EY659415
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659415 vs. ExPASy Swiss-Prot
Match: RL3_THEVO (50S ribosomal protein L3P OS=Thermoplasma volcanium GN=rpl3p PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.579e-29 Identity = 72/212 (33.96%), Postives = 116/212 (54.72%), Query Frame = 3 Query: 63 VRVLAHTQIRKMKGLKQKKAHLMEIQVNGG-TIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKXXVIDTSSRLG 695 VR++ T+ + + G+ KK + E+++ GG ++ E+ +YA K I + + + +D++ VTKGKG+ G V R+GV LPRK + R + +G WHP V TV +AGQ GY RT N +V K K G+++ T I GGF HYG+VK+DY+++ G GP KR++ +R ++ ++ +K I S+ G Sbjct: 133 VRLIVATRNKDVPGIPSKKPEIFELRIGGGNSVKERFEYATAHLGKTIRFEDFSKPGKFVDVLSVTKGKGFTGHVQRFGVKLLPRKNRKHRRMIGTLGPWHPDWVRNTVPQAGQMGYQQRTISNVRVLKYSK-GEDADT-----------INVRGGFLHYGLVKNDYVLLFGSVPGPAKRLIKMRDPARQKVP--DIDNVKLDYISLESKQG 330
BLAST of EY659415 vs. ExPASy Swiss-Prot
Match: RL3_METMA (50S ribosomal protein L3P OS=Methanosarcina mazei GN=rpl3p PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.579e-29 Identity = 71/215 (33.02%), Postives = 115/215 (53.49%), Query Frame = 3 Query: 57 SVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR--GLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKXXVIDTSSRLG 695 S +R + +T + + G+ +K +ME ++ + K +YA + V VF+ ++D +T GKG +G V RWG+ K R LR++ +G+++P+RVS+ V + GQ GYH RTE NK++ K+G G+E +TP GGF +YG+V+ DY++IKG GP KR++ LR + + + L E I S+ G Sbjct: 139 SDIRAVTYTLPKSLTGVPKKVPDIMESGISAKDLGAKFEYAKSILGNLVNVTDVFKNGTVVDTAAITIGKGTQGPVKRWGIQLQKGKHSRQGSLRQIGTLGSFNPSRVSWRVPQMGQMGYHQRTEFNKRILKIGSDGEE--------------VTPEGGFINYGLVRGDYVLIKGSVPGPSKRLIRLRDPI--RAKKADLGEPNILYISRESKQG 337
BLAST of EY659415 vs. ExPASy Swiss-Prot
Match: RL3_METBU (50S ribosomal protein L3P OS=Methanococcoides burtonii (strain DSM 6242) GN=rpl3p PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.579e-29 Identity = 66/204 (32.35%), Postives = 109/204 (53.43%), Query Frame = 3 Query: 54 ASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR--GLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEI 659 A+ +R++ +T + G+ +K +ME V+G + K +YA + + VF +++D+ +T G G +G V RWG+ + K R LR+V +G W PA VS+ V +AGQ GYH RT+ NK++ K+ E + P GGF +YG+V+ +Y++IKG GP KR++ LR+ + S + +I Sbjct: 138 ANDIRLITYTLPSTLTGVPKKVPDVMETGVSGSDVKAKFEYAKTVLGTMVEISDVFDNGKIVDVAAITTGHGTQGPVKRWGINLMKNKHSRQGSLRQVGTLGPWTPAHVSWRVPQAGQMGYHQRTDYNKRILKMSSDVDE--------------VNPAGGFVNYGLVRGNYILIKGSVPGPSKRLIRLREPTRSKVSSIGEPQI 327
BLAST of EY659415 vs. ExPASy Swiss-Prot
Match: RL3_THEAC (50S ribosomal protein L3P OS=Thermoplasma acidophilum GN=rpl3p PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 4.674e-29 Identity = 76/231 (32.90%), Postives = 121/231 (52.38%), Query Frame = 3 Query: 9 PEEKYPSSAGEVKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGG-TIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKD-ITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKXXVIDTSSRLG 695 PE K + + Y V R++ T+ + + G+ KK + E+++ GG ++ E+++YA KQI + + +D++ +TKGKG+ G V R+GV LPRK + R + +G WHP V TV +AGQ G+ RT N +V K G ++ E D I GGF HYG VK+DY+++ G G KR++ +R ++ +EE+K I S+ G Sbjct: 116 PEIKKVAERDPPESYEDV-RIIVATRNKDVPGIPSKKPEIFELRIGGGNSVKERLEYAKNHLGKQITFTDFSKPGKFVDVVSITKGKGFTGHVKRFGVKLLPRKNRKHRRMIGTLGPWHPDWVRNTVPQAGQMGFQQRTISNVRVIKYG-------------NKEEVDSINVRGGFLHYGFVKNDYVLLFGSIPGASKRLIKMRDPARQKVP--DIEEVKLEYISLESKQG 330
BLAST of EY659415 vs. ExPASy Swiss-Prot
Match: RL3_CALMQ (50S ribosomal protein L3P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rpl3p PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 4.674e-29 Identity = 77/189 (40.74%), Postives = 109/189 (57.67%), Query Frame = 3 Query: 57 SVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG-GTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLR 614 S ++V+A TQ K G+ +K ++EI V G TI E+ YA G K++ VF+ +++D+IGVTKGKG +GV+ R+GV LPR K +G R+ +G PA V +T R GQ G+H RTE NK++ K+ G E ITP GGF HYGIV+ Y++I+G G KR++ R Sbjct: 145 SYIKVIAMTQPYKA-GVGKKTPEVLEIPVGGVPTIDEQFKYASGLLGKEVKPTDVFKPGQLVDVIGVTKGKGTQGVIKRFGVKELPRWHKHRKGSRRTGTVGP-KPA-VMYTQPRMGQMGFHRRTEYNKRILKISDNGSE--------------ITPKGGFKHYGIVRSGYMLIEGSTPGVVKRLIAFR 316
BLAST of EY659415 vs. ExPASy Swiss-Prot
Match: RL3_SULAC (50S ribosomal protein L3P OS=Sulfolobus acidocaldarius GN=rpl3p PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.041e-28 Identity = 74/187 (39.57%), Postives = 110/187 (58.82%), Query Frame = 3 Query: 63 VRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPA-RVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLR 614 +R+L TQ + L +K+ ++EIQ+ GG+I ++++Y KQIPV VF++ ++ DIIGVTKGKG++GV+ R+ V PR K +G RK IGA P+ V + GQ G+H RTE NK++ K+G E I P GG +YG+VK+ YL+I+G +G +KR + LR Sbjct: 148 MRLLVSTQPWLVPSLGKKRPEIVEIQIGGGSIQDQLNYGLSLLGKQIPVRDVFREGQLTDIIGVTKGKGFQGVIKRYSVVEFPRWHKHRKGSRK---IGARGPSISTPSYVPQPGQLGFHRRTEYNKRIIKIGDNVNE--------------INPAGGIVNYGLVKNTYLVIEGSVLGSRKRPLFLR 317
BLAST of EY659415 vs. ExPASy Swiss-Prot
Match: RL3_HALSA (50S ribosomal protein L3P OS=Halobacterium salinarium GN=rpl3p PE=3 SV=3) HSP 1 Score: 125.946 bits (315), Expect = 3.030e-28 Identity = 76/216 (35.19%), Postives = 115/216 (53.24%), Query Frame = 3 Query: 63 VRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDA---VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKXXVIDTSSRLG 695 +RV+ HT G+ +K +ME +V GGT+A+++++A E V A VF+ E D G+TKGKG +G V RWGV + K R R++ +G W+P+RV TV + GQ GYH RTE+NK++ + G + TP GGFP+YG V Y ++KG GP++R+V R ++ S E++ + T+S G Sbjct: 138 IRVITHTVPGDTAGVPKKNPDVMETRVGGGTLADRLEFAADLIEDG-GVHAFGDVFRAGEFTDAAGITKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDINDGDEP---------------TPDGGFPNYGEVDGPYTLVKGSVPGPEQRLVRFRPAVRPNESPRLDPEVR--YVSTASNQG 335
BLAST of EY659415 vs. ExPASy Swiss-Prot
Match: RL3_HALS3 (50S ribosomal protein L3P OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rpl3p PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 3.030e-28 Identity = 76/216 (35.19%), Postives = 115/216 (53.24%), Query Frame = 3 Query: 63 VRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDA---VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKXXVIDTSSRLG 695 +RV+ HT G+ +K +ME +V GGT+A+++++A E V A VF+ E D G+TKGKG +G V RWGV + K R R++ +G W+P+RV TV + GQ GYH RTE+NK++ + G + TP GGFP+YG V Y ++KG GP++R+V R ++ S E++ + T+S G Sbjct: 138 IRVITHTVPGDTAGVPKKNPDVMETRVGGGTLADRLEFAADLIEDG-GVHAFGDVFRAGEFTDAAGITKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDINDGDEP---------------TPDGGFPNYGEVDGPYTLVKGSVPGPEQRLVRFRPAVRPNESPRLDPEVR--YVSTASNQG 335
BLAST of EY659415 vs. ExPASy Swiss-Prot
Match: RL3_HALMA (50S ribosomal protein L3P OS=Haloarcula marismortui GN=rpl3p PE=1 SV=5) HSP 1 Score: 124.405 bits (311), Expect = 8.815e-28 Identity = 73/215 (33.95%), Postives = 117/215 (54.42%), Query Frame = 3 Query: 9 PEEKYPSSAGEVKKYASV------VRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSL 623 PE+ P +A E + A +R++ HT + + +KK +ME +V GG++++++D+A E + ++ +F+ E D+ GVTKGKG +G V RWGV + K R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G+G + T GGF +YG V Y ++KG GP KR+V R ++ Sbjct: 117 PEDHDPDAAEEQIRDAHEAGDLGDLRLITHTVPDAVPSVPKKKPDVMETRVGGGSVSDRLDHALDIVEDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEP---------------TVDGGFVNYGEVDGPYTLVKGSVPGPDKRLVRFRPAV 316
BLAST of EY659415 vs. ExPASy Swiss-Prot
Match: RL3_METBF (50S ribosomal protein L3P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rpl3p PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.565e-27 Identity = 64/191 (33.51%), Postives = 103/191 (53.93%), Query Frame = 3 Query: 57 SVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR--GLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSL 623 S +R + +T + + G+ +K +ME ++ + K +YA + + VF+ +ID +T GKG +G RWG+ + K R LR++ +G + RVS+ V + GQ GYH RTE NK++ K+G G+E +TP GGF +YG+V+ DY++IKG GP KR++ LR + Sbjct: 139 SDIRAVTYTLPKSLTGVPKKTPDIMESGISARDLNTKFEYAKSILGTLVSITDVFKTGTLIDTAAITIGKGTQGPAKRWGIQLMKGKHSRQGSLRQIGTLGGFGLRRVSWRVPQMGQTGYHQRTEFNKRILKIGSDGEE--------------VTPEGGFINYGLVRGDYVLIKGSVPGPSKRLIRLRDPI 315 The following BLAST results are available for this feature:
BLAST of EY659415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659415 ID=EY659415; Name=EY659415; organism=Citrus sinensis; type=EST; length=902bpback to top |