EY659440

Overview
NameEY659440
Unique NameEY659440
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length920
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_PROM4 (Trigger factor OS=Prochlorococcus marinus (strain MIT 9211) GN=tig PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.132e-15
Identity = 57/250 (22.80%), Postives = 119/250 (47.60%), Query Frame = 3
Query:   45 NVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPEYDEGSRREQVIDILEGS*SLEWVRD 794
            N   I    +     + E G +++PGF++ I G+   + K+    FP+ + QE  R  +A+F ++ ++L  R+LPKLDD  A K      ++E++++ L  K +E       +    A+L  L + +EID+P++L E + R L    + Q           + +  +P+ + + +++        +++  A+  + K E ++   +++ K+ E    EL ++K   D    +E V++ L       W+ +
Sbjct:  188 NNSPIEGGNSDSMDIELEKG-QMIPGFVEGIIGMNINDEKTVECTFPKDYPQEDARNRKAKFDIKVKDLKTRELPKLDDDFA-KQASDKDSLEELRKELEAKLKEDAHQRSIKNRQEALLKALVEQLEIDLPKTLIEIETRNL----IEQTARNFAQQGIDVKSTFTPELINKLMDSSRPEAIENLRRQFAMQALRKEEGIEVPNKEVDKKFEEVKKELSKEK-NIDFEKLKEAVLEDLLQDKVFTWLEE 430          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_THETN (Trigger factor OS=Thermoanaerobacter tengcongensis GN=tig PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.702e-15
Identity = 63/246 (25.61%), Postives = 117/246 (47.56%), Query Frame = 3
Query:   39 ESNVQNIPDAETKGFHFDTEDGDKV-LPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREV-EQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSS--PKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPEYDEGSRREQVIDILE 764
            E  + + P    KG +++ E G    +PGF D I     GET    + FPE +R E L+G  A F V  + L  ++LP+LDD  A K +    T+E++K+ + +K  E  ++ A+++  + A++ ++ +  ++DIP  + E Q        L  +   ++L    L    S   K +++  +   E   N +K  L +  I K EN++ + E+L  +++      +    E+ +     Q+  I E
Sbjct:  171 EGYIDDKPFEGGKGENYELELGSNTFVPGFEDQIISHNVGETFDVTVTFPEDYRVEELKGKTAVFKVTLKALNKKELPELDDEFA-KDVSEFETLEELKQDIRKKLEEKNKREAENEMKEKAVM-KVVENAKVDIPDVMVERQ----IDLSLRDLDYNLRLQGLDLNTYLSITGKTIQDLRKEMWEGALNRVKTQLVIDKIAKVENIEATEEELENKLKELAESYRVNLEEFKKSLTESQINGIKE 410          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_RUBXD (Trigger factor OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=tig PE=3 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 6.702e-15
Identity = 57/230 (24.78%), Postives = 114/230 (49.57%), Query Frame = 3
Query:   57 IPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQA-GMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPEYDEGSRRE 743
            +P AE + +  +   G+ +L  F  ++ G++ GE K F + FP  +R+E LRG    F V  +E+  RDLP LDD  A K      T+E+++  + ++  E  +   +      +L+ + +  E+++P+ + E++  ++  +    + A G+K  +    A +     +EF     ++  + +K+ L +  +   E ++   E +  E+E+ +AE   + PE  E S RE
Sbjct:  181 LPGAEAEDYMLEVGRGE-LLEDFEKNLVGMKAGERKQFAVTFPMDYREESLRGQSVLFRVHVKEIKERDLPPLDDEFA-KEASEFETLEELRAAIREQLEEAARRRAEGEFRARVLEAVAERAEVEVPEVMVEDKAEEMVRSFERSVSAQGIKPEDYYRIAGTGR---EEFKRQVRDDAADTVKKELVLDAVVAAEGIEADEEAVRHEIEH-LAEDSGRSPEEVEKSLRE 404          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_HALOH (Trigger factor OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=tig PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.702e-15
Identity = 53/203 (26.11%), Postives = 107/203 (52.71%), Query Frame = 3
Query:  114 LPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQA-GMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPE 719
            +PGF + + G + GE     + FPE ++ E L G  A F V+ +E+  ++ P+LDD  A K      T+E++K+ + ++    ++    +  ++ I+D++ +  E+D+P++L   +   +Y      + + GMK+ E  L ++   +  + + E   E      K NL +  I K+E ++ + E++  ++E  IA+  +QKPE
Sbjct:  197 IPGFEEQLVGKKVGEETEVEVTFPEDYQAEDLAGKDAVFKVDIKEIKVKETPELDDEFA-KEASEFDTLEELKDDIKERLTSQKEDRARRKLEDEIVDRVTENAEVDVPETLVNNELDMMYQNLAYSISSYGMKV-EDYLKSMGLDE--ESWREENREEAEKRAKSNLVLEAIGKKEGIEVTDEEIDNKIE-EIAKDGEQKPE 394          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_GEOKA (Trigger factor OS=Geobacillus kaustophilus GN=tig PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.702e-15
Identity = 60/229 (26.20%), Postives = 110/229 (48.03%), Query Frame = 3
Query:    6 VDISATTIDADESNVQNIPDAETKGFHFDTEDGDKV-LPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGA--QLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVE 683
            V+   T +   E  V   P    K  ++  E G    +PGF + + G++ GE K  ++ FP+ +  + L G  A F V+  E+  + LP LDD  A  +     T++++K  +  +  E ++   + A  NA++++     E+DIP+ + + +  ++     Q LQMQ G+ L   QL    S +      E   E+    ++  L +  I K EN++ + E++ KE+E
Sbjct:  160 VENGDTVVIDFEGFVDGEPFEGGKAENYSLEIGSGTFIPGFEEQLVGMKAGEEKEIQVTFPDEYHAKQLAGKPATFKVKVHEVKAKQLPALDDEFAKDVDEEVETLDELKAKIRARLEEAKKNEAETALRNAVVEKAAANAEMDIPEVMIKNETDRMLREFDQRLQMQ-GLNL---QLYYQFSGQDEASLREQMKEDAEKRVRAALTLEAIAKAENIEVTDEEVNKELE 384          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_BACLD (Trigger factor OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=tig PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.702e-15
Identity = 55/191 (28.80%), Postives = 95/191 (49.74%), Query Frame = 3
Query:  114 LPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYG--AQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEV 680
            +PGF D + G++ G  K   + FPE +  E L G  A F V+  E+  ++LP+LDD  A  +     T+ ++ E   ++  E ++   D      ++ +  +  E DIPQ++ + +  ++     Q LQMQ GM L      +     A+KE ++   E     +K NL +  I K ENLQ + E++ +E+
Sbjct:  197 IPGFEDQLVGLEAGAEKDVEVTFPEEYHAEELAGKPAVFKVKIHEIKAKELPELDDEFAKDVDEEVGTLAELTEKTKKRLEEAKENEADAKLREELVLKAAENAEADIPQAMIDTELDRMMKEFEQRLQMQ-GMNLELYFQFSGQDENALKEQMKEDAE---KRVKSNLTLEAIAKAENLQVTDEEVEEEL 383          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_GLOVI (Trigger factor OS=Gloeobacter violaceus GN=tig PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.753e-15
Identity = 60/237 (25.32%), Postives = 113/237 (47.68%), Query Frame = 3
Query:  108 KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQL--AALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPE--YDEGSRREQVIDILEGS*SLEWVRDMQKI 806
            +++ GF + I G+Q GE+    L FP+ + Q+ L GV A+F V  ++L  ++LP LDD  AG  +    T+E ++  L Q+ +E          D AI+  L     +D+P++L   +       Q L  Q+   L +Q +  + + + + +    E    +  N +K+ LA+  + + EN+    E +   +    +EL+++  E    E +R E + + +     LEW+ +   I
Sbjct:  203 RLIAGFTEGIIGMQIGESTELALRFPDDYPQQELAGVDAKFAVSLKDLKIKELPVLDDDFAGD-ISEFETLEALRAFLEQQQQEQAAEKTRANRDAAIIKALVAETTVDLPETLVNRE------VQFLAEQSFRNLQQQGIDPSRIFTEENMPRVRETLRVDAENRLKRTLALAQVARAENIVVEEEQVAARIVELRSELEEEVSEQALAEFAREEMLTEKI-----LEWLAEHSTI 427          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_CARHZ (Trigger factor OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=tig PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.143e-14
Identity = 59/213 (27.70%), Postives = 105/213 (49.30%), Query Frame = 3
Query:   84 HFDTEDGDKV-LPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPE 719
            ++  E G KV +PGF + I G++ GETK   + FPE +++E L G  A FTV  +E+  ++L  LDD  A K +   +T+ ++KE L +K  + ++    +  +  ++++      ++IP S+   +   +      +++      EQ L      K + E  E         +K  L +  I K+E +  + E++ KE+   IAEL QQ  E
Sbjct:  186 NYRLELGSKVFIPGFEEQIVGMKPGETKEINVTFPEDYQKEDLAGKPAVFTVTLKEIKRKELAPLDDEFA-KDVSEFSTLAELKEDLKKKIAQTKENISREKMEAEVVEKAVDNANVEIPASMVNHEVEHILHHFEEELKYRRLTLEQYLN--YQKKTLDELKEELKPRAERNVKTELVLEAIAKKEGITATDEEIDKEL-GKIAELYQQPVE 394          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_CLONN (Trigger factor OS=Clostridium novyi (strain NT) GN=tig PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.493e-14
Identity = 54/220 (24.55%), Postives = 108/220 (49.09%), Query Frame = 3
Query:  114 LPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQ-GRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPEYDEGSRREQVIDILEGS 770
            +  F D + G++ GE K   + FPE + +E L G  A+F V+ +E+  ++LP LDD  A K +    T++ +K  L  K  E  +  +    + A+++++    E++IP+ + E++    L   ++     G+ L        SS   V+E+++   E     +K  L +  I K E ++ +TE+ +KE        K+   +Y  G   +++++ + G+
Sbjct:  198 IDNFEDQLVGLKVGEEKEVNVNFPEQYGREELNGKPAKFEVKIKEIKVKELPALDDEFA-KEVSEFDTVDALKADLKTKLEEANKNREKVEYEEAVIEEVCNRAEVEIPEVMIEKEIDMMLKDLEMRLGYQGLDLASYYQYTNSSEAKVREYMKETAE---KKVKTELVLEKIVKDEKIE-ATEEEIKE------RAKEMAQQYGGGQDADKLVEAIVGA 406          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_STAAR (Trigger factor OS=Staphylococcus aureus (strain MRSA252) GN=tig PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.547e-14
Identity = 59/238 (24.79%), Postives = 114/238 (47.90%), Query Frame = 3
Query:   87 FDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYG--AQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVEN-------SIAELKQQKPEYD---EGSRREQVIDIL 761
            +D E G    +PGF + + G++  E K   + FPE +  E L G +A F  +  E+ ++++P+L D +A +L     T+++ KE L ++  E + T  +       + +      IDIP+++   +  ++    AQ +Q Q G+ L      +      ++E +++  E     +K NL +  I + E ++ + ED+ KE+E        S+ ++K      D      R ++VID+L
Sbjct:  187 YDLEIGSGSFIPGFEEQLEGMKVDEEKDVVVTFPEEYHAEELAGKEATFKTKVNEIKFKEVPELTDEIANELDAEANTVDEYKENLRKRLAEQKATDAENVEKEEAITKATDNTTIDIPEAMVNTELDRMVSEFAQRIQQQ-GLDLQTYFQISGQDESQLREQMKDDAE---QRVKTNLTLTAIAEAEKIEATDEDIDKELEKMSKQFNISVEDIKNTLGNTDIIKNDVRIQKVIDLL 420          
The following BLAST results are available for this feature:
BLAST of EY659440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
TIG_PROM45.132e-1522.80Trigger factor OS=Prochlorococcus marinus (strain ... [more]
TIG_THETN6.702e-1525.61Trigger factor OS=Thermoanaerobacter tengcongensis... [more]
TIG_RUBXD6.702e-1524.78Trigger factor OS=Rubrobacter xylanophilus (strain... [more]
TIG_HALOH6.702e-1526.11Trigger factor OS=Halothermothrix orenii (strain H... [more]
TIG_GEOKA6.702e-1526.20Trigger factor OS=Geobacillus kaustophilus GN=tig ... [more]
TIG_BACLD6.702e-1528.80Trigger factor OS=Bacillus licheniformis (strain D... [more]
TIG_GLOVI8.753e-1525.32Trigger factor OS=Gloeobacter violaceus GN=tig PE=... [more]
TIG_CARHZ1.143e-1427.70Trigger factor OS=Carboxydothermus hydrogenoforman... [more]
TIG_CLONN1.493e-1424.55Trigger factor OS=Clostridium novyi (strain NT) GN... [more]
TIG_STAAR2.547e-1424.79Trigger factor OS=Staphylococcus aureus (strain MR... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-B07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659440 ID=EY659440; Name=EY659440; organism=Citrus sinensis; type=EST; length=920bp
CAATCGTTGATATATCAGCAACAACAATAGATGCAGATGAATCAAATGTT
CAAAATATTCCAGATGCAGAGACCAAAGGATTTCATTTTGATACAGAAGA
TGGGGACAAAGTTCTTCCAGGTTTTCTTGATTCTATAAGTGGAATTCAAC
GAGGTGAAACAAAGTCCTTTCGACTCGCATTCCCTGAATCCTGGAGACAA
GAACATCTTCGTGGTGTTCAAGCTCAATTTACTGTTGAATGCAGAGAACT
GTTTTATAGAGATTTGCCGAAATTGGATGACTCCCTTGCTGGAAAGCTTC
TTCCTGGATGCACTACCATAGAGCAGGTCAAGGAAACATTATTGCAGAAG
TGTCGAGAAGTGGAGCAAACTGCAAAAGACCAGGCGACTGATAATGCAAT
TCTAGACCAGCTTTACAAGATGGTGGAAATTGATATTCCTCAATCCTTGT
TTGAGGAACAAGGAAGGCAGCTTTATGGGGCTCAACTTTTGCAGATGCAG
GCAGGTATGAAATTGAACGAACAGCAGTTGGCTGCTCTATCAAGCCCAAA
AGCAGTAAAAGAGTTTCTGGAAAACCAGACGGAGAACATAACCAATGTGA
TAAAACAGAATCTAGCCGTCGGAGATATCTTTAAACGTGAAAATTTGCAG
TTTTCGACTGAAGACTTAGTCAAAGAAGTTGAAAACTCCATTGCTGAATT
AAAACAACAGAAACCAGAATATGATGAGGGATCGCGTAGAGAACAGGTGA
TAGACATACTCGAAGGGAGCTAAAGTCTCGAATGGGTGAGAGACATGCAG
AAAATCAGTNCANACCCAGATGAGAACATACCCCATATATGAAAAGGAGC
TAGGAGTTGCAGGAGCCGGATTAAAATTGCATTGCAGAGCATTGGTGCTC
TGCAAATTTTGATTGAAAAA
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