EY659427

Overview
NameEY659427
Unique NameEY659427
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length949
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY659427 vs. ExPASy Swiss-Prot
Match: KCS15_ARATH (3-ketoacyl-CoA synthase 15 OS=Arabidopsis thaliana GN=KCS15 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 6.154e-27
Identity = 61/172 (35.47%), Postives = 101/172 (58.72%), Query Frame = 1 
Query:   13 SLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNIALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQWHPG 528
            +L +   E   +IF  +D+L A T I+   I +LV+N  + +  PSL++ +IN Y LR++ +++NL GMGCSA V+A+DL + L   ++   A+VVSTE +   WY G + +++  N  FR G  +++L++    + +A  +L  LVRTH G  D +Y+     ED+    G
Sbjct:  154 NLRDGREEAAMVIFGAIDELLAATKINVKHIKILVLNCGVLNTTPSLSAMVINHYKLRHNTESYNLGGMGCSAGVIAIDLAKDLLNAHQGSYALVVSTEIVSFTWYSGNDVALLPPNCFFRMGAAAVMLSSRRIDRWRAKYQLMQLVRTHKGMEDTSYKSIELREDRDGKQG 325
The following BLAST results are available for this feature:
BLAST of EY659427 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
KCS15_ARATH6.154e-2735.473-ketoacyl-CoA synthase 15 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-A06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659427 ID=EY659427; Name=EY659427; organism=Citrus sinensis; type=EST; length=949bp
ANAAGATCACCTTCTTTAGCTGAGGCATTTTCAGAAATGGATGAAATCAT
TTTTGACACACTTGACAAGCTCTTTGCAAGAACAGATATTTCTCCATCTG
AAATTGACGTTCTTGTCGTGAATGTGTCGCTATTTTCTCCTGCTCCTTCT
CTTACATCTCGAATTATAAATCGCTACAACCTGAGGAACGATATTAAGGC
CTTCAATTTATCCGGAATGGGCTGCAGTGCAAGCGTGGTAGCCGTTGATC
TTGTGCAGCAGCTCTTCAGAACCTACAAAAACAAGCTTGCAATTGTTGTG
AGCACAGAGTCCATGGGACCTAACTGGTACTGCGGCAGAGAAAAATCTAT
GATGCTTTCGAATATTTTGTTCCGCTCAGGTGGGTGCTCAATGCTTTTGA
CGAACAACATAGCGTTAAAGCACAAAGCAATCTTGAAGTTGAACTGTTTA
GTGAGAACCCATTTTGGCTCAAACGATGAAGCTTATGAATGCTGTATGCA
AGTTGAAGATCAACAATGGCACCCCGGCTTTCGCCTCACGAAACAGCTAA
CAAAAGCTGCAGCTCTGGCTTTCACAATGAATCTNCAGGTTCTTGTTCCG
AAATATTGCCTCTCAGAGAGCAATTTCGGTATGTAATCCCATCCTATTAT
GAAAACAGAATCAGAAAAAGCACTTCTAGTACTAAACCCTGAACAGTACT
CGGAGCAGGTTTGAACCCTGAAGCTGGAATTGAGCCTTTCTGCTTACATC
CTGNAGGAANAAGCTGGGATTGATGGGACTGGAAAGGGCTNGAATTGGAT
GATACNATCTTGAGCANNCAGATTGCCGCTCATGGATTCGAAACCATCAG
CCGGGGCCTGGGGTATGTTTAGGCTACATGGAGCTAAAAGAAACTAAAAA
GTGACAGATCCTGAGATTACCCTGGACTGGTTTAATGCACACTGGGGCG
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