EY659393
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659393 vs. ExPASy Swiss-Prot
Match: TBB3_SOYBN (Tubulin beta chain (Fragment) OS=Glycine max GN=TUBB PE=2 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 8.333e-33 Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 1 Query: 7 VRWIPNNVKSSVCDIPPRGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEF 207 V WIPNNVKSSVCDIPP+GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEF Sbjct: 342 VEWIPNNVKSSVCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEF 408
BLAST of EY659393 vs. ExPASy Swiss-Prot
Match: TBB3_ANEPH (Tubulin beta-3 chain (Fragment) OS=Anemia phyllitidis GN=TUBB3 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 8.333e-33 Identity = 67/78 (85.90%), Postives = 69/78 (88.46%), Query Frame = 1 Query: 7 VRWIPNNVKSSVCDIPPRGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 240 V WIPNNVKSSVCDIPP GLKMA TFIGNS+SIQEMFRR + TAMFRRKAFLHWYT EGMDEMEFTE ESNMNDLV Sbjct: 138 VEWIPNNVKSSVCDIPPVGLKMACTFIGNSSSIQEMFRRDATSLTAMFRRKAFLHWYTWEGMDEMEFTEEESNMNDLV 215
BLAST of EY659393 vs. ExPASy Swiss-Prot
Match: YI016_HUMAN (Putative tubulin beta chain-like protein ENSP00000290377 OS=Homo sapiens PE=5 SV=2) HSP 1 Score: 139.043 bits (349), Expect = 1.088e-32 Identity = 62/76 (81.58%), Postives = 72/76 (94.74%), Query Frame = 1 Query: 13 WIPNNVKSSVCDIPPRGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 240 W P+NVK+++CDIPPRGLKM+++FIGN+ +IQE+F VSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV Sbjct: 272 WFPDNVKTAICDIPPRGLKMSASFIGNNAAIQELFTCVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 347
BLAST of EY659393 vs. ExPASy Swiss-Prot
Match: TBB_USTMA (Tubulin beta chain OS=Ustilago maydis GN=UM05828 PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 1.421e-32 Identity = 60/78 (76.92%), Postives = 74/78 (94.87%), Query Frame = 1 Query: 7 VRWIPNNVKSSVCDIPPRGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 240 V WIPNNV+++ CDIPPRGLKM+ TFIGNST+IQ++F+R++EQF+AMF+RKAFLHWYTGEGMDEMEFTEAESN+ DL+ Sbjct: 342 VEWIPNNVQTAQCDIPPRGLKMSVTFIGNSTAIQDVFKRIAEQFSAMFKRKAFLHWYTGEGMDEMEFTEAESNLQDLI 419
BLAST of EY659393 vs. ExPASy Swiss-Prot
Match: TBB_MELLI (Tubulin beta chain OS=Melampsora lini GN=TUB1 PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 1.421e-32 Identity = 62/78 (79.49%), Postives = 73/78 (93.59%), Query Frame = 1 Query: 7 VRWIPNNVKSSVCDIPPRGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 240 V WIPNNV+++ CDI PRGLKM+ TFIGNST+IQ++F+R+++QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM DLV Sbjct: 342 VEWIPNNVQTAHCDIAPRGLKMSVTFIGNSTAIQDLFKRIADQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMQDLV 419
BLAST of EY659393 vs. ExPASy Swiss-Prot
Match: TBB_SCHPO (Tubulin beta chain OS=Schizosaccharomyces pombe GN=nda3 PE=1 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 1.856e-32 Identity = 62/78 (79.49%), Postives = 72/78 (92.31%), Query Frame = 1 Query: 7 VRWIPNNVKSSVCDIPPRGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 240 V WIP+NV +VC +PP+ LKM++TFIGNSTSIQE+FRR+ +QF+AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV Sbjct: 342 VEWIPDNVLKAVCSVPPKDLKMSATFIGNSTSIQEIFRRLGDQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
BLAST of EY659393 vs. ExPASy Swiss-Prot
Match: TBB_ENCIN (Tubulin beta chain OS=Encephalitozoon intestinalis GN=TUB2 PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.856e-32 Identity = 60/78 (76.92%), Postives = 74/78 (94.87%), Query Frame = 1 Query: 7 VRWIPNNVKSSVCDIPPRGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 240 V WIP+NVK++VCDI P GL+M++TF+GN+TSIQE+F+R+S+QFT MFRRKAFLHWYTGEGMDEMEF+EAESNMNDL+ Sbjct: 342 VEWIPSNVKTAVCDIAPTGLEMSATFVGNTTSIQELFKRISDQFTVMFRRKAFLHWYTGEGMDEMEFSEAESNMNDLL 419
BLAST of EY659393 vs. ExPASy Swiss-Prot
Match: TBB_ENCHE (Tubulin beta chain OS=Encephalitozoon hellem GN=TUB2 PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.856e-32 Identity = 60/78 (76.92%), Postives = 74/78 (94.87%), Query Frame = 1 Query: 7 VRWIPNNVKSSVCDIPPRGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 240 V WIP+NVK++VCDI P GL+M++TF+GN+TSIQE+F+R+S+QFT MFRRKAFLHWYTGEGMDEMEF+EAESNMNDL+ Sbjct: 342 VEWIPSNVKTAVCDIAPTGLEMSATFVGNTTSIQELFKRISDQFTVMFRRKAFLHWYTGEGMDEMEFSEAESNMNDLL 419
BLAST of EY659393 vs. ExPASy Swiss-Prot
Match: TBB_ENCCU (Tubulin beta chain OS=Encephalitozoon cuniculi GN=TUB2 PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.856e-32 Identity = 60/78 (76.92%), Postives = 74/78 (94.87%), Query Frame = 1 Query: 7 VRWIPNNVKSSVCDIPPRGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 240 V WIP+NVK++VCDI P GL+M++TF+GN+TSIQE+F+R+S+QFT MFRRKAFLHWYTGEGMDEMEF+EAESNMNDL+ Sbjct: 342 VEWIPSNVKTAVCDIAPTGLEMSATFVGNTTSIQELFKRISDQFTVMFRRKAFLHWYTGEGMDEMEFSEAESNMNDLL 419
BLAST of EY659393 vs. ExPASy Swiss-Prot
Match: TBB1_SUIBO (Tubulin beta-1 chain OS=Suillus bovinus GN=TUBB1 PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 3.166e-32 Identity = 62/78 (79.49%), Postives = 71/78 (91.03%), Query Frame = 1 Query: 7 VRWIPNNVKSSVCDIPPRGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 240 V WIPNNV S+ CDIPPRG+KMA TF+GNST+IQE+F+RVS+ FTAMF+RKAFLHWYT EGMDEMEFTEAESNM DL+ Sbjct: 342 VEWIPNNVLSAQCDIPPRGVKMAVTFLGNSTAIQELFKRVSDHFTAMFKRKAFLHWYTQEGMDEMEFTEAESNMQDLI 419 The following BLAST results are available for this feature:
BLAST of EY659393 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 235
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659393 ID=EY659393; Name=EY659393; organism=Citrus sinensis; type=EST; length=492bpback to top |