EY659394
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659394 vs. ExPASy Swiss-Prot
Match: MDHC_XENLA (Malate dehydrogenase, cytoplasmic OS=Xenopus laevis GN=mdh1 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 5.381e-29 Identity = 63/106 (59.43%), Postives = 79/106 (74.53%), Query Frame = 1 Query: 7 VRGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDG-SYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 321 ++G FITTVQQRGAA+IKARK CDH+RD GTPEG +VSMGV SDG SY VP L+YSFP+T +N W IV+GL I++FSR+K+D+TA+EL +EK Sbjct: 219 LKGGFITTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPEGQFVSMGVISDGNSYGVPEDLMYSFPLTIKNKTWKIVEGLCINDFSREKMDITAKELQDEK 324
BLAST of EY659394 vs. ExPASy Swiss-Prot
Match: MDHC_MOUSE (Malate dehydrogenase, cytoplasmic OS=Mus musculus GN=Mdh1 PE=1 SV=3) HSP 1 Score: 126.716 bits (317), Expect = 7.028e-29 Identity = 65/106 (61.32%), Postives = 78/106 (73.58%), Query Frame = 1 Query: 7 VRGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDG-SYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 321 ++GEFITTVQQRGAA+IKARK DHIRD GTPEG +VSMGV SDG SY VP L+YSFPV +N W V+GL I++FSR+K+DLTA+EL+EEK Sbjct: 219 LKGEFITTVQQRGAAVIKARKLSSAMSAAKAIADHIRDIWFGTPEGEFVSMGVISDGNSYGVPDDLLYSFPVVIKNKTWKFVEGLPINDFSREKMDLTAKELTEEK 324
BLAST of EY659394 vs. ExPASy Swiss-Prot
Match: MDHC_RAT (Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus GN=Mdh1 PE=1 SV=3) HSP 1 Score: 126.331 bits (316), Expect = 9.179e-29 Identity = 65/106 (61.32%), Postives = 78/106 (73.58%), Query Frame = 1 Query: 7 VRGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDG-SYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 321 ++GEFITTVQQRGAA+IKARK DHIRD GTPEG +VSMGV SDG SY VP L+YSFPV +N W V+GL I++FSR+K+DLTA+EL+EEK Sbjct: 219 LKGEFITTVQQRGAAVIKARKLSSAMSAAKAISDHIRDIWFGTPEGEFVSMGVISDGNSYGVPDDLLYSFPVVIKNKTWKFVEGLPINDFSREKMDLTAKELTEEK 324
BLAST of EY659394 vs. ExPASy Swiss-Prot
Match: MDHA_DICDI (Probable malate dehydrogenase 1 OS=Dictyostelium discoideum GN=mdhA PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 2.045e-28 Identity = 59/102 (57.84%), Postives = 72/102 (70.59%), Query Frame = 1 Query: 16 EFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 321 +FI VQ RGA +I ARK H+RDW+LGT +G VSM VYSDGSYNVP GLI+SFPVTC NG+WTIVQGL I+ +++K+D T +EL EEK Sbjct: 282 QFIPLVQNRGATVIAARKLSSAASAANAIVGHVRDWLLGTKDGEHVSMAVYSDGSYNVPKGLIFSFPVTCHNGQWTIVQGLKINSSTQQKIDATIKELQEEK 383
BLAST of EY659394 vs. ExPASy Swiss-Prot
Match: MDH_DEIDV (Malate dehydrogenase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=mdh PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 3.488e-28 Identity = 61/102 (59.80%), Postives = 72/102 (70.59%), Query Frame = 1 Query: 16 EFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 321 E+I TV +RGAAII+AR DH+RDW LGT EG WVSMG+ SDGSY VP GLIY FPVT ++G++ IVQGL I EFSR K+D TA EL EE+ Sbjct: 219 EYIPTVAKRGAAIIEARGASSAASAASAAIDHMRDWALGTSEGEWVSMGIPSDGSYGVPEGLIYGFPVTVKDGKYQIVQGLEISEFSRGKMDATARELEEER 320
BLAST of EY659394 vs. ExPASy Swiss-Prot
Match: MDH_MYCPA (Malate dehydrogenase OS=Mycobacterium paratuberculosis GN=mdh PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 7.771e-28 Identity = 60/105 (57.14%), Postives = 72/105 (68.57%), Query Frame = 1 Query: 7 VRGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 321 + +FI TV +RGAAII AR D RDW+LGTP G WVSM V SDGSY VP GLI SFPVT ++G+WTIVQGL IDEFSR ++D T EL++E+ Sbjct: 216 IENDFIPTVAKRGAAIIDARGASSAASAASATTDAARDWLLGTPAGDWVSMAVISDGSYGVPEGLISSFPVTTKDGDWTIVQGLEIDEFSRSRIDKTTAELADER 320
BLAST of EY659394 vs. ExPASy Swiss-Prot
Match: MDH_MYCA1 (Malate dehydrogenase OS=Mycobacterium avium (strain 104) GN=mdh PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 7.771e-28 Identity = 60/105 (57.14%), Postives = 72/105 (68.57%), Query Frame = 1 Query: 7 VRGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 321 + +FI TV +RGAAII AR D RDW+LGTP G WVSM V SDGSY VP GLI SFPVT ++G+WTIVQGL IDEFSR ++D T EL++E+ Sbjct: 216 IENDFIPTVAKRGAAIIDARGASSAASAASATTDAARDWLLGTPAGDWVSMAVISDGSYGVPEGLISSFPVTTKDGDWTIVQGLEIDEFSRSRIDKTTAELADER 320
BLAST of EY659394 vs. ExPASy Swiss-Prot
Match: MDHC_CHICK (Malate dehydrogenase, cytoplasmic OS=Gallus gallus GN=MDH1 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.325e-27 Identity = 61/106 (57.55%), Postives = 77/106 (72.64%), Query Frame = 1 Query: 7 VRGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDG-SYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 321 ++G+FI TVQQRGAA+IKARK CDH+RD GTP G +VSMGV SDG SY VP L+YSFPV ++ W V+GL I++FSR+K+DLTA+EL+EEK Sbjct: 219 LKGDFILTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPAGEFVSMGVISDGNSYGVPEDLLYSFPVVIKDKTWKFVEGLPINDFSREKMDLTAKELTEEK 324
BLAST of EY659394 vs. ExPASy Swiss-Prot
Match: MDH_ARTAT (Malate dehydrogenase OS=Arthrobacter aurescens (strain TC1) GN=mdh PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.731e-27 Identity = 59/106 (55.66%), Postives = 72/106 (67.92%), Query Frame = 1 Query: 7 VRGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 324 + EFI TV RGAAII+AR D RDW+LGTPEG WVSM V SDGSY VP GL+YS+PVT G W IV+GL +++FSR+K+D TA EL +E+A Sbjct: 215 IENEFIPTVAGRGAAIIEARGASSAASAASATIDAARDWLLGTPEGDWVSMAVASDGSYGVPEGLMYSYPVTTSGGNWEIVEGLEVNDFSRRKMDATAAELFDERA 320
BLAST of EY659394 vs. ExPASy Swiss-Prot
Match: MDH_NOCFA (Malate dehydrogenase OS=Nocardia farcinica GN=mdh PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.465e-26 Identity = 58/105 (55.24%), Postives = 71/105 (67.62%), Query Frame = 1 Query: 7 VRGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 321 +R +FI TVQQRG AII+AR DHI DWVLGTP G W SM V SDGSY VP GLI SFPVTC +G + IV+GL +D FSR+++D + EL+ E+ Sbjct: 219 LREDFIPTVQQRGTAIIQARGASSAASAASAAIDHIHDWVLGTPAGEWTSMAVPSDGSYGVPDGLISSFPVTCADGAYRIVEGLEVDAFSRERIDASVAELTAER 323 The following BLAST results are available for this feature:
BLAST of EY659394 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 169
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659394 ID=EY659394; Name=EY659394; organism=Citrus sinensis; type=EST; length=543bpback to top |