EY659430

Overview
NameEY659430
Unique NameEY659430
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDH_YERPN (Malate dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=mdh PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.145e-50
Identity = 109/198 (55.05%), Postives = 135/198 (68.18%), Query Frame = 1 
Query:  184 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVKPPVAYSRE 771
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G+     AL G D+V+I AGV RKPGM R DLFN+NAGIVR L E IA+ CPNA + +I+NPVN+TV IAAEV KKAG YD  KL G+T LD +R+NTFVAE                H+GVT LPLLSQ+ P V+++ +
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPSGSDLSLYDIAPVTPGVAVDLSHIPTAVNIKGFSGEDATP-ALQGADIVLISAGVARKPGMDRSDLFNVNAGIVRNLVEQIARTCPNALIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGITTLDTIRSNTFVAELKGKQPQDIEVPVIGGHSGVTILPLLSQI-PGVSFTEQ 197
[Close]
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDH_YERPG (Malate dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=mdh PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.145e-50
Identity = 109/198 (55.05%), Postives = 135/198 (68.18%), Query Frame = 1 
Query:  184 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVKPPVAYSRE 771
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G+     AL G D+V+I AGV RKPGM R DLFN+NAGIVR L E IA+ CPNA + +I+NPVN+TV IAAEV KKAG YD  KL G+T LD +R+NTFVAE                H+GVT LPLLSQ+ P V+++ +
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPSGSDLSLYDIAPVTPGVAVDLSHIPTAVNIKGFSGEDATP-ALQGADIVLISAGVARKPGMDRSDLFNVNAGIVRNLVEQIARTCPNALIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGITTLDTIRSNTFVAELKGKQPQDIEVPVIGGHSGVTILPLLSQI-PGVSFTEQ 197
[Close]
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDH_YERPE (Malate dehydrogenase OS=Yersinia pestis GN=mdh PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.145e-50
Identity = 109/198 (55.05%), Postives = 135/198 (68.18%), Query Frame = 1 
Query:  184 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVKPPVAYSRE 771
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G+     AL G D+V+I AGV RKPGM R DLFN+NAGIVR L E IA+ CPNA + +I+NPVN+TV IAAEV KKAG YD  KL G+T LD +R+NTFVAE                H+GVT LPLLSQ+ P V+++ +
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPSGSDLSLYDIAPVTPGVAVDLSHIPTAVNIKGFSGEDATP-ALQGADIVLISAGVARKPGMDRSDLFNVNAGIVRNLVEQIARTCPNALIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGITTLDTIRSNTFVAELKGKQPQDIEVPVIGGHSGVTILPLLSQI-PGVSFTEQ 197
[Close]
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDH_YERPB (Malate dehydrogenase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=mdh PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.145e-50
Identity = 109/198 (55.05%), Postives = 135/198 (68.18%), Query Frame = 1 
Query:  184 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVKPPVAYSRE 771
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G+     AL G D+V+I AGV RKPGM R DLFN+NAGIVR L E IA+ CPNA + +I+NPVN+TV IAAEV KKAG YD  KL G+T LD +R+NTFVAE                H+GVT LPLLSQ+ P V+++ +
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPSGSDLSLYDIAPVTPGVAVDLSHIPTAVNIKGFSGEDATP-ALQGADIVLISAGVARKPGMDRSDLFNVNAGIVRNLVEQIARTCPNALIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGITTLDTIRSNTFVAELKGKQPQDIEVPVIGGHSGVTILPLLSQI-PGVSFTEQ 197
[Close]
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDH_YERPA (Malate dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=mdh PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.145e-50
Identity = 109/198 (55.05%), Postives = 135/198 (68.18%), Query Frame = 1 
Query:  184 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVKPPVAYSRE 771
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G+     AL G D+V+I AGV RKPGM R DLFN+NAGIVR L E IA+ CPNA + +I+NPVN+TV IAAEV KKAG YD  KL G+T LD +R+NTFVAE                H+GVT LPLLSQ+ P V+++ +
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPSGSDLSLYDIAPVTPGVAVDLSHIPTAVNIKGFSGEDATP-ALQGADIVLISAGVARKPGMDRSDLFNVNAGIVRNLVEQIARTCPNALIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGITTLDTIRSNTFVAELKGKQPQDIEVPVIGGHSGVTILPLLSQI-PGVSFTEQ 197
[Close]
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDH_YERP3 (Malate dehydrogenase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=mdh PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.145e-50
Identity = 109/198 (55.05%), Postives = 135/198 (68.18%), Query Frame = 1 
Query:  184 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVKPPVAYSRE 771
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G+     AL G D+V+I AGV RKPGM R DLFN+NAGIVR L E IA+ CPNA + +I+NPVN+TV IAAEV KKAG YD  KL G+T LD +R+NTFVAE                H+GVT LPLLSQ+ P V+++ +
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPSGSDLSLYDIAPVTPGVAVDLSHIPTAVNIKGFSGEDATP-ALQGADIVLISAGVARKPGMDRSDLFNVNAGIVRNLVEQIARTCPNALIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGITTLDTIRSNTFVAELKGKQPQDIEVPVIGGHSGVTILPLLSQI-PGVSFTEQ 197
[Close]
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDH_PASMU (Malate dehydrogenase OS=Pasteurella multocida GN=mdh PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.145e-50
Identity = 109/190 (57.37%), Postives = 132/190 (69.47%), Query Frame = 1 
Query:  184 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVK 747
            KVA+LGAAGGIGQ LA+L+K+  P  S L LYD+   TPGV AD+SH+ T   V+GF G+     AL G D+V+I AGV RKPGM R DLFNINAGIVR L E +A+ CP A V +I+NPVN+TV IAAEV KKAG YD +KL GVT LD++R+ TFV+E                H+GVT LPLLSQV+
Sbjct:    2 KVAVLGAAGGIGQALALLLKLQLPAGSELSLYDIAPVTPGVAADVSHIPTAVKVQGFAGEDPTP-ALQGADVVLISAGVARKPGMDRSDLFNINAGIVRNLIEKVAQVCPKACVGIITNPVNTTVAIAAEVLKKAGVYDKRKLFGVTTLDIIRSETFVSELKNLEPARTTVPVIGGHSGVTILPLLSQVQ 190
[Close]
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDH_HAES2 (Malate dehydrogenase OS=Haemophilus somnus (strain 2336) GN=mdh PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.145e-50
Identity = 111/193 (57.51%), Postives = 134/193 (69.43%), Query Frame = 1 
Query:  184 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQ---PQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVK 747
            K+A+LGAAGGIGQ LA+L+K+  P  S L LYD+   TPGV AD+SH+ T   ++GF G+   P LENA    D+V+I AGV RKPGM R DLFNINAGIV+ L E +AK CP A V +I+NPVN+TV IAAEV KKAG YD +KL GVT LDV+R+ TFVAE                H+GVT LPLLSQV+
Sbjct:    2 KIAVLGAAGGIGQALALLLKLQLPAGSELSLYDIAPVTPGVAADVSHIPTAVKIQGFAGEDPIPALENA----DVVLISAGVARKPGMDRSDLFNINAGIVKNLIEKVAKTCPKACVGIITNPVNTTVAIAAEVLKKAGVYDKRKLFGVTTLDVLRSETFVAELKGLNVSRIAVPVIGGHSGVTILPLLSQVQ 190
[Close]
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDH_HAES1 (Malate dehydrogenase OS=Haemophilus somnus (strain 129Pt) GN=mdh PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.145e-50
Identity = 111/193 (57.51%), Postives = 134/193 (69.43%), Query Frame = 1 
Query:  184 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQ---PQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVK 747
            K+A+LGAAGGIGQ LA+L+K+  P  S L LYD+   TPGV AD+SH+ T   ++GF G+   P LENA    D+V+I AGV RKPGM R DLFNINAGIV+ L E +AK CP A V +I+NPVN+TV IAAEV KKAG YD +KL GVT LDV+R+ TFVAE                H+GVT LPLLSQV+
Sbjct:    2 KIAVLGAAGGIGQALALLLKLQLPAGSELSLYDIAPVTPGVAADVSHIPTAVKIQGFAGEDPTPALENA----DVVLISAGVARKPGMDRSDLFNINAGIVKNLIEKVAKTCPKACVGIITNPVNTTVAIAAEVLKKAGVYDKRKLFGVTTLDVLRSETFVAELKGLNVSRIAVPVIGGHSGVTILPLLSQVQ 190
[Close]
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDH_PECCP (Malate dehydrogenase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=mdh PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.801e-50
Identity = 109/198 (55.05%), Postives = 135/198 (68.18%), Query Frame = 1 
Query:  184 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVKPPVAYSRE 771
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++G+ G+   + AL G D+V+I AGV RKPGM R DLFN+NAGIVR L E IA  CP A + +I+NPVN+TV IAAEV KKAG YD  KL GVT LD++R+NTFVAE                H+GVT LPLLSQV P +++S +
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGYSGE-DAKPALAGADIVLISAGVARKPGMDRSDLFNVNAGIVRNLVEQIAVTCPKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPQDINVPVIGGHSGVTILPLLSQV-PGISFSEQ 197
The following BLAST results are available for this feature:
BLAST of EY659430 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 303
Match NameE-valueIdentityDescription
MDH_YERPN2.145e-5055.05Malate dehydrogenase OS=Yersinia pestis bv. Antiqu... [more]
MDH_YERPG2.145e-5055.05Malate dehydrogenase OS=Yersinia pestis bv. Antiqu... [more]
MDH_YERPE2.145e-5055.05Malate dehydrogenase OS=Yersinia pestis GN=mdh PE=... [more]
MDH_YERPB2.145e-5055.05Malate dehydrogenase OS=Yersinia pseudotuberculosi... [more]
MDH_YERPA2.145e-5055.05Malate dehydrogenase OS=Yersinia pestis bv. Antiqu... [more]
MDH_YERP32.145e-5055.05Malate dehydrogenase OS=Yersinia pseudotuberculosi... [more]
MDH_PASMU2.145e-5057.37Malate dehydrogenase OS=Pasteurella multocida GN=m... [more]
MDH_HAES22.145e-5057.51Malate dehydrogenase OS=Haemophilus somnus (strain... [more]
MDH_HAES12.145e-5057.51Malate dehydrogenase OS=Haemophilus somnus (strain... [more]
MDH_PECCP2.801e-5055.05Malate dehydrogenase OS=Pectobacterium carotovorum... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-A09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659430 ID=EY659430; Name=EY659430; organism=Citrus sinensis; type=EST; length=898bp
ATGTATCATTATTGATCACATTCACACCACCATACTTCAACAAAGAAAAT
GGAGTTTAGCTCAGAGGCTAATCAGCGCATTGCTAGAATCTCTGCTCATC
TTTACCCTCCAAATCTCCAGATGGAGGAGAATTCTTGCTTGAGGCAAGCT
AAATGCCGGGCAAAAGGCGGGGCAGCTGGATTCAAAGTAGCCATCTTGGG
TGCTGCTGGAGGCATTGGTCAACCCCTTGCAATGCTAATGAAGATAAACC
CCCTGGTCTCAGTCCTTCACCTCTATGATGTTGTCAATACCCCTGGTGTC
ACTGCTGATATTAGCCATATGGACACCGGCGCTGTGGTACGGGGTTTCCT
AGGCCAGCCACAGCTTGAGAATGCTCTCACAGGGGTGGACCTTGTCATTA
TCCCTGCCGGCGTTCCGAGGAAGCCTGGAATGACCAGGGATGATCTTTTC
AATATCAATGCTGGAATTGTCAGGACACTCTGTGAAGGCATCGCAAAGTG
TTGCCCCAATGCGACTGTCAATTTGATCAGTAATCCAGTGAACTCTACAG
TTCCTATTGCCGCAGAGGTTTTCAAGAAAGCTGGTACTTATGATCCAAAG
AAACTCTTGGGAGTTACAATGCTCGATGTCGTAAGAGCCAACACATTCGT
GGCGGAAGTTTTGGGACTTGATCCTANGGATGTTGATGTTCCTGTTGTTG
GAGGTCATGCTGGAGTAACAAATTTGCCACTTTTATCACAGGTTAAGCCT
CCTGTAGCTTACTCAAGAGAAACTGATACCTGACGAACGCATACAAATGG
TGGACAAANNTNNGTGAGCAAAGCTGGGGCTGGCTCTGCACACTCTCATG
GCTATGCAGCGGTTAAATTTGCGATCTGCCTCGTGGGCTGAAAGAAAG
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