EY659440

Overview
NameEY659440
Unique NameEY659440
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length920
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_CAMJR (Trigger factor OS=Campylobacter jejuni (strain RM1221) GN=tig PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.872e-11
Identity = 51/209 (24.40%), Postives = 103/209 (49.28%), Query Frame = 3
Query:   75 KGFHFDTEDGDK-VLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPG--CTTIEQVKETLLQKCREVEQTAK--DQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMK-LNEQQLAAL-SSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEV 680
            K  ++  E G K  +PGF D + G++ GE K  ++ FP+ +   HL G  A F V+  E+    +P+LDD +  KLLPG    ++E + E L ++ +  E+  K  +        D L +    D+P+ + E++         +QM+A     +E+++  L +S +  +E  ++  E     +K    + ++ K   ++ + ++L++ +
Sbjct:  185 KAENYVLEIGSKQFIPGFEDGMVGMKIGEEKDIKVTFPKEYGAAHLAGKDAVFKVKLHEIQELKIPELDDEMLKKLLPGEEKASVEVLDEKLKEQIKN-EKLFKLVNDELKGKFADALIEKYNFDLPKGIVEQETD-------MQMRAAFNTFSEKEIEELKASKEKYQEKRDSFKEEAQKSVKLTFIIDELAKLRKIEVNDQELIQAI 385          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_CAMJE (Trigger factor OS=Campylobacter jejuni GN=tig PE=3 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.872e-11
Identity = 51/209 (24.40%), Postives = 103/209 (49.28%), Query Frame = 3
Query:   75 KGFHFDTEDGDK-VLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPG--CTTIEQVKETLLQKCREVEQTAK--DQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMK-LNEQQLAAL-SSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEV 680
            K  ++  E G K  +PGF D + G++ GE K  ++ FP+ +   HL G  A F V+  E+    +P+LDD +  KLLPG    ++E + E L ++ +  E+  K  +        D L +    D+P+ + E++         +QM+A     +E+++  L +S +  +E  ++  E     +K    + ++ K   ++ + ++L++ +
Sbjct:  185 KAENYVLEIGSKQFIPGFEDGMVGMKIGEEKDIKVTFPKEYGAAHLAGKDAVFKVKLHEIQELKIPELDDEMLKKLLPGEEKASVEVLDEKLKEQIKN-EKLFKLVNDELKGKFADALIEKYNFDLPKGIVEQETD-------MQMRAAFNTFSEKEIEELKASKEKYQEKRDSFKEEAQKSVKLTFIIDELAKLRKIEVNDQELIQAI 385          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_CAMJ8 (Trigger factor OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=tig PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.872e-11
Identity = 51/209 (24.40%), Postives = 103/209 (49.28%), Query Frame = 3
Query:   75 KGFHFDTEDGDK-VLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPG--CTTIEQVKETLLQKCREVEQTAK--DQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMK-LNEQQLAAL-SSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEV 680
            K  ++  E G K  +PGF D + G++ GE K  ++ FP+ +   HL G  A F V+  E+    +P+LDD +  KLLPG    ++E + E L ++ +  E+  K  +        D L +    D+P+ + E++         +QM+A     +E+++  L +S +  +E  ++  E     +K    + ++ K   ++ + ++L++ +
Sbjct:  185 KAENYVLEIGSKQFIPGFEDGMVGMKIGEEKDIKVTFPKEYGAAHLAGKDAVFKVKLHEIQELKIPELDDEMLKKLLPGEEKASVEVLDEKLKEQIKN-EKLFKLVNDELKGKFADALIEKYNFDLPKGIVEQETD-------MQMRAAFNTFSEKEIEELKASKEKYQEKRDSFKEEAQKSVKLTFIIDELAKLRKIEVNDQELIQAI 385          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_BURPP (Trigger factor OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=tig PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.872e-11
Identity = 45/192 (23.44%), Postives = 86/192 (44.79%), Query Frame = 3
Query:  108 KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVE 683
            ++LP F  + +G++ GE+K F LAFPE +  + + G  AQFT+  +++ +  LP++D   A  L      + +++  +        +        N ++D L K+ E+D+P +L E+   +L         A   L ++ +             + Q E     +K  L + ++ K   LQ   E +  EV+
Sbjct:  204 RMLPEFEKAATGLKVGESKEFDLAFPEDYHGKDVAGKTAQFTITMKKIEWPHLPEIDAEFAKSLGIEDGDLTKMRAEIKDNLEREAKRRTQAIVKNQVMDALLKISELDVPNALIEQDQERLVA------MARQDLEQRGVPNAKDAPIPAAMFKEQAE---RRVKLGLVLAELVKANELQAKPEQIRAEVD 386          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_SILST (Trigger factor OS=Silicibacter sp. (strain TM1040) GN=tig PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.668e-11
Identity = 37/127 (29.13%), Postives = 65/127 (51.18%), Query Frame = 3
Query:   93 TEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQL 473
            T   +  +PGF + + G++ G+ K   + FPE +  EHL G +A F+   +E+      +++D LA K   G   ++Q+K  + ++       A  Q    A LD L ++V  D+P SL E + +Q+
Sbjct:  192 TLGSNSFIPGFEEQLVGVKAGDAKDVTVTFPEEYGAEHLAGKEAVFSCTVKEVKAPKAAEINDELAKKF--GAEDLDQLKGQISERLEAEYAGAARQVMKRAALDALAELVSFDLPPSLVEAEAKQI 316          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_HERAR (Trigger factor OS=Herminiimonas arsenicoxydans GN=tig PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.668e-11
Identity = 53/207 (25.60%), Postives = 104/207 (50.24%), Query Frame = 3
Query:   69 ETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKC-REVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQM-QAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVE 683
            + +G+ F   +G ++L  F     G++ GE+K+F L+FP  +    + G  A+FT+  +++ +  +P++D   A  L      +E+++  + Q   REV    K + T ++++D L K+ E D+P+ L +++ ++L  +    M Q GMK+++     L  P       E  TE     ++  L + ++ K   LQ   E +  +VE
Sbjct:  193 KAEGYAFVLGEG-RMLAEFEAGTIGLKVGESKTFPLSFPADYHGADVAGKTAEFTITLKQIEWAHMPEVDAEFAKSLGIEDGDLEKMRADVKQNLEREVSNRVKAR-TKDSVMDALIKISEFDVPKVLIDQETQRLMESTRQDMAQRGMKVSD-----LPFPP------ELFTEQAERRVRLGLILAEVVKANELQAKPEQVKAQVE 386          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_HELPJ (Trigger factor OS=Helicobacter pylori J99 GN=tig PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.668e-11
Identity = 57/212 (26.89%), Postives = 100/212 (47.17%), Query Frame = 3
Query:   24 TIDADESNVQNIPDAETKGFHFDTEDGDK-VLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPG--CTTIEQVKETLL-QKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENL 647
            TID  E  + N P    K  +F    G K +L  F  ++ G+Q  E K F L FP  +  EHL G +A F V+ R++  R+  +++D LA  +L      T+E +KE +  Q   E +    ++     +++ L + +  D+P+++ E++   L+   L  MQA     E+  +   S +  KE  E+   + T  +K    +  + K E +
Sbjct:  169 TIDF-EGFIDNAPFEGGKAENFSLILGSKQMLEDFEKALLGMQASEEKEFPLTFPSGYHAEHLAGKEALFKVKLRQIQVREALEINDELAKIVLANEENATLELLKERVKGQLFLENKARLYNEELKEKLIENLDEKILFDLPKTIIEQEMDLLFRNALYSMQA-----EEVKSLQDSQEKAKEKRESFRNDATKSVKITFVIDALAKEEKI 374          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_ESCF3 (Trigger factor OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=tig PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.668e-11
Identity = 49/217 (22.58%), Postives = 105/217 (48.39%), Query Frame = 3
Query:  108 KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKC-REVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPEYDEGSRREQVID 755
            +++PGF D I G + GE  +  + FPE +  E+L+G  A+F +  +++  R+LP+L +    +      ++E ++  + +   RE++   +++    AI + L K  +ID+P +L + +        +L+ QA  +    +  AL  P   +E  E Q +    V    L +G++ +   L+   E +   +E   +  +  K   +  S+ ++++D
Sbjct:  193 RMIPGFEDGIKGHKAGEEFTIDVTFPEDYHAENLKGKAAKFAINLKKVEERELPELTEDFIKRFGVEDGSVEGLRAEVRKNMERELKGAVRNRVKSQAI-EGLVKANDIDVPAALIDSE------IDVLRRQAAQRFGGNEKQALELP---RELFEEQAKRRVVV---GLLLGEVIRTNELKADEERVKGLIEEMASAYEDPKEVIEFYSKNKELMD 396          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_BURTA (Trigger factor OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=tig PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.668e-11
Identity = 46/194 (23.71%), Postives = 89/194 (45.88%), Query Frame = 3
Query:  108 KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFL--ENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVE 683
            ++LP F  +  G++ GE + F L FP+ +  + + G  AQFTV  +++ +  LP +D   A  L      + +++E + +      +        N ++D L K+ E+D+P++L E+  ++L           +++  Q LA    P A    +  E   E     +K  L + ++ K   L+   E +  EV+
Sbjct:  205 RMLPEFETAALGLKTGEAREFDLKFPDDYHGKDVAGKTAQFTVTMKKVEWPHLPAIDADFAKSLGIEDGDLTKMREEIKENLGREAKRRTQSIVKNQVMDALLKISELDVPKALIEQDQQRL-----------VEMARQDLAQRGVPNAKDAPIPVEMFAEQAERRVKLGLVLAELVKANGLEAKPEQIRAEVD 387          
The following BLAST results are available for this feature:
BLAST of EY659440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
TIG_CAMJR5.872e-1124.40Trigger factor OS=Campylobacter jejuni (strain RM1... [more]
TIG_CAMJE5.872e-1124.40Trigger factor OS=Campylobacter jejuni GN=tig PE=3... [more]
TIG_CAMJ85.872e-1124.40Trigger factor OS=Campylobacter jejuni subsp. jeju... [more]
TIG_BURPP5.872e-1123.44Trigger factor OS=Burkholderia phytofirmans (strai... [more]
TIG_SILST7.668e-1129.13Trigger factor OS=Silicibacter sp. (strain TM1040)... [more]
TIG_HERAR7.668e-1125.60Trigger factor OS=Herminiimonas arsenicoxydans GN=... [more]
TIG_HELPJ7.668e-1126.89Trigger factor OS=Helicobacter pylori J99 GN=tig P... [more]
TIG_ESCF37.668e-1122.58Trigger factor OS=Escherichia fergusonii (strain A... [more]
TIG_BURTA7.668e-1123.71Trigger factor OS=Burkholderia thailandensis (stra... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-B07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659440 ID=EY659440; Name=EY659440; organism=Citrus sinensis; type=EST; length=920bp
CAATCGTTGATATATCAGCAACAACAATAGATGCAGATGAATCAAATGTT
CAAAATATTCCAGATGCAGAGACCAAAGGATTTCATTTTGATACAGAAGA
TGGGGACAAAGTTCTTCCAGGTTTTCTTGATTCTATAAGTGGAATTCAAC
GAGGTGAAACAAAGTCCTTTCGACTCGCATTCCCTGAATCCTGGAGACAA
GAACATCTTCGTGGTGTTCAAGCTCAATTTACTGTTGAATGCAGAGAACT
GTTTTATAGAGATTTGCCGAAATTGGATGACTCCCTTGCTGGAAAGCTTC
TTCCTGGATGCACTACCATAGAGCAGGTCAAGGAAACATTATTGCAGAAG
TGTCGAGAAGTGGAGCAAACTGCAAAAGACCAGGCGACTGATAATGCAAT
TCTAGACCAGCTTTACAAGATGGTGGAAATTGATATTCCTCAATCCTTGT
TTGAGGAACAAGGAAGGCAGCTTTATGGGGCTCAACTTTTGCAGATGCAG
GCAGGTATGAAATTGAACGAACAGCAGTTGGCTGCTCTATCAAGCCCAAA
AGCAGTAAAAGAGTTTCTGGAAAACCAGACGGAGAACATAACCAATGTGA
TAAAACAGAATCTAGCCGTCGGAGATATCTTTAAACGTGAAAATTTGCAG
TTTTCGACTGAAGACTTAGTCAAAGAAGTTGAAAACTCCATTGCTGAATT
AAAACAACAGAAACCAGAATATGATGAGGGATCGCGTAGAGAACAGGTGA
TAGACATACTCGAAGGGAGCTAAAGTCTCGAATGGGTGAGAGACATGCAG
AAAATCAGTNCANACCCAGATGAGAACATACCCCATATATGAAAAGGAGC
TAGGAGTTGCAGGAGCCGGATTAAAATTGCATTGCAGAGCATTGGTGCTC
TGCAAATTTTGATTGAAAAA
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