EY659440

Overview
NameEY659440
Unique NameEY659440
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length920
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_PROM5 (Trigger factor OS=Prochlorococcus marinus (strain MIT 9515) GN=tig PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.344e-14
Identity = 48/230 (20.87%), Postives = 117/230 (50.87%), Query Frame = 3
Query:  105 DKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPEYDEGSRREQVIDILEGS*SLEWVRD 794
            +K++PGF++ I G++  + K+  L FP+ +  E  RG +A F V  ++L  ++LP+L+D  A K      +++++K+ + ++ +E     +      A++D L K ++ +IP+++ + + R      + Q           + +  +P+ VK   E+        +++NLA+  + + EN+    +++ ++++    E+ + + + D    +E V++ L     + W+ +
Sbjct:  207 NKMIPGFVEGIVGMKIDDNKTLNLKFPDDYSHEESRGKEAIFEVSLKDLKEKELPELNDDFA-KQSGNKDSLKELKKDIEKQLKENFDNTQKNIKIEALMDALSKELDAEIPKAMIDIEVRN----NIEQTAQRFAQQGMDIKSTFTPELVKTLAESTRPQAEKNVQRNLALKALSESENITVEDKEINQKMKEYDDEISKSQKQIDIQKLKEVVLNDLLKEKLITWLEE 431          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_LACF3 (Trigger factor OS=Lactobacillus fermentum (strain IFO 3956 / LMG 18251) GN=tig PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.344e-14
Identity = 60/224 (26.79%), Postives = 110/224 (49.11%), Query Frame = 3
Query:  114 LPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEI-DIPQSLFEEQGRQLYGAQLLQMQAGMK---LNEQ---QLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPEYDEGSRREQVIDILE 764
            +PGF D + G + GE     + FPE +  + L G  A F V+  E+  + LP+LDD  A  +     T+ ++K+ + ++ ++ ++ A   A ++A ++      E  +IPQ++ ++   +    QL Q  AGM+   +N Q   Q+   +     K+F ++  +     +K NL +  + K  NL  + ED    V+N IA+L +Q    +E   +    D+LE
Sbjct:  198 IPGFEDQLVGHKAGEDVDVNVTFPEDYHAKDLAGKDALFKVKIHEVKEKQLPELDDEFAKDVDEDVETLAELKDKVKKQLQDQKEAAAKAAIEDAAIEAAVANAETEEIPQAMLDDDTNR----QLQQYLAGMQQQGINPQMYFQITNTTEDDLRKQFADDAAKR----VKTNLVLEAVVKDANLNATDED----VQNEIADLAKQYGMDEEAVSKALTRDMLE 409          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_STRU0 (Trigger factor OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=tig PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.674e-14
Identity = 55/211 (26.07%), Postives = 103/211 (48.82%), Query Frame = 3
Query:   75 KGFHFDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEI-DIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNV-IKQNLAVGDIFKRENLQFSTEDLVKEVENSIAE 698
            KG +F  E G  + +PGF D + G + GETK+  + FPE ++ E L G  A F     E+  +++P LDD LA  +     T++++K    ++    ++ A D A + A ++      EI ++P+ +  ++  +     +  MQ    ++ +    L+     +E L  Q E+  +  +K NL +  I K E  + + E++ KE+ +   E
Sbjct:  183 KGENFSLELGSGQFIPGFEDQLVGTKAGETKNVEVTFPEDYQAEDLAGKAATFVTTVHEVKSKEVPALDDELAKDIDEEVETLDELKAKYRKELEAAKEIAFDDAVEGAAIELAVANAEIVELPEEMVHDEVHRAMNEFMGNMQR-QGISPEMYFQLTG--TTQEDLHKQYESEADKRVKTNLVIEAIAKAEGFEATDEEIEKEINDLATE 390          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_PROM2 (Trigger factor OS=Prochlorococcus marinus (strain MIT 9215) GN=tig PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.674e-14
Identity = 55/208 (26.44%), Postives = 115/208 (55.29%), Query Frame = 3
Query:  105 DKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCRE-VEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALS--SPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDL---VKEVENSIAELKQQ 710
            +K++PGF++ I  ++ G+TK+  L FPE +  E  RG +A F V  ++L  ++LP+L+D  A K      +++++K+ + ++ ++  E+T KD   + A+LD L   +  +IP+S+ + + R          Q   +  +Q L   S  +P+ VK   E+        +++NLA+  + + EN++   +++   +K+ E++I++  +Q
Sbjct:  207 NKMIPGFVEGIVKMKIGDTKTLNLKFPEDYSHEDSRGKEAIFEVNLKDLKEKELPELNDDFA-KQSGNKESLKELKKDIEKQLKDNFEKTQKDIKIE-ALLDALTNELVAEIPKSMIDIEVRNNI------EQTAQRFAQQGLDVKSTFTPELVKSLAESTRPQAEKNVQRNLALKALAETENIKVEKDEIDLKMKDYEDAISQSSKQ 406          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_LISW6 (Trigger factor OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=tig PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.674e-14
Identity = 52/197 (26.40%), Postives = 100/197 (50.76%), Query Frame = 3
Query:  114 LPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQL--YGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAE 698
            +PGF + + G++ G+     L FPE +  E L G    F V+  E+  +++P LDD LA  +     T++++KE + ++ +E ++ +  QA    ++ +  +  E+DIP ++   +   L  + AQ LQ Q G+           + +A+   +E   E     +K NL +  I + EN++  TE+ + E  +++AE
Sbjct:  197 IPGFEEKLVGLKAGDEADIELTFPEEYHAEDLAGQPVVFKVKLHEIKTKEVPALDDELAKDIDEEVETLDELKEKISKRLQEAKEESVAQAKQEEVIAKAVENAEVDIPHAMVHHEADHLMNHFAQDLQAQ-GLTPELYYQFTGQTEEAMHAQMETDAE---KRVKMNLVLEAIAEAENIE-PTEEAIDEEISTLAE 388          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_LISMO (Trigger factor OS=Listeria monocytogenes GN=tig PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.674e-14
Identity = 52/197 (26.40%), Postives = 100/197 (50.76%), Query Frame = 3
Query:  114 LPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQL--YGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAE 698
            +PGF + + G++ G+     L FPE +  E L G    F V+  E+  +++P LDD LA  +     T++++KE + ++ +E ++ +  QA    ++ +  +  E+DIP ++   +   L  + AQ LQ Q G+           + +A+   +E   E     +K NL +  I + EN++  TE+ + E  +++AE
Sbjct:  197 IPGFEEKLVGLKAGDEADIELTFPEEYHAEDLAGQPVVFKVKLHEIKTKEVPALDDELAKDIDEEVETLDELKEKISKRLQEAKEESVAQAKQEEVIAKAVENAEVDIPHAMVHHEADHLMNHFAQDLQAQ-GLTPELYYQFTGQTEEAMHAQMEKDAE---KRVKMNLVLEAIAEAENIE-PTEEAIDEEISTLAE 388          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_LISMH (Trigger factor OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=tig PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.674e-14
Identity = 52/197 (26.40%), Postives = 100/197 (50.76%), Query Frame = 3
Query:  114 LPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQL--YGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAE 698
            +PGF + + G++ G+     L FPE +  E L G    F V+  E+  +++P LDD LA  +     T++++KE + ++ +E ++ +  QA    ++ +  +  E+DIP ++   +   L  + AQ LQ Q G+           + +A+   +E   E     +K NL +  I + EN++  TE+ + E  +++AE
Sbjct:  197 IPGFEEKLVGLKAGDEADIELTFPEEYHAEDLAGQPVVFKVKLHEIKTKEVPALDDELAKDIDEEVETLDELKEKISKRLQEAKEESVAQAKQEEVIAKAVENAEVDIPHAMVHHEADHLMNHFAQDLQAQ-GLTPELYYQFTGQTEEAMHAQMEKDAE---KRVKMNLVLEAIAEAENIE-PTEEAIDEEISTLAE 388          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_LISMF (Trigger factor OS=Listeria monocytogenes serotype 4b (strain F2365) GN=tig PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.674e-14
Identity = 52/197 (26.40%), Postives = 100/197 (50.76%), Query Frame = 3
Query:  114 LPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQL--YGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAE 698
            +PGF + + G++ G+     L FPE +  E L G    F V+  E+  +++P LDD LA  +     T++++KE + ++ +E ++ +  QA    ++ +  +  E+DIP ++   +   L  + AQ LQ Q G+           + +A+   +E   E     +K NL +  I + EN++  TE+ + E  +++AE
Sbjct:  197 IPGFEEKLVGLKAGDEADIELTFPEEYHAEDLAGQPVVFKVKLHEIKTKEVPALDDELAKDIDEEVETLDELKEKISKRLQEAKEESVAQAKQEEVIAKAVENAEVDIPHAMVHHEADHLMNHFAQDLQAQ-GLTPELYYQFTGQTEEAMHAQMEKDAE---KRVKMNLVLEAIAEAENIE-PTEEAIDEEISTLAE 388          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_LISMC (Trigger factor OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=tig PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.674e-14
Identity = 52/197 (26.40%), Postives = 100/197 (50.76%), Query Frame = 3
Query:  114 LPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQL--YGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAE 698
            +PGF + + G++ G+     L FPE +  E L G    F V+  E+  +++P LDD LA  +     T++++KE + ++ +E ++ +  QA    ++ +  +  E+DIP ++   +   L  + AQ LQ Q G+           + +A+   +E   E     +K NL +  I + EN++  TE+ + E  +++AE
Sbjct:  197 IPGFEEKLVGLKAGDEADIELTFPEEYHAEDLAGQPVVFKVKLHEIKTKEVPALDDELAKDIDEEVETLDELKEKISKRLQEAKEESVAQAKQEEVIAKAVENAEVDIPHAMVHHEADHLMNHFAQDLQAQ-GLTPELYYQFTGQTEEAMHAQMEKDAE---KRVKMNLVLEAIAEAENIE-PTEEAIDEEISTLAE 388          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_LISIN (Trigger factor OS=Listeria innocua GN=tig PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.674e-14
Identity = 52/197 (26.40%), Postives = 100/197 (50.76%), Query Frame = 3
Query:  114 LPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQL--YGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAE 698
            +PGF + + G++ G+     L FPE +  E L G    F V+  E+  +++P LDD LA  +     T++++KE + ++ +E ++ +  QA    ++ +  +  E+DIP ++   +   L  + AQ LQ Q G+           + +A+   +E   E     +K NL +  I + EN++  TE+ + E  +++AE
Sbjct:  197 IPGFEEKLVGLKAGDEADIELTFPEEYHAEDLAGQPVVFKVKLHEIKTKEVPALDDELAKDIDEEVETLDELKEKISKRLQEAKEDSVAQAKQEEVIAKAVENAEVDIPHAMVHHEADHLMNHFAQDLQAQ-GLTPELYYQFTGQTEEAMHAQMEKDAE---KRVKMNLVLEAIAEAENIE-PTEEAIDEEISTLAE 388          
The following BLAST results are available for this feature:
BLAST of EY659440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
TIG_PROM54.344e-1420.87Trigger factor OS=Prochlorococcus marinus (strain ... [more]
TIG_LACF34.344e-1426.79Trigger factor OS=Lactobacillus fermentum (strain ... [more]
TIG_STRU05.674e-1426.07Trigger factor OS=Streptococcus uberis (strain ATC... [more]
TIG_PROM25.674e-1426.44Trigger factor OS=Prochlorococcus marinus (strain ... [more]
TIG_LISW65.674e-1426.40Trigger factor OS=Listeria welshimeri serovar 6b (... [more]
TIG_LISMO5.674e-1426.40Trigger factor OS=Listeria monocytogenes GN=tig PE... [more]
TIG_LISMH5.674e-1426.40Trigger factor OS=Listeria monocytogenes serotype ... [more]
TIG_LISMF5.674e-1426.40Trigger factor OS=Listeria monocytogenes serotype ... [more]
TIG_LISMC5.674e-1426.40Trigger factor OS=Listeria monocytogenes serotype ... [more]
TIG_LISIN5.674e-1426.40Trigger factor OS=Listeria innocua GN=tig PE=3 SV=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-B07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659440 ID=EY659440; Name=EY659440; organism=Citrus sinensis; type=EST; length=920bp
CAATCGTTGATATATCAGCAACAACAATAGATGCAGATGAATCAAATGTT
CAAAATATTCCAGATGCAGAGACCAAAGGATTTCATTTTGATACAGAAGA
TGGGGACAAAGTTCTTCCAGGTTTTCTTGATTCTATAAGTGGAATTCAAC
GAGGTGAAACAAAGTCCTTTCGACTCGCATTCCCTGAATCCTGGAGACAA
GAACATCTTCGTGGTGTTCAAGCTCAATTTACTGTTGAATGCAGAGAACT
GTTTTATAGAGATTTGCCGAAATTGGATGACTCCCTTGCTGGAAAGCTTC
TTCCTGGATGCACTACCATAGAGCAGGTCAAGGAAACATTATTGCAGAAG
TGTCGAGAAGTGGAGCAAACTGCAAAAGACCAGGCGACTGATAATGCAAT
TCTAGACCAGCTTTACAAGATGGTGGAAATTGATATTCCTCAATCCTTGT
TTGAGGAACAAGGAAGGCAGCTTTATGGGGCTCAACTTTTGCAGATGCAG
GCAGGTATGAAATTGAACGAACAGCAGTTGGCTGCTCTATCAAGCCCAAA
AGCAGTAAAAGAGTTTCTGGAAAACCAGACGGAGAACATAACCAATGTGA
TAAAACAGAATCTAGCCGTCGGAGATATCTTTAAACGTGAAAATTTGCAG
TTTTCGACTGAAGACTTAGTCAAAGAAGTTGAAAACTCCATTGCTGAATT
AAAACAACAGAAACCAGAATATGATGAGGGATCGCGTAGAGAACAGGTGA
TAGACATACTCGAAGGGAGCTAAAGTCTCGAATGGGTGAGAGACATGCAG
AAAATCAGTNCANACCCAGATGAGAACATACCCCATATATGAAAAGGAGC
TAGGAGTTGCAGGAGCCGGATTAAAATTGCATTGCAGAGCATTGGTGCTC
TGCAAATTTTGATTGAAAAA
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