EY659404
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659404 vs. ExPASy Swiss-Prot
Match: RCA_ORYSJ (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2) HSP 1 Score: 228.024 bits (580), Expect = 5.692e-59 Identity = 122/187 (65.24%), Postives = 138/187 (73.80%), Query Frame = 2 Query: 143 GAATSVPSSSFFGTSLKKVSSRIPPSKVPSAS---FKITA-EVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFARWASTHYDECRRNWKSGMLENPAK 691 GA S P++ F G LKK + S++ FK+ A E+DE KQT QDRWKGLAYD SDDQQDITRGKG VDSLFQAP G GTH AV+SSY+Y+SQGLRTY+ DNT+ G YIAPAFMDKLVVHI+KNFM+LPNIKVPLILGIWGGKGQGKSFQCELVFA+ +SG PAK Sbjct: 10 GAPASTPTN-FLGKKLKKQVTSAVNYHGKSSNINRFKVMAKELDEGKQTDQDRWKGLAYDISDDQQDITRGKGFVDSLFQAPTGDGTHEAVLSSYEYLSQGLRTYDFDNTMGGFYIAPAFMDKLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAK 195 HSP 2 Score: 95.5153 bits (236), Expect = 4.409e-19 Identity = 55/95 (57.89%), Postives = 63/95 (66.32%), Query Frame = 1 Query: 559 LGYLGRQRTRKIIPM*ACFRQMGINPL**VPEKLEKWHAGEPR*VIRQRYREAADIIRKGKMCCLMIHDLDARAGPMGGTTQYTVTTNGY-ATLM 840 LG G + K F +MGINP+ +LE +AGEP +IRQRYREAADII+KGKMCCL I+DLDA AG MGGTTQYTV ATLM Sbjct: 152 LGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLM 246
BLAST of EY659404 vs. ExPASy Swiss-Prot
Match: RCA_MAIZE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Zea mays GN=RCA1 PE=2 SV=3) HSP 1 Score: 228.024 bits (580), Expect = 5.692e-59 Identity = 123/191 (64.40%), Postives = 139/191 (72.77%), Query Frame = 2 Query: 143 GAATSVPS-SSFFGTSLKK--VSSRIP---PSKVPSASFKITA--EVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFARWASTHYDECRRNWKSGMLENPAK 691 GA S P+ SSF G L K VS+ + S ++ FK A EVDE KQT +DRWKGLAYD SDDQQDITRGKG VD+LFQAPMG GTH AV+SSYDYISQG ++YN DN +DG YIA FMDKLVVH++KNFM+LPNIKVPLILGIWGGKGQGKSFQCELVFA+ T +SG PAK Sbjct: 10 GAPASTPTRSSFLGKKLNKPQVSAAVTYHGKSSSSNSRFKAMAAKEVDETKQTDEDRWKGLAYDISDDQQDITRGKGLVDNLFQAPMGDGTHVAVLSSYDYISQGQKSYNFDNMMDGFYIAKGFMDKLVVHLSKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGITPIMMSAGELESGNAGEPAK 200 HSP 2 Score: 87.4261 bits (215), Expect = 1.201e-16 Identity = 51/95 (53.68%), Postives = 61/95 (64.21%), Query Frame = 1 Query: 559 LGYLGRQRTRKIIPM*ACFRQMGINPL**VPEKLEKWHAGEPR*VIRQRYREAADIIRKGKMCCLMIHDLDARAGPMGGTTQYTVTTNGY-ATLM 840 LG G + K F +MGI P+ +LE +AGEP +IRQRYREA+D+I+KGKM CL I+DLDA AG MGGTTQYTV ATLM Sbjct: 157 LGIWGGKGQGKSFQCELVFAKMGITPIMMSAGELESGNAGEPAKLIRQRYREASDLIKKGKMSCLFINDLDAGAGRMGGTTQYTVNNQMVNATLM 251
BLAST of EY659404 vs. ExPASy Swiss-Prot
Match: RCAB_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplastic OS=Hordeum vulgare GN=RCAB PE=2 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 6.958e-57 Identity = 112/163 (68.71%), Postives = 129/163 (79.14%), Query Frame = 2 Query: 143 GAATSVPSSSFFGTSLKKVSSRIPPSKVPSASFKITA---EVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAR 622 GA S P+ F G +K +K+ S ++ A E+D+ KQT DRWKGLAYD SDDQQDITRGKG VDSLFQAPMG GTH A++SSY+YISQGLR Y+ DNT+DGLYIAPAFMDKL+VH+ KNFM+LPNIKVPLILGIWGGKGQGKSFQCELVFA+ Sbjct: 10 GAPASTPTI-FLGKKVKNYYHG--GNKMKSRVVRVMAAKKELDQGKQTDADRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDNTMDGLYIAPAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAK 169 HSP 2 Score: 88.5817 bits (218), Expect = 5.390e-17 Identity = 54/95 (56.84%), Postives = 61/95 (64.21%), Query Frame = 1 Query: 559 LGYLGRQRTRKIIPM*ACFRQMGINPL**VPEKLEKWHAGEPR*VIRQRYREAADIIRKGKMCCLMIHDLDARAGPMGGTTQYTVTTNGY-ATLM 840 LG G + K F +MGINP+ +LE + GEP +IRQRYREAADII KGKMCCL I+DLDA AG MGGTTQYTV ATLM Sbjct: 149 LGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGN-GEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLM 242
BLAST of EY659404 vs. ExPASy Swiss-Prot
Match: RCA_SPIOL (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 214.157 bits (544), Expect = 8.505e-55 Identity = 115/215 (53.49%), Postives = 140/215 (65.12%), Query Frame = 2 Query: 110 AAAVPLSFNGSGAATSVPSSSFFGTSLKKVSS-RIPPSKVPSASFKITAEVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFARWASTHYDECRRNWKSGMLENPAK*SGRGTVRQLTLSGRGKCAA 751 A PL+ NGS A SVP+S F G+SLKK ++ R P S S + +T + EN++ D+W LA D SDDQ DI RGKG VDSLFQAP GTH + SS++Y SQGLR Y++DN + YIAPAFMDKLVVHITKNF++LPNIK+PLILG+WGGKGQGKSFQCELVFA+ +SG PAK + L +GK A Sbjct: 11 ATRAPLNLNGSSAGASVPTSGFLGSSLKKHTNVRFPSS---SRTTSMTVKAAENEEKNTDKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLRKYDIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELVFAKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCA 222 HSP 2 Score: 85.5001 bits (210), Expect = 4.563e-16 Identity = 50/95 (52.63%), Postives = 60/95 (63.16%), Query Frame = 1 Query: 559 LGYLGRQRTRKIIPM*ACFRQMGINPL**VPEKLEKWHAGEPR*VIRQRYREAADIIRKGKMCCLMIHDLDARAGPMGGTTQYTVTTNGY-ATLM 840 LG G + K F ++GINP+ +LE +AGEP +IRQRYREAAD+I KGKMC L I+DL+ AG MGGTTQYTV ATLM Sbjct: 159 LGVWGGKGQGKSFQCELVFAKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDLEPGAGRMGGTTQYTVNNQMVNATLM 253
BLAST of EY659404 vs. ExPASy Swiss-Prot
Match: RCAA_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplastic OS=Hordeum vulgare GN=RCAA PE=2 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 8.505e-55 Identity = 114/186 (61.29%), Postives = 133/186 (71.51%), Query Frame = 2 Query: 143 GAATSVPSSSFFGTSLKK-VSSRIPPSKVPSASFKITAEVDENKQTKQ--DRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFARWASTHYDECRRNWKSGMLENPAK 691 GA S P++ F G LKK V+S + S + + T EN K+ D+WKGLAYD SDDQQDITRGKG VDSLFQAP G GTH AV+SSY+Y+SQGLR Y+ DNT+ G YIAPAFMDKLVVH++KNFM+LPNIK+PLILGIWGGKGQGKSFQCELVFA+ +SG PAK Sbjct: 10 GAPASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGHGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAK 194 HSP 2 Score: 94.3597 bits (233), Expect = 9.822e-19 Identity = 54/95 (56.84%), Postives = 63/95 (66.32%), Query Frame = 1 Query: 559 LGYLGRQRTRKIIPM*ACFRQMGINPL**VPEKLEKWHAGEPR*VIRQRYREAADIIRKGKMCCLMIHDLDARAGPMGGTTQYTVTTNGY-ATLM 840 LG G + K F +MGINP+ +LE +AGEP +IRQRYREAAD+I+KGKMCCL I+DLDA AG MGGTTQYTV ATLM Sbjct: 151 LGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLM 245
BLAST of EY659404 vs. ExPASy Swiss-Prot
Match: RCA_CHLRE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.844e-33 Identity = 78/166 (46.99%), Postives = 100/166 (60.24%), Query Frame = 2 Query: 203 SRIPPSKVPSASFKITAEVDENKQTKQDRWKGL--AYDESDDQQDITRGKGAVDSLFQAPMGTG-THYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFARWASTHYDECRRNWKSGMLENPAK 691 +R+ V A ++ A + + RW+ + D SDDQQDITRG+ VD LFQ G G TH AV+SS +Y+SQ ++N N DG YI+PAF+DK+ +HI KNFM LP IKVPLILGIWGGKGQGK+FQC L + + +SG PAK Sbjct: 18 ARVATRSVRRAQLQVVAP----SRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCALAYKKLGIAPIVMSAGELESGNAGEPAK 177 HSP 2 Score: 80.8777 bits (198), Expect = 1.124e-14 Identity = 47/95 (49.47%), Postives = 60/95 (63.16%), Query Frame = 1 Query: 559 LGYLGRQRTRKIIPM*ACFRQMGINPL**VPEKLEKWHAGEPR*VIRQRYREAADIIRKGKMCCLMIHDLDARAGPMGGTTQYTVTTNGY-ATLM 840 LG G + K ++++GI P+ +LE +AGEP +IR RYREA+DII+KG+MC L I+DLDA AG MG TTQYTV ATLM Sbjct: 134 LGIWGGKGQGKTFQCALAYKKLGIAPIVMSAGELESGNAGEPAKLIRTRYREASDIIKKGRMCSLFINDLDAGAGRMGDTTQYTVNNQMVNATLM 228
BLAST of EY659404 vs. ExPASy Swiss-Prot
Match: RCA_ARAHY (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic (Fragments) OS=Arachis hypogaea GN=RCA PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.597e-22 Identity = 52/95 (54.74%), Postives = 53/95 (55.79%), Query Frame = 2 Query: 296 GLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGK 580 GLAYD SDDQQDITRG VDSLFQAPM GTHYAVMSSY+YISQGLR VPLILGIWGGK Sbjct: 1 GLAYDISDDQQDITRGM--VDSLFQAPMNDGTHYAVMSSYEYISQGLR------------------------------------VPLILGIWGGK 57 HSP 2 Score: 40.0466 bits (92), Expect = 3.597e-22 Identity = 28/73 (38.36%), Postives = 35/73 (47.95%), Query Frame = 1 Query: 619 QMGINPL**VPEKLEKWHAGEPR*VIRQRYREAADIIRKGKMCCLMIHDLDARAGPMGGTTQYTVTTNGYATL 837 +MGINP+ +LE +AGEP KMCCL I+DLDA A G VT N ++TL Sbjct: 57 KMGINPIMMSAGELESGNAGEP-----------------AKMCCLFINDLDAGA----GRVPIIVTGNDFSTL 108
BLAST of EY659404 vs. ExPASy Swiss-Prot
Match: RCA_ANASC (Ribulose bisphosphate carboxylase/oxygenase activase OS=Anabaena sp. (strain CA / ATCC 33047) GN=rca PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.468e-14 Identity = 35/50 (70.00%), Postives = 43/50 (86.00%), Query Frame = 2 Query: 473 YIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAR 622 YIAP F+DKL VHITKNF++LP ++VPLILGI G KG+GK+FQCEL F + Sbjct: 4 YIAPRFLDKLAVHITKNFLNLPGVRVPLILGIHGRKGEGKTFQCELAFEK 53
BLAST of EY659404 vs. ExPASy Swiss-Prot
Match: RCA_ANASP (Ribulose bisphosphate carboxylase/oxygenase activase OS=Anabaena sp. (strain PCC 7120) GN=rca PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.504e-14 Identity = 34/50 (68.00%), Postives = 43/50 (86.00%), Query Frame = 2 Query: 473 YIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAR 622 YIAP F+DKL VHITKNF+++P ++VPLILGI G KG+GK+FQCEL F + Sbjct: 4 YIAPRFLDKLAVHITKNFLNIPGVRVPLILGIHGRKGEGKTFQCELAFEK 53 The following BLAST results are available for this feature:
BLAST of EY659404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659404 ID=EY659404; Name=EY659404; organism=Citrus sinensis; type=EST; length=905bpback to top |