EY659440

Overview
NameEY659440
Unique NameEY659440
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length920
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_PROMP (Trigger factor OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=tig PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.410e-14
Identity = 48/205 (23.41%), Postives = 107/205 (52.20%), Query Frame = 3
Query:  105 DKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDL---VKEVENSIAELKQQ 710
            +K++PGF++ I G++  + K+  L FPE +  E  RG +A F +  ++L  ++LP+L+D  A K      +++++K+ + ++ +E     +      A++D L K ++ +IP+++ + + R      + Q           + +  +P+ VK   E+        +++NLA+  + +RE +    E++   +KE E+ I++  +Q
Sbjct:  207 NKMIPGFVEGIVGMKIDDNKTLTLRFPEDYSHEDSRGKEAIFDISLKDLKEKELPELNDDFA-KQSGNKDSLKELKKDIEKQLKENFDNTQKNIKVEALMDALSKELDAEIPKAMIDIEVRN----NIEQTAQRFAQQGMDIKSTFTPELVKSLAESTRPQAEKNVQRNLALKALSEREKITVDNEEIDQKMKEYEDEISKSPKQ 406          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_ANOFW (Trigger factor OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=tig PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.410e-14
Identity = 57/228 (25.00%), Postives = 111/228 (48.68%), Query Frame = 3
Query:  114 LPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYG--AQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVEN-------SIAELKQQKPEYD---EGSRREQVIDIL 761
            +PGF + + G+  GE K   + FPE +  E L G  A F ++  E+  + LP LDD  A  +     T++ +KE + ++  + ++   + A  +A++ +  +  ++DIP+ + + +  ++     Q LQMQ G+ L+     +     A++E ++ + E    V    L +  I K EN+  + E++ KE++        S+ +LK+     D   E  +  + ID L
Sbjct:  197 IPGFEEQLIGMAAGEEKDIEVTFPEEYHAEQLAGKPAVFKIKLHEIKTKQLPALDDEFAKDVDEEVETLDALKEKIKERLTKEKKEEAEAALRDAVVQKATENAQMDIPEVMVKNETDRMIREFEQRLQMQ-GLNLDLYYQFSGQDEAALREQMKEEAEKRVRV---TLTLEAIVKAENIDVTEEEVEKELQEMASLYNLSVDKLKELLGTLDGLKEDLKMRKAIDFL 420          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_SYNY3 (Trigger factor OS=Synechocystis sp. (strain PCC 6803) GN=tig PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.678e-14
Identity = 73/271 (26.94%), Postives = 132/271 (48.71%), Query Frame = 3
Query:    3 IVDISATTIDADESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDN---AILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQ-KPEYDEGSRREQVIDILEGS*SLEWVRDMQK 803
            IVD +A  +  D    + I + +   F    EDG + + G +D I G+   ETK   + FPE +  E + G    F ++ +E+ +R+LP+LDD  A  +    +  E + E      ++ ++ AK +  DN   AI  +L ++   D+P+++ +++  +L     ++++  M L+  QL              ++ E I N +K +L +G I K E +Q  TE    EV+    EL+Q+ K E  + SR   +++ +E S +   V D+ K
Sbjct:  175 IVDYAAFQVAEDGQAGEAIAEVKGSDFEVTLEDG-RFVAGIVDGIVGMAVDETKLIPVTFPEDYPLEAVAGEDVLFEIKLKEIKFRELPELDDDFAEDV----SEFETMAELKADLEKQFQEQAKQRTDDNIKAAIKKKLGELFTGDLPETMIKQECDRLVAQTAMELER-MGLDVSQLFRQGDDMLQTLKDNSRPEAIAN-LKTDLMIGAIAKEEKIQ-PTE---AEVKERCDELRQEFKGEKIDESR---LVNFVESSLTESKVLDLLK 431          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_STRSV (Trigger factor OS=Streptococcus sanguinis (strain SK36) GN=tig PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.678e-14
Identity = 59/222 (26.58%), Postives = 103/222 (46.40%), Query Frame = 3
Query:   78 GFHFDTEDGD---------KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEI-DIPQSLFEEQGRQLYGAQLLQMQ-AGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQ 710
            G  FD   GD         + +PGF + + G   GET    + FPE ++ E L G +A+F     E+  +++P LDD LA  +     T++++KE   ++  E ++TA   A + A +DQ     EI D+P  +  E+  +     L  MQ  G+  +       ++ + + +  E   E+ T   K NL V  + K E  + S E++  EV +  ++   +
Sbjct:  176 GVEFDGGKGDNFSLGLGSGQFIPGFEEQLVGHSAGETVDVVVTFPEDYQAEDLAGKEAKFVTTIHEVKEKEVPALDDELAKDIDEEVETLDELKEKYRKELSEAKETAYKDAVEAAAIDQAVANAEIVDLPAEMVHEEVHRAVNEFLGNMQRQGISPDMYFQITGTTQEDLHKQYEADAESRT---KTNLVVEAVAKAEGFEASAEEIEAEVTSLASDYNME 394          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_STRPM (Trigger factor OS=Streptococcus pyogenes serotype M28 GN=tig PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.678e-14
Identity = 55/211 (26.07%), Postives = 101/211 (47.87%), Query Frame = 3
Query:   75 KGFHFDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEI-DIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQ-TENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAE 698
            KG +F  E G  + +PGF D + G + G+     + FPES++ E L G  A+F     E+  +++P+LDD LA  +     T+E +K    ++    ++TA D A + A ++      EI D+P+ +  E+  +     +  MQ    ++ +    L+     +E L NQ +      +K NL +  I K E  + +  ++ +E+ +   E
Sbjct:  212 KGDNFSLELGSGQFIPGFEDQLVGAKAGDEVEVNVTFPESYQAEDLAGKAAKFMTTIHEVKTKEVPELDDELAKDIDEDVDTLEDLKVKYRKELEAAQETAYDDAVEGAAIELAVANAEIVDLPEEMIHEEVNRSVNEFMGNMQR-QGISPEMYFQLTG--TTQEDLHNQYSAEADKRVKTNLVIEAIAKAEGFEATDSEIEQEINDLATE 419          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_STRPG (Trigger factor OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=tig PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.678e-14
Identity = 55/211 (26.07%), Postives = 101/211 (47.87%), Query Frame = 3
Query:   75 KGFHFDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEI-DIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQ-TENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAE 698
            KG +F  E G  + +PGF D + G + G+     + FPES++ E L G  A+F     E+  +++P+LDD LA  +     T+E +K    ++    ++TA D A + A ++      EI D+P+ +  E+  +     +  MQ    ++ +    L+     +E L NQ +      +K NL +  I K E  + +  ++ +E+ +   E
Sbjct:  183 KGDNFSLELGSGQFIPGFEDQLVGAKAGDEVEVNVTFPESYQAEDLAGKAAKFMTTIHEVKTKEVPELDDELAKDIDEDVDTLEDLKVKYRKELEAAQETAYDDAVEGAAIELAVANAEIVDLPEEMIHEEVNRSVNEFMGNMQR-QGISPEMYFQLTG--TTQEDLHNQYSAEADKRVKTNLVIEAIAKAEGFEATDSEIEQEINDLATE 390          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_STRPF (Trigger factor OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=tig PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.678e-14
Identity = 55/211 (26.07%), Postives = 101/211 (47.87%), Query Frame = 3
Query:   75 KGFHFDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEI-DIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQ-TENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAE 698
            KG +F  E G  + +PGF D + G + G+     + FPES++ E L G  A+F     E+  +++P+LDD LA  +     T+E +K    ++    ++TA D A + A ++      EI D+P+ +  E+  +     +  MQ    ++ +    L+     +E L NQ +      +K NL +  I K E  + +  ++ +E+ +   E
Sbjct:  212 KGDNFSLELGSGQFIPGFEDQLVGAKAGDEVEVNVTFPESYQAEDLAGKAAKFMTTIHEVKTKEVPELDDELAKDIDEDVDTLEDLKVKYRKELEAAQETAYDDAVEGAAIELAVANAEIVDLPEEMIHEEVNRSVNEFMGNMQR-QGISPEMYFQLTG--TTQEDLHNQYSAEADKRVKTNLVIEAIAKAEGFEATDSEIEQEINDLATE 419          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_STRPD (Trigger factor OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=tig PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.678e-14
Identity = 55/211 (26.07%), Postives = 101/211 (47.87%), Query Frame = 3
Query:   75 KGFHFDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEI-DIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQ-TENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAE 698
            KG +F  E G  + +PGF D + G + G+     + FPES++ E L G  A+F     E+  +++P+LDD LA  +     T+E +K    ++    ++TA D A + A ++      EI D+P+ +  E+  +     +  MQ    ++ +    L+     +E L NQ +      +K NL +  I K E  + +  ++ +E+ +   E
Sbjct:  212 KGDNFSLELGSGQFIPGFEDQLVGAKAGDEVEVNVTFPESYQAEDLAGKAAKFMTTIHEVKTKEVPELDDELAKDIDEDVDTLEDLKVKYRKELEAAQETAYDDAVEGAAIELAVANAEIVDLPEEMIHEEVNRSVNEFMGNMQR-QGISPEMYFQLTG--TTQEDLHNQYSAEADKRVKTNLVIEAIAKAEGFEATDSEIEQEINDLATE 419          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_STRP8 (Trigger factor OS=Streptococcus pyogenes serotype M18 GN=tig PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.678e-14
Identity = 55/211 (26.07%), Postives = 101/211 (47.87%), Query Frame = 3
Query:   75 KGFHFDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEI-DIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQ-TENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAE 698
            KG +F  E G  + +PGF D + G + G+     + FPES++ E L G  A+F     E+  +++P+LDD LA  +     T+E +K    ++    ++TA D A + A ++      EI D+P+ +  E+  +     +  MQ    ++ +    L+     +E L NQ +      +K NL +  I K E  + +  ++ +E+ +   E
Sbjct:  183 KGDNFSLELGSGQFIPGFEDQLVGAKAGDEVEVNVTFPESYQAEDLAGKAAKFMTTIHEVKTKEVPELDDELAKDIDEDVDTLEDLKVKYRKELEAAQETAYDDAVEGAAIELAVANAEIVDLPEEMIHEEVNRSVNEFMGNMQR-QGISPEMYFQLTG--TTQEDLHNQYSAEADKRVKTNLVIEAIAKAEGFEATDSEIEQEINDLATE 390          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_STRP6 (Trigger factor OS=Streptococcus pyogenes serotype M6 GN=tig PE=3 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 9.678e-14
Identity = 55/211 (26.07%), Postives = 101/211 (47.87%), Query Frame = 3
Query:   75 KGFHFDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEI-DIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQ-TENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAE 698
            KG +F  E G  + +PGF D + G + G+     + FPES++ E L G  A+F     E+  +++P+LDD LA  +     T+E +K    ++    ++TA D A + A ++      EI D+P+ +  E+  +     +  MQ    ++ +    L+     +E L NQ +      +K NL +  I K E  + +  ++ +E+ +   E
Sbjct:  183 KGDNFSLELGSGQFIPGFEDQLVGAKAGDEVEVNVTFPESYQAEDLAGKAAKFMTTIHEVKTKEVPELDDELAKDIDEDVDTLEDLKVKYRKELEAAQETAYDDAVEGAAIELAVANAEIVDLPEEMIHEEVNRSVNEFMGNMQR-QGISPEMYFQLTG--TTQEDLHNQYSAEADKRVKTNLVIEAIAKAEGFEATDSEIEQEINDLATE 390          
The following BLAST results are available for this feature:
BLAST of EY659440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
TIG_PROMP7.410e-1423.41Trigger factor OS=Prochlorococcus marinus subsp. p... [more]
TIG_ANOFW7.410e-1425.00Trigger factor OS=Anoxybacillus flavithermus (stra... [more]
TIG_SYNY39.678e-1426.94Trigger factor OS=Synechocystis sp. (strain PCC 68... [more]
TIG_STRSV9.678e-1426.58Trigger factor OS=Streptococcus sanguinis (strain ... [more]
TIG_STRPM9.678e-1426.07Trigger factor OS=Streptococcus pyogenes serotype ... [more]
TIG_STRPG9.678e-1426.07Trigger factor OS=Streptococcus pyogenes serotype ... [more]
TIG_STRPF9.678e-1426.07Trigger factor OS=Streptococcus pyogenes serotype ... [more]
TIG_STRPD9.678e-1426.07Trigger factor OS=Streptococcus pyogenes serotype ... [more]
TIG_STRP89.678e-1426.07Trigger factor OS=Streptococcus pyogenes serotype ... [more]
TIG_STRP69.678e-1426.07Trigger factor OS=Streptococcus pyogenes serotype ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-B07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659440 ID=EY659440; Name=EY659440; organism=Citrus sinensis; type=EST; length=920bp
CAATCGTTGATATATCAGCAACAACAATAGATGCAGATGAATCAAATGTT
CAAAATATTCCAGATGCAGAGACCAAAGGATTTCATTTTGATACAGAAGA
TGGGGACAAAGTTCTTCCAGGTTTTCTTGATTCTATAAGTGGAATTCAAC
GAGGTGAAACAAAGTCCTTTCGACTCGCATTCCCTGAATCCTGGAGACAA
GAACATCTTCGTGGTGTTCAAGCTCAATTTACTGTTGAATGCAGAGAACT
GTTTTATAGAGATTTGCCGAAATTGGATGACTCCCTTGCTGGAAAGCTTC
TTCCTGGATGCACTACCATAGAGCAGGTCAAGGAAACATTATTGCAGAAG
TGTCGAGAAGTGGAGCAAACTGCAAAAGACCAGGCGACTGATAATGCAAT
TCTAGACCAGCTTTACAAGATGGTGGAAATTGATATTCCTCAATCCTTGT
TTGAGGAACAAGGAAGGCAGCTTTATGGGGCTCAACTTTTGCAGATGCAG
GCAGGTATGAAATTGAACGAACAGCAGTTGGCTGCTCTATCAAGCCCAAA
AGCAGTAAAAGAGTTTCTGGAAAACCAGACGGAGAACATAACCAATGTGA
TAAAACAGAATCTAGCCGTCGGAGATATCTTTAAACGTGAAAATTTGCAG
TTTTCGACTGAAGACTTAGTCAAAGAAGTTGAAAACTCCATTGCTGAATT
AAAACAACAGAAACCAGAATATGATGAGGGATCGCGTAGAGAACAGGTGA
TAGACATACTCGAAGGGAGCTAAAGTCTCGAATGGGTGAGAGACATGCAG
AAAATCAGTNCANACCCAGATGAGAACATACCCCATATATGAAAAGGAGC
TAGGAGTTGCAGGAGCCGGATTAAAATTGCATTGCAGAGCATTGGTGCTC
TGCAAATTTTGATTGAAAAA
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