EY659394
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659394 vs. ExPASy Swiss-Prot
Match: MDH_XANC8 (Malate dehydrogenase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=mdh PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.340e-24 Identity = 55/104 (52.88%), Postives = 72/104 (69.23%), Query Frame = 1 Query: 13 GEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 324 G FI TV +RGAAII+AR DH+RDWVLG+ G WV+MGV SDGSY +P G+I+ FPVT NG++T+V+ L ID+FS+K +D T EL EE++ Sbjct: 219 GTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGS-NGKWVTMGVPSDGSYGIPEGVIFGFPVTTENGQYTLVKDLPIDDFSQKYIDKTLAELEEERS 321
BLAST of EY659394 vs. ExPASy Swiss-Prot
Match: MDH_STRGG (Malate dehydrogenase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=mdh PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.340e-24 Identity = 54/101 (53.47%), Postives = 70/101 (69.31%), Query Frame = 1 Query: 19 FITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 321 FI TV +RGAAII+AR DH+ WV GT EG W SMG+ SDGSY VP G+I SFPVT ++G++ IVQGL I+EFSR ++D + +EL+EE+ Sbjct: 220 FIPTVAKRGAAIIEARGASSAASAANAAIDHVHTWVNGTAEGDWTSMGIPSDGSYGVPEGIISSFPVTTKDGKYEIVQGLDINEFSRTRIDASVKELTEER 320
BLAST of EY659394 vs. ExPASy Swiss-Prot
Match: MDH_NOCSJ (Malate dehydrogenase OS=Nocardioides sp. (strain BAA-499 / JS614) GN=mdh PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.340e-24 Identity = 54/105 (51.43%), Postives = 69/105 (65.71%), Query Frame = 1 Query: 7 VRGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 321 + FI TV +RGAAII+AR D RDW+ G+ + WVSM V SDGSY VP GLI SFPVT ++G+W IVQGL ID+FSR K+D + EL++E+ Sbjct: 215 IESTFIPTVAKRGAAIIEARGSSSAASAASATIDAARDWLFGSADADWVSMAVVSDGSYGVPEGLISSFPVTTKDGDWEIVQGLEIDDFSRAKIDASTAELADER 319
BLAST of EY659394 vs. ExPASy Swiss-Prot
Match: MDH_MYCUA (Malate dehydrogenase OS=Mycobacterium ulcerans (strain Agy99) GN=mdh PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.340e-24 Identity = 56/101 (55.45%), Postives = 67/101 (66.34%), Query Frame = 1 Query: 19 FITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 321 FI TV +RGA II AR D R W+LGTP WVSM V SDGSY VP GLI SFPVT ++G W+IV+GL IDEFSR ++D TA EL++E+ Sbjct: 220 FIPTVAKRGATIIDARGASSAASAASASVDAARSWLLGTPADDWVSMAVLSDGSYGVPEGLISSFPVTTKDGNWSIVKGLEIDEFSRGRIDKTAAELADER 320
BLAST of EY659394 vs. ExPASy Swiss-Prot
Match: MDH_MYCMM (Malate dehydrogenase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=mdh PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.340e-24 Identity = 56/101 (55.45%), Postives = 67/101 (66.34%), Query Frame = 1 Query: 19 FITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 321 FI TV +RGAAII AR D R W+LGTP WVSM V SDGSY VP GLI SFPVT ++G W+IV+GL IDEFSR ++D T EL++E+ Sbjct: 220 FIPTVAKRGAAIIDARGASSAASAASATVDAARSWLLGTPADDWVSMAVLSDGSYGVPEGLISSFPVTTKDGNWSIVKGLEIDEFSRGRIDKTTAELADER 320
BLAST of EY659394 vs. ExPASy Swiss-Prot
Match: MDH_BORPD (Malate dehydrogenase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=mdh PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.340e-24 Identity = 56/104 (53.85%), Postives = 70/104 (67.31%), Query Frame = 1 Query: 10 RGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 321 R FI TV +RGAAII+AR DH+RDWVLG+ G WV+MG+ SDGSY +P G+IY PVT NGE+ V+GL ID FSR++LD T +EL EE+ Sbjct: 219 RDTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGS-NGKWVTMGIPSDGSYGIPEGIIYGVPVTTENGEYKRVEGLEIDAFSRERLDFTLKELLEER 321
BLAST of EY659394 vs. ExPASy Swiss-Prot
Match: MDH_DECAR (Malate dehydrogenase OS=Dechloromonas aromatica (strain RCB) GN=mdh PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.056e-24 Identity = 51/100 (51.00%), Postives = 73/100 (73.00%), Query Frame = 1 Query: 19 FITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEE 318 F+ TV +RGAAII+AR DH+RDWVLG+ E WV+MGV SDGSY +PAG+++ FP C+ G+++I+QGL IDE+SR+K++ T +EL++E Sbjct: 223 FLPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGSDE--WVTMGVPSDGSYGIPAGIVFGFPCECKGGKFSIIQGLEIDEYSREKINFTLKELTDE 320
BLAST of EY659394 vs. ExPASy Swiss-Prot
Match: MDH_XANC5 (Malate dehydrogenase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=mdh PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 3.991e-24 Identity = 56/102 (54.90%), Postives = 71/102 (69.61%), Query Frame = 1 Query: 19 FITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 324 FI TV +RGAAII+AR DHIRDWVLGT G WV+MGV SDGSY +P G+++ FPVT NG++TIV+ L ID+FS+K +D T EL EE++ Sbjct: 221 FIPTVGKRGAAIIEARGLSSAASAANAAIDHIRDWVLGT-NGKWVTMGVPSDGSYGIPEGVMFGFPVTTENGKYTIVKDLPIDDFSQKYIDKTLAELEEERS 321
BLAST of EY659394 vs. ExPASy Swiss-Prot
Match: MDH_XANAC (Malate dehydrogenase OS=Xanthomonas axonopodis pv. citri GN=mdh PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 3.991e-24 Identity = 56/102 (54.90%), Postives = 71/102 (69.61%), Query Frame = 1 Query: 19 FITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 324 FI TV +RGAAII+AR DHIRDWVLGT G WV+MGV SDGSY +P G+++ FPVT NG++TIV+ L ID+FS+K +D T EL EE++ Sbjct: 221 FIPTVGKRGAAIIEARGLSSAASAANAAIDHIRDWVLGT-SGKWVTMGVPSDGSYGIPEGVMFGFPVTTENGKYTIVKDLPIDDFSQKYIDKTLAELEEERS 321
BLAST of EY659394 vs. ExPASy Swiss-Prot
Match: MDH_POLSQ (Malate dehydrogenase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=mdh PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 3.991e-24 Identity = 55/102 (53.92%), Postives = 69/102 (67.65%), Query Frame = 1 Query: 19 FITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 324 FI TV +RGAAII+AR DHI DWVLGT G WV+MG+ S G Y +PA +IY FPVTC NGE+ +++GL IDEFSR+++ T EL EE+A Sbjct: 222 FIPTVGKRGAAIIEARGLSSAASAANAAIDHIHDWVLGT-NGKWVTMGIPSKGEYGIPAEVIYGFPVTCENGEYKMIEGLEIDEFSRERMTHTLNELLEEQA 322 The following BLAST results are available for this feature:
BLAST of EY659394 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 169
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659394 ID=EY659394; Name=EY659394; organism=Citrus sinensis; type=EST; length=543bpback to top |