EY659393

Overview
NameEY659393
Unique NameEY659393
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length492
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY659393 vs. ExPASy Swiss-Prot
Match: TBB_MYCPJ (Tubulin beta chain OS=Mycosphaerella pini GN=TUB1 PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 3.060e-35
Identity = 66/78 (84.62%), Postives = 75/78 (96.15%), Query Frame = 1 
Query:    7 VRWIPNNVKSSVCDIPPRGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 240
            V WIPNNV++++C IPPRGLKM+STF+GNSTSIQE+F+RV +QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV
Sbjct:  342 VEWIPNNVQTALCSIPPRGLKMSSTFVGNSTSIQELFKRVGDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
[Close]
BLAST of EY659393 vs. ExPASy Swiss-Prot
Match: TBB_LEIME (Tubulin beta chain OS=Leishmania mexicana PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 3.060e-35
Identity = 66/78 (84.62%), Postives = 72/78 (92.31%), Query Frame = 1 
Query:    7 VRWIPNNVKSSVCDIPPRGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 240
            + WIPNN+KSS+CDIPP+GLKM+ TFIGN+T IQEMFRRV EQFT MFRRK FLHWYTGEGMDEMEFTEAESNMNDLV
Sbjct:  344 IEWIPNNIKSSICDIPPKGLKMSVTFIGNNTCIQEMFRRVGEQFTGMFRRKRFLHWYTGEGMDEMEFTEAESNMNDLV 421
[Close]
BLAST of EY659393 vs. ExPASy Swiss-Prot
Match: TBB_ERYGR (Tubulin beta chain OS=Erysiphe graminis subsp. hordei GN=TUB2 PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 3.060e-35
Identity = 66/78 (84.62%), Postives = 75/78 (96.15%), Query Frame = 1 
Query:    7 VRWIPNNVKSSVCDIPPRGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 240
            V WIPNNV++++C IPPRGLKM+STF+GNSTSIQE+F+RV +QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV
Sbjct:  342 VEWIPNNVQTALCSIPPRGLKMSSTFVGNSTSIQELFKRVGDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
[Close]
BLAST of EY659393 vs. ExPASy Swiss-Prot
Match: TBB_COCHE (Tubulin beta chain OS=Cochliobolus heterostrophus GN=TUB1 PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 3.060e-35
Identity = 66/78 (84.62%), Postives = 75/78 (96.15%), Query Frame = 1 
Query:    7 VRWIPNNVKSSVCDIPPRGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 240
            V WIPNNV++++C IPPRGLKM+STF+GNSTSIQE+F+RV +QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV
Sbjct:  342 VEWIPNNVQTALCSIPPRGLKMSSTFVGNSTSIQELFKRVGDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
[Close]
BLAST of EY659393 vs. ExPASy Swiss-Prot
Match: TBB_CERBT (Tubulin beta chain OS=Cercospora beticola GN=TUB1 PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 3.060e-35
Identity = 66/78 (84.62%), Postives = 75/78 (96.15%), Query Frame = 1 
Query:    7 VRWIPNNVKSSVCDIPPRGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 240
            V WIPNNV++++C IPPRGLKM+STF+GNSTSIQE+F+RV +QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV
Sbjct:  342 VEWIPNNVQTALCSIPPRGLKMSSTFVGNSTSIQELFKRVGDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
[Close]
BLAST of EY659393 vs. ExPASy Swiss-Prot
Match: TBB_BOTFU (Tubulin beta chain OS=Botryotinia fuckeliana GN=tubA PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 3.060e-35
Identity = 66/78 (84.62%), Postives = 75/78 (96.15%), Query Frame = 1 
Query:    7 VRWIPNNVKSSVCDIPPRGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 240
            V WIPNNV++++C IPPRGLKM+STF+GNSTSIQE+F+RV +QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV
Sbjct:  342 VEWIPNNVQTALCSIPPRGLKMSSTFVGNSTSIQELFKRVGDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
[Close]
BLAST of EY659393 vs. ExPASy Swiss-Prot
Match: TBB_ASPPA (Tubulin beta chain OS=Aspergillus parasiticus GN=benR PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 3.060e-35
Identity = 66/78 (84.62%), Postives = 75/78 (96.15%), Query Frame = 1 
Query:    7 VRWIPNNVKSSVCDIPPRGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 240
            V WIPNN+++++C IPPRGLKM+STFIGNSTSIQE+F+RV +QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV
Sbjct:  342 VEWIPNNIQTALCSIPPRGLKMSSTFIGNSTSIQELFKRVGDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
[Close]
BLAST of EY659393 vs. ExPASy Swiss-Prot
Match: TBB_ASPOR (Tubulin beta chain OS=Aspergillus oryzae GN=benA56 PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 3.060e-35
Identity = 66/78 (84.62%), Postives = 75/78 (96.15%), Query Frame = 1 
Query:    7 VRWIPNNVKSSVCDIPPRGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 240
            V WIPNN+++++C IPPRGLKM+STFIGNSTSIQE+F+RV +QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV
Sbjct:  342 VEWIPNNIQTALCSIPPRGLKMSSTFIGNSTSIQELFKRVGDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
[Close]
BLAST of EY659393 vs. ExPASy Swiss-Prot
Match: TBB_ASPFL (Tubulin beta chain OS=Aspergillus flavus PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 3.060e-35
Identity = 66/78 (84.62%), Postives = 75/78 (96.15%), Query Frame = 1 
Query:    7 VRWIPNNVKSSVCDIPPRGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 240
            V WIPNN+++++C IPPRGLKM+STFIGNSTSIQE+F+RV +QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV
Sbjct:  342 VEWIPNNIQTALCSIPPRGLKMSSTFIGNSTSIQELFKRVGDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
[Close]
BLAST of EY659393 vs. ExPASy Swiss-Prot
Match: TBB2_ERYPI (Tubulin beta-2 chain OS=Erysiphe pisi GN=TUB2 PE=2 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 3.060e-35
Identity = 66/78 (84.62%), Postives = 75/78 (96.15%), Query Frame = 1 
Query:    7 VRWIPNNVKSSVCDIPPRGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 240
            V WIPNNV++++C IPPRGLKM+STF+GNSTSIQE+F+RV +QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV
Sbjct:  342 VEWIPNNVQTALCSIPPRGLKMSSTFVGNSTSIQELFKRVGDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
The following BLAST results are available for this feature:
BLAST of EY659393 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
TBB_MYCPJ3.060e-3584.62Tubulin beta chain OS=Mycosphaerella pini GN=TUB1 ... [more]
TBB_LEIME3.060e-3584.62Tubulin beta chain OS=Leishmania mexicana PE=3 SV=... [more]
TBB_ERYGR3.060e-3584.62Tubulin beta chain OS=Erysiphe graminis subsp. hor... [more]
TBB_COCHE3.060e-3584.62Tubulin beta chain OS=Cochliobolus heterostrophus ... [more]
TBB_CERBT3.060e-3584.62Tubulin beta chain OS=Cercospora beticola GN=TUB1 ... [more]
TBB_BOTFU3.060e-3584.62Tubulin beta chain OS=Botryotinia fuckeliana GN=tu... [more]
TBB_ASPPA3.060e-3584.62Tubulin beta chain OS=Aspergillus parasiticus GN=b... [more]
TBB_ASPOR3.060e-3584.62Tubulin beta chain OS=Aspergillus oryzae GN=benA56... [more]
TBB_ASPFL3.060e-3584.62Tubulin beta chain OS=Aspergillus flavus PE=3 SV=1[more]
TBB2_ERYPI3.060e-3584.62Tubulin beta-2 chain OS=Erysiphe pisi GN=TUB2 PE=2... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-F07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659393 ID=EY659393; Name=EY659393; organism=Citrus sinensis; type=EST; length=492bp
CCACGCGTCCGGTGGATCCCCAACAATGTGAAGTCCAGCGTGTGCGATAT
TCCACCACGTGGTCTGAAGATGGCATCTACTTTTATTGGTAACTCAACAT
CCATCCAAGAGATGTTCAGGAGGGTGAGTGAACAGTTTACTGCCATGTTC
CGGCGTAAGGCCTTTTTGCATTGGTATACTGGGGAGGGTATGGATGAGAT
GGAGTTCACTGAGGCAGAGAGCAACATGAATGACTTGGTGGCTGAGTACC
AACAATATCAGGATGCAACAGCTGATGATGAGGAAGAGTATGAGGAGGGC
CTTGACGAGAACTACGAGGGCTAAGAAAGGGTAGCAATCAAAGGGCAACC
ACAGAAAAAGAACGCTTGATGAGACCAACTCCCTTGTACTGTGGCTTCTT
TTGTTGTTGTTTACAATTTCTGTCTTTTAAGACGATATTGTTTGTTGTTC
TTTTCGAGCATTTGAATAAAGAATTGTTAGTTTGATCACCTT
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