EY659415
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659415 vs. ExPASy Swiss-Prot
Match: RL3_NANEQ (50S ribosomal protein L3P OS=Nanoarchaeum equitans GN=rpl3p PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 4.375e-27 Identity = 66/203 (32.51%), Postives = 113/203 (55.67%), Query Frame = 3 Query: 54 ASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIK 662 A V+++ TQ K+K +K + +I + G + +K++YA K++ ++ VF++ + +D+I VTKGKG++GV+ R+ V R K+ +G+RKV IG+ P R+ TV GQ GYH RTE NK + K+G + + GG+ YG V +++KG GP+KR++ LR+++ + +E I+ Sbjct: 130 ADEVKIIVSTQPWKIK--LKKTPEIFDIPIGGSDVNKKLEYALSLLGKELSINDVFKEGQYVDVIAVTKGKGFQGVIKRFHVHRRQHKSEKGVRKVGAIGSRGPGRIFPTVPMPGQMGYHRRTEYNKLIIKIG-----------------EPLNVEGGWVRYGQVIGPTILLKGSVPGPRKRLIILREAIRPPRKQEKVEGIE 313
BLAST of EY659415 vs. ExPASy Swiss-Prot
Match: RL3_AERPE (50S ribosomal protein L3P OS=Aeropyrum pernix GN=rpl3p PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 4.375e-27 Identity = 75/207 (36.23%), Postives = 114/207 (55.07%), Query Frame = 3 Query: 15 EKYPSSAGEVKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKV-DYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSF-TVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSL 623 +K S E A VR++A +Q + GL +KK L+EI+V G + K+ DYA I V+ VF++ +++D+I VTKGKG++GV+ RWGV LPR K +G R+ IGA R +F +AGQ G+H RTE NK++ + G + +TP GGF YG+V+ ++M+ G G KR + +R ++ Sbjct: 128 DKMLKSLEERLDKAEDVRLIAASQPKLAGGLSKKKPDLLEIKVGGVSDVTKLFDYAKDVLGNLIAVNDVFEEGQLVDVIAVTKGKGFQGVIKRWGVKELPRWHKHRKGSRR---IGARSHGRSTFWETPQAGQTGFHRRTEYNKRILMIDDDGYK--------------VTPAGGFLRYGVVRSTFVMLSGSIPGTPKRPIVMRWAI 317
BLAST of EY659415 vs. ExPASy Swiss-Prot
Match: RL3_METS5 (50S ribosomal protein L3P OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rpl3p PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.704e-26 Identity = 74/215 (34.42%), Postives = 115/215 (53.49%), Query Frame = 3 Query: 57 SVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKXXVIDTSSRLG 695 S R+L TQ + L +K ++E+Q+ GG +++Y + V VF++ +++DIIGVTKG G++GV+ R+GV LPR K +G RKV G V + GQ G+H RTE NK++ K+ D T K I P GGF YG+VK+ YL+++G +G KR + LR + +++L + K +D +S+ G Sbjct: 145 SYFRLLVSTQPHLIPALGKKTPDIVEVQIGGGNTKNQLEYGLKLLGNTLSVRDVFKEGQLMDIIGVTKGHGFQGVIKRYGVQELPRWHKHRKGSRKVGTKGP--SLGTPSYVPQPGQMGFHRRTEYNKRILKIS-------------DDT-KLINPKGGFVRYGLVKNTYLLVQGSTIGSIKRPLFLRYPIRPYSAQLPVP--KVTYVDVNSKQG 341
BLAST of EY659415 vs. ExPASy Swiss-Prot
Match: RL3_HALWD (50S ribosomal protein L3P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rpl3p PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 3.135e-25 Identity = 65/191 (34.03%), Postives = 103/191 (53.93%), Query Frame = 3 Query: 63 VRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSL 623 VR++ HT M+ + +K +ME +V GGT+ ++V++ + + +F+ E +D GVTKGKG +G V R+GV + K R R++ +G W+P+RV TV + GQ GYH RTE+NK++ ++G G + T GGF YG V Y +IKG GP +R++ R ++ Sbjct: 141 VRLITHTLPAGMRNIPKKTPDVMETRVGGGTLTDRVEFGLDLISDGGEHEISDIFRAGEYLDAAGVTKGKGTQGPVKRFGVQKRKGKHARQGYRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIEIGNGDEP---------------TVDGGFVGYGEVDGPYALIKGSLPGPDQRLLRFRTAV 316 The following BLAST results are available for this feature:
BLAST of EY659415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659415 ID=EY659415; Name=EY659415; organism=Citrus sinensis; type=EST; length=902bpback to top |