EY659440

Overview
NameEY659440
Unique NameEY659440
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length920
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_STAAE (Trigger factor OS=Staphylococcus aureus (strain Newman) GN=tig PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.547e-14
Identity = 59/238 (24.79%), Postives = 114/238 (47.90%), Query Frame = 3
Query:   87 FDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYG--AQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVEN-------SIAELKQQKPEYD---EGSRREQVIDIL 761
            +D E G    +PGF + + G++  E K   + FPE +  E L G +A F  +  E+ ++++P+L D +A +L     T+++ KE L ++  E + T  +       + +      IDIP+++   +  ++    AQ +Q Q G+ L      +      ++E +++  E     +K NL +  I + E ++ + ED+ KE+E        S+ ++K      D      R ++VID+L
Sbjct:  187 YDLEIGSGSFIPGFEEQLEGMKVDEEKDVVVTFPEEYHAEELAGKEATFKTKVNEIKFKEVPELTDEIANELDAEANTVDEYKENLRKRLAEQKATDAENVEKEEAITKATDNTTIDIPEAMINTELDRMVSEFAQRIQQQ-GLDLQTYFQISGQDETQLREQMKDDAE---QRVKTNLTLTAIAEAEKIEATDEDIDKELEKMSKQFNISVEDIKNTLGNTDIIKNDVRIQKVIDLL 420          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_STAAB (Trigger factor OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=tig PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.547e-14
Identity = 59/238 (24.79%), Postives = 114/238 (47.90%), Query Frame = 3
Query:   87 FDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYG--AQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVEN-------SIAELKQQKPEYD---EGSRREQVIDIL 761
            +D E G    +PGF + + G++  E K   + FPE +  E L G +A F  +  E+ ++++P+L D +A +L     T+++ KE L ++  E + T  +       + +      IDIP+++   +  ++    AQ +Q Q G+ L      +      ++E +++  E     +K NL +  I + E ++ + ED+ KE+E        S+ ++K      D      R ++VID+L
Sbjct:  187 YDLEIGSGSFIPGFEEQLEGMKVDEEKDVVVTFPEEYHAEELAGKEATFKTKVNEIKFKEVPELTDEIANELDAEANTVDEYKENLRKRLAEQKATDAENVEKEEAITKATDNTTIDIPEAMVNTELDRMVSEFAQRIQQQ-GLDLQTYFQISGQDESQLREQMKDDAE---QRVKTNLTLTAIAEAEKIEATDEDIDKELEKMSKQFNISVEDIKNTLGNTDIIKNDVRIQKVIDLL 420          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_PROM9 (Trigger factor OS=Prochlorococcus marinus (strain MIT 9312) GN=tig PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.547e-14
Identity = 56/208 (26.92%), Postives = 115/208 (55.29%), Query Frame = 3
Query:  105 DKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCRE-VEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALS--SPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDL---VKEVENSIAELKQQ 710
            +K++PGF++ I  ++ G+TK+  L FPE +  E  RG +A F V  ++L  ++LP+L+D  A K      +++++K+ + ++ +E  E+T KD   + A+LD L   +  +IP+S+ + + R          Q   +  +Q L   S  +P+ VK   E+        +++NLA+  + ++EN+    +++   +K+ E++I++  +Q
Sbjct:  207 NKMIPGFVEGIVKMKIGDTKTLNLKFPEDYSHEDSRGKEAIFEVSLKDLKEKELPELNDDFA-KQSGNKESLKELKKDIEKQLKENFEKTQKDIKIE-ALLDALTNELVAEIPKSMIDIEVRNNI------EQTAQRFAQQGLDVKSTFTPELVKSLSESTRPQAEKNVQRNLALKALAEKENITVEKDEIDLKMKDYEDAISQSSKQ 406          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_EXISA (Trigger factor OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=tig PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.547e-14
Identity = 55/198 (27.78%), Postives = 103/198 (52.02%), Query Frame = 3
Query:  114 LPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQ-----KCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQL---YGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVE 683
            +PGF + + G+  GE K   + FPE +  E+L G  A F V+  E+  + +P+LDD  A  +    +T++++K ++ +     K +E E T +DQ  + A  +       ID+P+ L E++  ++   +G+++     G+ LN       +S +A++E ++ Q E     +K  L +  I  +E ++ S ED  KE+E
Sbjct:  197 IPGFEEQMIGMTAGEEKDVEVTFPEEYHAENLAGKPATFKVKLHEVKTKQVPELDDEFAKDIDESVSTLDELKASIRERLEAGKKQEAEGTMRDQLVEQATAN-----ATIDVPEVLVEQEVDRMVQEFGSRV--SSQGIDLNMYFELTGTSEEAMREEMKEQAE---ERVKARLVLKAIADKEAIEVSDEDAEKELE 384          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_ALKMQ (Trigger factor OS=Alkaliphilus metalliredigens (strain QYMF) GN=tig PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.547e-14
Identity = 57/227 (25.11%), Postives = 100/227 (44.05%), Query Frame = 3
Query:   93 TEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKE--FLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPEYDEGSRREQVIDILEG 767
            T   ++ +PGF + + G   G+    ++ FPE +  E L G +A F V   E+  ++LP LDD  A K +    T+ ++K  L  K  E  +   +Q   N +++ +   VE++IP ++ E Q   +    LL     +K     L +       KE        E+     KQ L +  I + E ++ +  D+ +E+E    + KQ+  +     R +    I EG
Sbjct:  190 TIGSNQFIPGFEEQLIGASIGDEIKVKVTFPEEYHSEELAGKEATFEVMVHEIKEKELPALDDEFA-KDVSEFDTLAELKADLSTKLEESAKKRTEQEYRNNVIEAVANQVELEIPNAVIERQINNM----LLDFDYQLKYQGMTLESYYQMTGTKEEDLRGQMREDAEKRAKQQLVLDRISEMEKIEATETDVSEELERMATQYKQELDKLKSNLRDQDYTSIKEG 411          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_STAAW (Trigger factor OS=Staphylococcus aureus (strain MW2) GN=tig PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.326e-14
Identity = 59/238 (24.79%), Postives = 114/238 (47.90%), Query Frame = 3
Query:   87 FDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYG--AQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVEN-------SIAELKQQKPEYD---EGSRREQVIDIL 761
            +D E G    +PGF + + G++  E K   + FPE +  E L G +A F  +  E+ ++++P+L D +A +L     T+++ KE L ++  E + T  +       + +      IDIP+++   +  ++    AQ +Q Q G+ L      +      ++E +++  E     +K NL +  I + E ++ + ED+ KE+E        S+ ++K      D      R ++VID+L
Sbjct:  187 YDLEIGSGSFIPGFEEQLEGMKVDEEKDVVVTFPEEYHAEELAGKEATFKTKVNEIKFKEVPELTDEIANELDAEANTVDEYKENLRKRLAEQKATDAENVEKEEAITKATDNTTIDIPEAMVNTELDRMVSEFAQRIQQQ-GLDLQTYFQISGQDETQLREQMKDDAE---QRVKTNLTLTAIAEAEKIEATDEDIDKELEKMSKQFNISVEDIKNTLGNTDIIKNDVRIQKVIDLL 420          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_STAAT (Trigger factor OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=tig PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.326e-14
Identity = 59/238 (24.79%), Postives = 114/238 (47.90%), Query Frame = 3
Query:   87 FDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYG--AQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVEN-------SIAELKQQKPEYD---EGSRREQVIDIL 761
            +D E G    +PGF + + G++  E K   + FPE +  E L G +A F  +  E+ ++++P+L D +A +L     T+++ KE L ++  E + T  +       + +      IDIP+++   +  ++    AQ +Q Q G+ L      +      ++E +++  E     +K NL +  I + E ++ + ED+ KE+E        S+ ++K      D      R ++VID+L
Sbjct:  187 YDLEIGSGSFIPGFEEQLEGMKVDEEKDVVVTFPEEYHAEELAGKEATFKTKVNEIKFKEVPELTDEIANELDAEANTVDEYKENLRKRLAEQKATDAENVEKEEAITKATDNTTIDIPEAMVNTELDRMVSEFAQRIQQQ-GLDLQTYFQISGQDETQLREQMKDDAE---QRVKTNLTLTAIAEAEKIEATDEDIDKELEKMSKQFNISVEDIKNTLGNTDIIKNDVRIQKVIDLL 420          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_STAAS (Trigger factor OS=Staphylococcus aureus (strain MSSA476) GN=tig PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.326e-14
Identity = 59/238 (24.79%), Postives = 114/238 (47.90%), Query Frame = 3
Query:   87 FDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYG--AQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVEN-------SIAELKQQKPEYD---EGSRREQVIDIL 761
            +D E G    +PGF + + G++  E K   + FPE +  E L G +A F  +  E+ ++++P+L D +A +L     T+++ KE L ++  E + T  +       + +      IDIP+++   +  ++    AQ +Q Q G+ L      +      ++E +++  E     +K NL +  I + E ++ + ED+ KE+E        S+ ++K      D      R ++VID+L
Sbjct:  187 YDLEIGSGSFIPGFEEQLEGMKVDEEKDVVVTFPEEYHAEELAGKEATFKTKVNEIKFKEVPELTDEIANELDAEANTVDEYKENLRKRLAEQKATDAENVEKEEAITKATDNTTIDIPEAMVNTELDRMVSEFAQRIQQQ-GLDLQTYFQISGQDETQLREQMKDDAE---QRVKTNLTLTAIAEAEKIEATDEDIDKELEKMSKQFNISVEDIKNTLGNTDIIKNDVRIQKVIDLL 420          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_STAAN (Trigger factor OS=Staphylococcus aureus (strain N315) GN=tig PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.326e-14
Identity = 59/238 (24.79%), Postives = 114/238 (47.90%), Query Frame = 3
Query:   87 FDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYG--AQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVEN-------SIAELKQQKPEYD---EGSRREQVIDIL 761
            +D E G    +PGF + + G++  E K   + FPE +  E L G +A F  +  E+ ++++P+L D +A +L     T+++ KE L ++  E + T  +       + +      IDIP+++   +  ++    AQ +Q Q G+ L      +      ++E +++  E     +K NL +  I + E ++ + ED+ KE+E        S+ ++K      D      R ++VID+L
Sbjct:  187 YDLEIGSGSFIPGFEEQLEGMKVDEEKDVVVTFPEEYHAEELAGKEATFKTKVNEIKFKEVPELTDEIANELDAEANTVDEYKENLRKRLAEQKATDAENVEKEEAITKATDNTTIDIPEAMVNTELDRMVSEFAQRIQQQ-GLDLQTYFQISGQDETQLREQMKDDAE---QRVKTNLTLTAIAEAEKIEATDEDIDKELEKMSKQFNISVEDIKNTLGNTDIIKNDVRIQKVIDLL 420          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_STAAM (Trigger factor OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=tig PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.326e-14
Identity = 59/238 (24.79%), Postives = 114/238 (47.90%), Query Frame = 3
Query:   87 FDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYG--AQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVEN-------SIAELKQQKPEYD---EGSRREQVIDIL 761
            +D E G    +PGF + + G++  E K   + FPE +  E L G +A F  +  E+ ++++P+L D +A +L     T+++ KE L ++  E + T  +       + +      IDIP+++   +  ++    AQ +Q Q G+ L      +      ++E +++  E     +K NL +  I + E ++ + ED+ KE+E        S+ ++K      D      R ++VID+L
Sbjct:  187 YDLEIGSGSFIPGFEEQLEGMKVDEEKDVVVTFPEEYHAEELAGKEATFKTKVNEIKFKEVPELTDEIANELDAEANTVDEYKENLRKRLAEQKATDAENVEKEEAITKATDNTTIDIPEAMVNTELDRMVSEFAQRIQQQ-GLDLQTYFQISGQDETQLREQMKDDAE---QRVKTNLTLTAIAEAEKIEATDEDIDKELEKMSKQFNISVEDIKNTLGNTDIIKNDVRIQKVIDLL 420          
The following BLAST results are available for this feature:
BLAST of EY659440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
TIG_STAAE2.547e-1424.79Trigger factor OS=Staphylococcus aureus (strain Ne... [more]
TIG_STAAB2.547e-1424.79Trigger factor OS=Staphylococcus aureus (strain bo... [more]
TIG_PROM92.547e-1426.92Trigger factor OS=Prochlorococcus marinus (strain ... [more]
TIG_EXISA2.547e-1427.78Trigger factor OS=Exiguobacterium sp. (strain ATCC... [more]
TIG_ALKMQ2.547e-1425.11Trigger factor OS=Alkaliphilus metalliredigens (st... [more]
TIG_STAAW3.326e-1424.79Trigger factor OS=Staphylococcus aureus (strain MW... [more]
TIG_STAAT3.326e-1424.79Trigger factor OS=Staphylococcus aureus (strain US... [more]
TIG_STAAS3.326e-1424.79Trigger factor OS=Staphylococcus aureus (strain MS... [more]
TIG_STAAN3.326e-1424.79Trigger factor OS=Staphylococcus aureus (strain N3... [more]
TIG_STAAM3.326e-1424.79Trigger factor OS=Staphylococcus aureus (strain Mu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-B07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659440 ID=EY659440; Name=EY659440; organism=Citrus sinensis; type=EST; length=920bp
CAATCGTTGATATATCAGCAACAACAATAGATGCAGATGAATCAAATGTT
CAAAATATTCCAGATGCAGAGACCAAAGGATTTCATTTTGATACAGAAGA
TGGGGACAAAGTTCTTCCAGGTTTTCTTGATTCTATAAGTGGAATTCAAC
GAGGTGAAACAAAGTCCTTTCGACTCGCATTCCCTGAATCCTGGAGACAA
GAACATCTTCGTGGTGTTCAAGCTCAATTTACTGTTGAATGCAGAGAACT
GTTTTATAGAGATTTGCCGAAATTGGATGACTCCCTTGCTGGAAAGCTTC
TTCCTGGATGCACTACCATAGAGCAGGTCAAGGAAACATTATTGCAGAAG
TGTCGAGAAGTGGAGCAAACTGCAAAAGACCAGGCGACTGATAATGCAAT
TCTAGACCAGCTTTACAAGATGGTGGAAATTGATATTCCTCAATCCTTGT
TTGAGGAACAAGGAAGGCAGCTTTATGGGGCTCAACTTTTGCAGATGCAG
GCAGGTATGAAATTGAACGAACAGCAGTTGGCTGCTCTATCAAGCCCAAA
AGCAGTAAAAGAGTTTCTGGAAAACCAGACGGAGAACATAACCAATGTGA
TAAAACAGAATCTAGCCGTCGGAGATATCTTTAAACGTGAAAATTTGCAG
TTTTCGACTGAAGACTTAGTCAAAGAAGTTGAAAACTCCATTGCTGAATT
AAAACAACAGAAACCAGAATATGATGAGGGATCGCGTAGAGAACAGGTGA
TAGACATACTCGAAGGGAGCTAAAGTCTCGAATGGGTGAGAGACATGCAG
AAAATCAGTNCANACCCAGATGAGAACATACCCCATATATGAAAAGGAGC
TAGGAGTTGCAGGAGCCGGATTAAAATTGCATTGCAGAGCATTGGTGCTC
TGCAAATTTTGATTGAAAAA
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