EY659394
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659394 vs. ExPASy Swiss-Prot
Match: MDH_MYCBT (Malate dehydrogenase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=mdh PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 9.499e-26 Identity = 58/106 (54.72%), Postives = 69/106 (65.09%), Query Frame = 1 Query: 7 VRGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 324 + EFI TV +RGAAII AR D RDW+LGTP WVSM V SDGSY VP GLI SFPVT + G WTIV GL IDEFSR ++D + EL++E++ Sbjct: 216 IEDEFIPTVAKRGAAIIDARGASSAASAASATIDAARDWLLGTPADDWVSMAVVSDGSYGVPEGLISSFPVTTKGGNWTIVSGLEIDEFSRGRIDKSTAELADERS 321
BLAST of EY659394 vs. ExPASy Swiss-Prot
Match: MDH_MYCBP (Malate dehydrogenase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=mdh PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 9.499e-26 Identity = 58/106 (54.72%), Postives = 69/106 (65.09%), Query Frame = 1 Query: 7 VRGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 324 + EFI TV +RGAAII AR D RDW+LGTP WVSM V SDGSY VP GLI SFPVT + G WTIV GL IDEFSR ++D + EL++E++ Sbjct: 216 IEDEFIPTVAKRGAAIIDARGASSAASAASATIDAARDWLLGTPADDWVSMAVVSDGSYGVPEGLISSFPVTTKGGNWTIVSGLEIDEFSRGRIDKSTAELADERS 321
BLAST of EY659394 vs. ExPASy Swiss-Prot
Match: MDH_MYCBO (Malate dehydrogenase OS=Mycobacterium bovis GN=mdh PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 9.499e-26 Identity = 58/106 (54.72%), Postives = 69/106 (65.09%), Query Frame = 1 Query: 7 VRGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 324 + EFI TV +RGAAII AR D RDW+LGTP WVSM V SDGSY VP GLI SFPVT + G WTIV GL IDEFSR ++D + EL++E++ Sbjct: 216 IEDEFIPTVAKRGAAIIDARGASSAASAASATIDAARDWLLGTPADDWVSMAVVSDGSYGVPEGLISSFPVTTKGGNWTIVSGLEIDEFSRGRIDKSTAELADERS 321
BLAST of EY659394 vs. ExPASy Swiss-Prot
Match: MDH_ACIAD (Malate dehydrogenase OS=Acinetobacter sp. (strain ADP1) GN=mdh PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.241e-25 Identity = 56/102 (54.90%), Postives = 71/102 (69.61%), Query Frame = 1 Query: 19 FITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 324 F+ TV +RGAAII+AR DH+RDW LGT G WV+MG+ SDGSY +P G+IY PVTC NGE+ V+GL IDEFSR+++D T +EL EE+A Sbjct: 221 FLPTVGKRGAAIIEARGLSSAASAANAAIDHMRDWALGT-NGKWVTMGIPSDGSYGIPEGVIYGVPVTCENGEYKRVEGLEIDEFSRERMDKTLQELEEERA 321
BLAST of EY659394 vs. ExPASy Swiss-Prot
Match: MDH_CHRVO (Malate dehydrogenase OS=Chromobacterium violaceum GN=mdh PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.620e-25 Identity = 58/105 (55.24%), Postives = 71/105 (67.62%), Query Frame = 1 Query: 10 RGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 324 R F+ TV +RGAAII+AR DHIRDWVLGT G WV+MGV SDGSY +P G++Y PV C NGE+ V+GL ID FSR+++DLT EL EE+A Sbjct: 216 RDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHIRDWVLGT-NGKWVTMGVPSDGSYGIPEGVMYGVPVVCENGEYKRVEGLEIDAFSRERMDLTLAELEEERA 319
BLAST of EY659394 vs. ExPASy Swiss-Prot
Match: MDH_SACEN (Malate dehydrogenase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=mdh PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.116e-25 Identity = 58/101 (57.43%), Postives = 67/101 (66.34%), Query Frame = 1 Query: 19 FITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 321 FI TV +RGAAII+AR DHI WV GTPEG W S V SDGSY VP GLI SFPV R+G + IVQGL IDEFSR+++D + ELSEE+ Sbjct: 219 FIPTVAKRGAAIIEARGASSAASAANAAIDHIHTWVNGTPEGDWTSAAVVSDGSYGVPEGLISSFPVVARDGRYEIVQGLEIDEFSRQRIDASVNELSEER 319
BLAST of EY659394 vs. ExPASy Swiss-Prot
Match: MDH_AZOSB (Malate dehydrogenase OS=Azoarcus sp. (strain BH72) GN=mdh PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.116e-25 Identity = 57/101 (56.44%), Postives = 71/101 (70.30%), Query Frame = 1 Query: 19 FITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 321 F+ TV +RGAAII+AR DHIRDWVLG+ G WV+MG+ SDGSY +P G+IY FPVT NGE+ IVQGL IDEFSR+++ +T EL EE+ Sbjct: 223 FLPTVGKRGAAIIEARGLSSAASAANAAIDHIRDWVLGS-NGEWVTMGIPSDGSYGIPEGVIYGFPVTTENGEYKIVQGLEIDEFSRERMTVTLNELLEER 322
BLAST of EY659394 vs. ExPASy Swiss-Prot
Match: MDH_PSYA2 (Malate dehydrogenase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=mdh PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 3.610e-25 Identity = 56/104 (53.85%), Postives = 69/104 (66.35%), Query Frame = 1 Query: 13 GEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDE-FSRKKLDLTAEELSEEK 321 G +I VQQRGAAIIKAR H+R WVLGT E WVSMGVYS+G Y + GLIYSFP TC NG+W+IV G+ + FS++K+ T +ELSEE+ Sbjct: 218 GTYIPEVQQRGAAIIKARGASSAASAANAAIAHMRTWVLGTDENDWVSMGVYSNGEYGIAKGLIYSFPCTCTNGDWSIVDGVDVSSAFSKEKMAATEQELSEER 321
BLAST of EY659394 vs. ExPASy Swiss-Prot
Match: MDH_ACIBY (Malate dehydrogenase OS=Acinetobacter baumannii (strain AYE) GN=mdh PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 3.610e-25 Identity = 56/102 (54.90%), Postives = 71/102 (69.61%), Query Frame = 1 Query: 19 FITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 324 F+ TV +RGAAII+AR DH+RDW LGT G WV+MGV SDGSY +P G+++ FPVT NGE+ IVQGL IDEFSR++++ T EL EE+A Sbjct: 221 FLPTVGKRGAAIIEARGLSSAASAANAAIDHMRDWALGT-NGKWVTMGVPSDGSYGIPEGVMFGFPVTTENGEYKIVQGLEIDEFSRERINFTLNELEEERA 321
BLAST of EY659394 vs. ExPASy Swiss-Prot
Match: MDH_ACIBT (Malate dehydrogenase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=mdh PE=3 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 3.610e-25 Identity = 56/102 (54.90%), Postives = 71/102 (69.61%), Query Frame = 1 Query: 19 FITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 324 F+ TV +RGAAII+AR DH+RDW LGT G WV+MGV SDGSY +P G+++ FPVT NGE+ IVQGL IDEFSR++++ T EL EE+A Sbjct: 221 FLPTVGKRGAAIIEARGLSSAASAANAAIDHMRDWALGT-NGKWVTMGVPSDGSYGIPEGVMFGFPVTTENGEYKIVQGLEIDEFSRERINFTLNELEEERA 321 The following BLAST results are available for this feature:
BLAST of EY659394 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 169
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659394 ID=EY659394; Name=EY659394; organism=Citrus sinensis; type=EST; length=543bpback to top |