EY659440

Overview
NameEY659440
Unique NameEY659440
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length920
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_STAAC (Trigger factor OS=Staphylococcus aureus (strain COL) GN=tig PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.326e-14
Identity = 59/238 (24.79%), Postives = 114/238 (47.90%), Query Frame = 3
Query:   87 FDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYG--AQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVEN-------SIAELKQQKPEYD---EGSRREQVIDIL 761
            +D E G    +PGF + + G++  E K   + FPE +  E L G +A F  +  E+ ++++P+L D +A +L     T+++ KE L ++  E + T  +       + +      IDIP+++   +  ++    AQ +Q Q G+ L      +      ++E +++  E     +K NL +  I + E ++ + ED+ KE+E        S+ ++K      D      R ++VID+L
Sbjct:  187 YDLEIGSGSFIPGFEEQLEGMKVDEEKDVVVTFPEEYHAEELAGKEATFKTKVNEIKFKEVPELTDEIANELDAEANTVDEYKENLRKRLAEQKATDAENVEKEEAITKATDNTTIDIPEAMVNTELDRMVSEFAQRIQQQ-GLDLQTYFQISGQDETQLREQMKDDAE---QRVKTNLTLTAIAEAEKIEATDEDIDKELEKMSKQFNISVEDIKNTLGNTDIIKNDVRIQKVIDLL 420          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_STAA9 (Trigger factor OS=Staphylococcus aureus (strain JH9) GN=tig PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.326e-14
Identity = 59/238 (24.79%), Postives = 114/238 (47.90%), Query Frame = 3
Query:   87 FDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYG--AQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVEN-------SIAELKQQKPEYD---EGSRREQVIDIL 761
            +D E G    +PGF + + G++  E K   + FPE +  E L G +A F  +  E+ ++++P+L D +A +L     T+++ KE L ++  E + T  +       + +      IDIP+++   +  ++    AQ +Q Q G+ L      +      ++E +++  E     +K NL +  I + E ++ + ED+ KE+E        S+ ++K      D      R ++VID+L
Sbjct:  187 YDLEIGSGSFIPGFEEQLEGMKVDEEKDVVVTFPEEYHAEELAGKEATFKTKVNEIKFKEVPELTDEIANELDAEANTVDEYKENLRKRLAEQKATDAENVEKEEAITKATDNTTIDIPEAMVNTELDRMVSEFAQRIQQQ-GLDLQTYFQISGQDETQLREQMKDDAE---QRVKTNLTLTAIAEAEKIEATDEDIDKELEKMSKQFNISVEDIKNTLGNTDIIKNDVRIQKVIDLL 420          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_STAA8 (Trigger factor OS=Staphylococcus aureus (strain NCTC 8325) GN=tig PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.326e-14
Identity = 59/238 (24.79%), Postives = 114/238 (47.90%), Query Frame = 3
Query:   87 FDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYG--AQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVEN-------SIAELKQQKPEYD---EGSRREQVIDIL 761
            +D E G    +PGF + + G++  E K   + FPE +  E L G +A F  +  E+ ++++P+L D +A +L     T+++ KE L ++  E + T  +       + +      IDIP+++   +  ++    AQ +Q Q G+ L      +      ++E +++  E     +K NL +  I + E ++ + ED+ KE+E        S+ ++K      D      R ++VID+L
Sbjct:  187 YDLEIGSGSFIPGFEEQLEGMKVDEEKDVVVTFPEEYHAEELAGKEATFKTKVNEIKFKEVPELTDEIANELDAEANTVDEYKENLRKRLAEQKATDAENVEKEEAITKATDNTTIDIPEAMVNTELDRMVSEFAQRIQQQ-GLDLQTYFQISGQDETQLREQMKDDAE---QRVKTNLTLTAIAEAEKIEATDEDIDKELEKMSKQFNISVEDIKNTLGNTDIIKNDVRIQKVIDLL 420          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_STAA3 (Trigger factor OS=Staphylococcus aureus (strain USA300) GN=tig PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.326e-14
Identity = 59/238 (24.79%), Postives = 114/238 (47.90%), Query Frame = 3
Query:   87 FDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYG--AQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVEN-------SIAELKQQKPEYD---EGSRREQVIDIL 761
            +D E G    +PGF + + G++  E K   + FPE +  E L G +A F  +  E+ ++++P+L D +A +L     T+++ KE L ++  E + T  +       + +      IDIP+++   +  ++    AQ +Q Q G+ L      +      ++E +++  E     +K NL +  I + E ++ + ED+ KE+E        S+ ++K      D      R ++VID+L
Sbjct:  187 YDLEIGSGSFIPGFEEQLEGMKVDEEKDVVVTFPEEYHAEELAGKEATFKTKVNEIKFKEVPELTDEIANELDAEANTVDEYKENLRKRLAEQKATDAENVEKEEAITKATDNTTIDIPEAMVNTELDRMVSEFAQRIQQQ-GLDLQTYFQISGQDETQLREQMKDDAE---QRVKTNLTLTAIAEAEKIEATDEDIDKELEKMSKQFNISVEDIKNTLGNTDIIKNDVRIQKVIDLL 420          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_STAA2 (Trigger factor OS=Staphylococcus aureus (strain JH1) GN=tig PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.326e-14
Identity = 59/238 (24.79%), Postives = 114/238 (47.90%), Query Frame = 3
Query:   87 FDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYG--AQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVEN-------SIAELKQQKPEYD---EGSRREQVIDIL 761
            +D E G    +PGF + + G++  E K   + FPE +  E L G +A F  +  E+ ++++P+L D +A +L     T+++ KE L ++  E + T  +       + +      IDIP+++   +  ++    AQ +Q Q G+ L      +      ++E +++  E     +K NL +  I + E ++ + ED+ KE+E        S+ ++K      D      R ++VID+L
Sbjct:  187 YDLEIGSGSFIPGFEEQLEGMKVDEEKDVVVTFPEEYHAEELAGKEATFKTKVNEIKFKEVPELTDEIANELDAEANTVDEYKENLRKRLAEQKATDAENVEKEEAITKATDNTTIDIPEAMVNTELDRMVSEFAQRIQQQ-GLDLQTYFQISGQDETQLREQMKDDAE---QRVKTNLTLTAIAEAEKIEATDEDIDKELEKMSKQFNISVEDIKNTLGNTDIIKNDVRIQKVIDLL 420          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_STAA1 (Trigger factor OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=tig PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.326e-14
Identity = 59/238 (24.79%), Postives = 114/238 (47.90%), Query Frame = 3
Query:   87 FDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYG--AQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVEN-------SIAELKQQKPEYD---EGSRREQVIDIL 761
            +D E G    +PGF + + G++  E K   + FPE +  E L G +A F  +  E+ ++++P+L D +A +L     T+++ KE L ++  E + T  +       + +      IDIP+++   +  ++    AQ +Q Q G+ L      +      ++E +++  E     +K NL +  I + E ++ + ED+ KE+E        S+ ++K      D      R ++VID+L
Sbjct:  187 YDLEIGSGSFIPGFEEQLEGMKVDEEKDVVVTFPEEYHAEELAGKEATFKTKVNEIKFKEVPELTDEIANELDAEANTVDEYKENLRKRLAEQKATDAENVEKEEAITKATDNTTIDIPEAMVNTELDRMVSEFAQRIQQQ-GLDLQTYFQISGQDETQLREQMKDDAE---QRVKTNLTLTAIAEAEKIEATDEDIDKELEKMSKQFNISVEDIKNTLGNTDIIKNDVRIQKVIDLL 420          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_OCEIH (Trigger factor OS=Oceanobacillus iheyensis GN=tig PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.326e-14
Identity = 68/239 (28.45%), Postives = 119/239 (49.79%), Query Frame = 3
Query:   75 KGFHFDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKM----VEIDIPQSLFEEQGRQLYG--AQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPEYDEGSRREQVIDILEGS 770
            KG +   E G  + +PGF + + G + GE     + FPE +  E L G +A F V+  E+  ++LP+LDD  A  +     +++++K    +K R   +T K Q  +N   ++L +     VE+DIP+++ + +  Q+     Q LQMQ GM L   ++ A  S +      E   E+    +K NL +  I + E ++ S ED+        AEL++    Y  G+  +Q++ +L G+
Sbjct:  183 KGENHSLEIGSGQFIPGFEEQLIGKKAGEETEVTVTFPEEYHAEDLAGKEAVFNVKINEVKAKELPELDDEFAKDVDEEVESLDELK----KKKRNELETNKKQEVENKKREELIQKASDNVEVDIPEAMVDTEVNQMVREFEQQLQMQ-GMTL---EMYAQFSGQDEDALKEQMREDAAKRVKTNLTLEAISEAEGIKPSEEDIK-------AELEKMASMY--GAEVDQLVQMLGGN 404          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_CLOTE (Trigger factor OS=Clostridium tetani GN=tig PE=3 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 3.326e-14
Identity = 50/210 (23.81%), Postives = 103/210 (49.05%), Query Frame = 3
Query:   48 VQNIPDAETKGFHFDTEDGDKV-LPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFE-EQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLV 671
            V  +P    +G+ +  E G    +  F D + G ++GE K  ++ FPE +  E L G +A+F V  +E+  ++LP +DD    K +    T++++KE +  K +E          +  +++   +  ++DIP+ + E E    L   ++     G+ L        S+ + V+E+++   E  T  +K +L + ++ K E L+ + E+++
Sbjct:  175 VDEVPFEGGEGYDYSLEIGSGTFIDNFEDQLIGAKKGEEKEVKVKFPEEYGSEELNGKEAKFQVTIKEIKVKELPAIDDEFV-KEVSEFDTLDELKEDIKAKIKEGNDKRAKAEYEETVINLACENAKVDIPEVMVENEINNMLKDLEMKLRYQGIDLETYYQYTNSTEEKVREYMK---EAATKRVKTDLVLAEVAKAEKLEATDEEIM 380          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_BACP2 (Trigger factor OS=Bacillus pumilus (strain SAFR-032) GN=tig PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.326e-14
Identity = 53/191 (27.75%), Postives = 96/191 (50.26%), Query Frame = 3
Query:  114 LPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYG--AQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEV 680
            +PGF + + G++ G  K   + FPE +  E L G  A F V+  E+  ++LP LDD  A  +     T+ ++ E   ++  E ++   +      ++++  +  E+DIPQ++ + +  ++     Q LQMQ GM L      +     A+KE ++   E+    +K NL +  I   ENLQ S E++ +E+
Sbjct:  197 IPGFEEQLVGLEAGAEKDVEVTFPEEYHAEDLAGKPAVFKVKIHEIKAKELPALDDEFAKDVDEEVETLAELTEKTKKRLEEAKENEAEGKLREELVEKASENAEVDIPQAMVDTELDRMMKEFEQRLQMQ-GMNLELYFQFSGQDEDALKEQMK---EDAAKRVKSNLTLEAIAAAENLQVSDEEVEEEL 383          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_BACCN (Trigger factor OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=tig PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.326e-14
Identity = 50/191 (26.18%), Postives = 94/191 (49.21%), Query Frame = 3
Query:  114 LPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFE-EQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVE 683
            +PGF + + G++ GE+K   + FPE +  E L G  A F V   E+  ++LP+L+D  A  +     T++++K  L     E ++   +    + ++++     EIDIP+++ E E  R +   +    Q GM L   +L    +     +  E   E+    ++ NL +  I K EN++ + E++  E+E
Sbjct:  197 IPGFEEQLIGLKAGESKDVEVTFPEEYHAEELAGKPATFKVTVHEIKAKELPELNDEFAKDVNEEVATLDELKAKLRTDLEEGKKHEAEHKVRDEVVEKAAANAEIDIPEAMIETELDRMVREFEQRLSQQGMNL---ELYYQFTGTDADKLKEQMKEDAQKRVRINLVLEAIIKAENIEVAEEEVNAEIE 384          
The following BLAST results are available for this feature:
BLAST of EY659440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
TIG_STAAC3.326e-1424.79Trigger factor OS=Staphylococcus aureus (strain CO... [more]
TIG_STAA93.326e-1424.79Trigger factor OS=Staphylococcus aureus (strain JH... [more]
TIG_STAA83.326e-1424.79Trigger factor OS=Staphylococcus aureus (strain NC... [more]
TIG_STAA33.326e-1424.79Trigger factor OS=Staphylococcus aureus (strain US... [more]
TIG_STAA23.326e-1424.79Trigger factor OS=Staphylococcus aureus (strain JH... [more]
TIG_STAA13.326e-1424.79Trigger factor OS=Staphylococcus aureus (strain Mu... [more]
TIG_OCEIH3.326e-1428.45Trigger factor OS=Oceanobacillus iheyensis GN=tig ... [more]
TIG_CLOTE3.326e-1423.81Trigger factor OS=Clostridium tetani GN=tig PE=3 S... [more]
TIG_BACP23.326e-1427.75Trigger factor OS=Bacillus pumilus (strain SAFR-03... [more]
TIG_BACCN3.326e-1426.18Trigger factor OS=Bacillus cereus subsp. cytotoxis... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-B07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659440 ID=EY659440; Name=EY659440; organism=Citrus sinensis; type=EST; length=920bp
CAATCGTTGATATATCAGCAACAACAATAGATGCAGATGAATCAAATGTT
CAAAATATTCCAGATGCAGAGACCAAAGGATTTCATTTTGATACAGAAGA
TGGGGACAAAGTTCTTCCAGGTTTTCTTGATTCTATAAGTGGAATTCAAC
GAGGTGAAACAAAGTCCTTTCGACTCGCATTCCCTGAATCCTGGAGACAA
GAACATCTTCGTGGTGTTCAAGCTCAATTTACTGTTGAATGCAGAGAACT
GTTTTATAGAGATTTGCCGAAATTGGATGACTCCCTTGCTGGAAAGCTTC
TTCCTGGATGCACTACCATAGAGCAGGTCAAGGAAACATTATTGCAGAAG
TGTCGAGAAGTGGAGCAAACTGCAAAAGACCAGGCGACTGATAATGCAAT
TCTAGACCAGCTTTACAAGATGGTGGAAATTGATATTCCTCAATCCTTGT
TTGAGGAACAAGGAAGGCAGCTTTATGGGGCTCAACTTTTGCAGATGCAG
GCAGGTATGAAATTGAACGAACAGCAGTTGGCTGCTCTATCAAGCCCAAA
AGCAGTAAAAGAGTTTCTGGAAAACCAGACGGAGAACATAACCAATGTGA
TAAAACAGAATCTAGCCGTCGGAGATATCTTTAAACGTGAAAATTTGCAG
TTTTCGACTGAAGACTTAGTCAAAGAAGTTGAAAACTCCATTGCTGAATT
AAAACAACAGAAACCAGAATATGATGAGGGATCGCGTAGAGAACAGGTGA
TAGACATACTCGAAGGGAGCTAAAGTCTCGAATGGGTGAGAGACATGCAG
AAAATCAGTNCANACCCAGATGAGAACATACCCCATATATGAAAAGGAGC
TAGGAGTTGCAGGAGCCGGATTAAAATTGCATTGCAGAGCATTGGTGCTC
TGCAAATTTTGATTGAAAAA
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