K  ++  E    +    +K  L +  I  +EN+  + E+L +++E    +  Q+  +     R++ +  I EG
Sbjct:  197 IPGFEEQLVGKNIGEEVEVQVTFPEEYHAEELAGKAAIFEVKIHEIKEKEVPVIDDEFA-KDVSEFDTLEELTNDIKKNLEEDAKNRAIQEQRNDVIEAIANKVELEIPSAVVNRQIDNMLADFDYRLQF-QGLNLEYYLQLTGTKE-EDLREQMRPDAVKTVKNELILEKIGAKENIVATDEELEEQLEKMAKQYNQEIEKLKTNLRQQDLNAIKEG 411          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_SACD2 (Trigger factor OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=tig PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.872e-11
Identity = 53/208 (25.48%), Postives = 95/208 (45.67%), Query Frame = 3
Query:  105 DKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFE---EQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPE 719
            + ++PGF   I G++ GET++ ++ FP+ +++E LRG +A+F V  +++  + LPKLDD    K        E+ +  + +     +Q A        +++ L     +DIP+SL     +  R   G Q++Q Q G +       ++      KE  E +       +   L V +I K E +    E LVK +   +A   +   E
Sbjct:  192 NSMIPGFEKGIIGMKAGETETIKVTFPDDYQEESLRGAEAEFEVTVQKVEGQKLPKLDDEFFAKFGVTEGGEEKFRADVRENMEREKQKALKGKLKEQVMNGLVAANTVDIPKSLVSGEIDALRNQMGNQMMQ-QYGSQAEGIDFKSILPDDMFKEQAERR-------VALGLIVSEIVKNEKISVDKE-LVKSLIEDVASTYEHPEE 390          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_NITSB (Trigger factor OS=Nitratiruptor sp. (strain SB155-2) GN=tig PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.872e-11
Identity = 52/230 (22.61%), Postives = 111/230 (48.26%), Query Frame = 3
Query:    3 IVDISATTIDADESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLL-PGCTTIEQVKETLLQKCREVEQTAK--DQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTE-NITNVIKQNLAVGDIFKRENLQFSTEDLVKEV 680
            ++D   T  D  E     I     + F      G + +PGF + + G+++GETK+  + FPE +  + L G +A F V    +  ++   +DD LA K+L     T++++KE + ++ +  E+ +K  ++     +++ L +  E D+P+++ +++       QL    A  +++E+++  L   K   E L  + E      +K    V  + K E +  + +++V+ +
Sbjct:  169 VIDFKGTLEDGSE-----IEGGSAQNFELRLGSG-QFIPGFEEQVEGMKKGETKTIEVTFPEDYPNKELAGKKANFEVTLHTIKEKEKINIDDELAKKMLQKEDATLDELKEEVRKQLKS-EKLSKLYNEELKPKLVEALVEKFEFDLPKNIVDQE----IDVQLNNKAA--QMSEEEIKELRENKEKLEELRKEIEPEAQKSVKATFIVDALAKAEGINVADQEVVQTI 385          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_ECOL6 (Trigger factor OS=Escherichia coli O6 GN=tig PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.872e-11
Identity = 49/217 (22.58%), Postives = 105/217 (48.39%), Query Frame = 3
Query:  108 KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKC-REVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPEYDEGSRREQVID 755
            +++PGF D I G + GE  +  + FPE +  E+L+G  A+F +  +++  R+LP+L +    +      ++E ++  + +   RE++   +++    AI + L K  +ID+P +L + +        +L+ QA  +    +  AL  P   +E  E Q +    V    L +G++ +   L+   E +   +E   +  +  K   +  S+ ++++D
Sbjct:  193 RMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAAKFAINLKKVEERELPELTEEFIKRFGVEDGSVEGLRAEVRKNMERELKSAIRNRVKSQAI-EGLVKANDIDVPAALIDSE------IDVLRRQAAQRFGGNEKQALELP---RELFEEQAKRRVVV---GLLLGEVIRTNELKADEERVKGLIEEMASAYEDPKEVIEFYSKNKELMD 396          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_ECOL5 (Trigger factor OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=tig PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.872e-11
Identity = 49/217 (22.58%), Postives = 105/217 (48.39%), Query Frame = 3
Query:  108 KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKC-REVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPEYDEGSRREQVID 755
            +++PGF D I G + GE  +  + FPE +  E+L+G  A+F +  +++  R+LP+L +    +      ++E ++  + +   RE++   +++    AI + L K  +ID+P +L + +        +L+ QA  +    +  AL  P   +E  E Q +    V    L +G++ +   L+   E +   +E   +  +  K   +  S+ ++++D
Sbjct:  193 RMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAAKFAINLKKVEERELPELTEEFIKRFGVEDGSVEGLRAEVRKNMERELKSAIRNRVKSQAI-EGLVKANDIDVPAALIDSE------IDVLRRQAAQRFGGNEKQALELP---RELFEEQAKRRVVV---GLLLGEVIRTNELKADEERVKGLIEEMASAYEDPKEVIEFYSKNKELMD 396          
The following BLAST results are available for this feature:
BLAST of EY659440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
TIG_LACGA3.442e-1123.96Trigger factor OS=Lactobacillus gasseri (strain AT... [more]
TIG_BORA13.442e-1123.39Trigger factor OS=Bordetella avium (strain 197N) G... [more]
TIG_SODGM4.496e-1119.91Trigger factor OS=Sodalis glossinidius (strain mor... [more]
TIG_LYSSC4.496e-1123.01Trigger factor OS=Lysinibacillus sphaericus (strai... [more]
TIG_BURXL4.496e-1123.44Trigger factor OS=Burkholderia xenovorans (strain ... [more]
TIG_ALKOO4.496e-1122.94Trigger factor OS=Alkaliphilus oremlandii (strain ... [more]
TIG_SACD25.872e-1125.48Trigger factor OS=Saccharophagus degradans (strain... [more]
TIG_NITSB5.872e-1122.61Trigger factor OS=Nitratiruptor sp. (strain SB155-... [more]
TIG_ECOL65.872e-1122.58Trigger factor OS=Escherichia coli O6 GN=tig PE=3 ... [more]
TIG_ECOL55.872e-1122.58Trigger factor OS=Escherichia coli O6:K15:H31 (str... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-B07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659440 ID=EY659440; Name=EY659440; organism=Citrus sinensis; type=EST; length=920bp
CAATCGTTGATATATCAGCAACAACAATAGATGCAGATGAATCAAATGTT
CAAAATATTCCAGATGCAGAGACCAAAGGATTTCATTTTGATACAGAAGA
TGGGGACAAAGTTCTTCCAGGTTTTCTTGATTCTATAAGTGGAATTCAAC
GAGGTGAAACAAAGTCCTTTCGACTCGCATTCCCTGAATCCTGGAGACAA
GAACATCTTCGTGGTGTTCAAGCTCAATTTACTGTTGAATGCAGAGAACT
GTTTTATAGAGATTTGCCGAAATTGGATGACTCCCTTGCTGGAAAGCTTC
TTCCTGGATGCACTACCATAGAGCAGGTCAAGGAAACATTATTGCAGAAG
TGTCGAGAAGTGGAGCAAACTGCAAAAGACCAGGCGACTGATAATGCAAT
TCTAGACCAGCTTTACAAGATGGTGGAAATTGATATTCCTCAATCCTTGT
TTGAGGAACAAGGAAGGCAGCTTTATGGGGCTCAACTTTTGCAGATGCAG
GCAGGTATGAAATTGAACGAACAGCAGTTGGCTGCTCTATCAAGCCCAAA
AGCAGTAAAAGAGTTTCTGGAAAACCAGACGGAGAACATAACCAATGTGA
TAAAACAGAATCTAGCCGTCGGAGATATCTTTAAACGTGAAAATTTGCAG
TTTTCGACTGAAGACTTAGTCAAAGAAGTTGAAAACTCCATTGCTGAATT
AAAACAACAGAAACCAGAATATGATGAGGGATCGCGTAGAGAACAGGTGA
TAGACATACTCGAAGGGAGCTAAAGTCTCGAATGGGTGAGAGACATGCAG
AAAATCAGTNCANACCCAGATGAGAACATACCCCATATATGAAAAGGAGC
TAGGAGTTGCAGGAGCCGGATTAAAATTGCATTGCAGAGCATTGGTGCTC
TGCAAATTTTGATTGAAAAA
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