EY659393
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659393 vs. ExPASy Swiss-Prot
Match: TBB_BOMMO (Tubulin beta chain OS=Bombyx mori PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 5.055e-30 Identity = 55/78 (70.51%), Postives = 73/78 (93.59%), Query Frame = 1 Query: 7 VRWIPNNVKSSVCDIPPRGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 240 V WIPNNV+++VCDIPPRG+KM++TFIGN+T+IQE+F+R+SEQF AMF RKAFLHWYTGEGM+E +F EA++N++DL+ Sbjct: 342 VEWIPNNVQTAVCDIPPRGMKMSATFIGNTTAIQEIFKRISEQFAAMFSRKAFLHWYTGEGMEEGDFAEADNNVSDLL 419
BLAST of EY659393 vs. ExPASy Swiss-Prot
Match: TBB3_ECHMU (Tubulin beta-3 chain OS=Echinococcus multilocularis GN=TUB-3 PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 8.623e-30 Identity = 58/78 (74.36%), Postives = 71/78 (91.03%), Query Frame = 1 Query: 7 VRWIPNNVKSSVCDIPPRGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 240 V WIPNNVK++VCDIPP K+A TFIGN+T+IQE+F RVS+QF+AMFRR+AFLH++T EGMDEMEF+EAESNMNDL+ Sbjct: 342 VEWIPNNVKTAVCDIPPIDFKVAGTFIGNTTAIQELFTRVSDQFSAMFRRRAFLHFFTSEGMDEMEFSEAESNMNDLI 419
BLAST of EY659393 vs. ExPASy Swiss-Prot
Match: TBB1_GEOCN (Tubulin beta-1 chain OS=Geotrichum candidum PE=3 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 1.471e-29 Identity = 56/78 (71.79%), Postives = 69/78 (88.46%), Query Frame = 1 Query: 7 VRWIPNNVKSSVCDIPPRGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 240 V WIPNNV++++C +PP+ +KM++TFI NSTSIQE+F+RV +QF+AMFRRKAFLHWYT EGMD EF EAESNMNDLV Sbjct: 342 VEWIPNNVQTAICSVPPKDVKMSATFIANSTSIQELFKRVGDQFSAMFRRKAFLHWYTNEGMDITEFAEAESNMNDLV 419
BLAST of EY659393 vs. ExPASy Swiss-Prot
Match: TBB1_HUMAN (Tubulin beta-1 chain OS=Homo sapiens GN=TUBB1 PE=1 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 2.509e-29 Identity = 58/78 (74.36%), Postives = 69/78 (88.46%), Query Frame = 1 Query: 7 VRWIPNNVKSSVCDIPPRGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 240 V WIPNNVK +VCDIPPRGL MA+TFIGN+T+IQE+F RVSE F+AMF+RKAF+HWYT EGMD EF EAE+N++DLV Sbjct: 342 VEWIPNNVKVAVCDIPPRGLSMAATFIGNNTAIQEIFNRVSEHFSAMFKRKAFVHWYTSEGMDINEFGEAENNIHDLV 419
BLAST of EY659393 vs. ExPASy Swiss-Prot
Match: TBB_USTVI (Tubulin beta chain OS=Ustilago violacea PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 3.277e-29 Identity = 55/78 (70.51%), Postives = 69/78 (88.46%), Query Frame = 1 Query: 7 VRWIPNNVKSSVCDIPPRGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 240 V WIPNNV+S+ C++ PRGLKM+ TFIGN+TSIQE+F+RV + F MFRR+AFLHWYTGEGMDEMEF+EA +NM+DL+ Sbjct: 342 VEWIPNNVQSAHCEVAPRGLKMSVTFIGNNTSIQELFKRVGDHFDVMFRRRAFLHWYTGEGMDEMEFSEASANMHDLI 419
BLAST of EY659393 vs. ExPASy Swiss-Prot
Match: TBB_PORYE (Tubulin beta chain OS=Porphyra yezoensis GN=TUBB1 PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 3.277e-29 Identity = 56/78 (71.79%), Postives = 68/78 (87.18%), Query Frame = 1 Query: 7 VRWIPNNVKSSVCDIPPRGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 240 + WIPN +K+SVCD+ P G M++ FIGNST+IQ++F+RV F+AMF+RKAFLHWYTGEGMDEMEFTEAESNMNDLV Sbjct: 342 IDWIPNAIKASVCDVAPTGETMSAAFIGNSTAIQDIFKRVGSHFSAMFKRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
BLAST of EY659393 vs. ExPASy Swiss-Prot
Match: TBB_PORPU (Tubulin beta chain OS=Porphyra purpurea GN=TUBB1 PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 3.277e-29 Identity = 56/78 (71.79%), Postives = 68/78 (87.18%), Query Frame = 1 Query: 7 VRWIPNNVKSSVCDIPPRGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 240 + WIPN +K+SVCD+ P G M++ FIGNST+IQ++F+RV F+AMF+RKAFLHWYTGEGMDEMEFTEAESNMNDLV Sbjct: 342 IDWIPNAIKASVCDVAPTGETMSAAFIGNSTAIQDIFKRVGSHFSAMFKRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
BLAST of EY659393 vs. ExPASy Swiss-Prot
Match: TBB2_GEOCN (Tubulin beta-2 chain OS=Geotrichum candidum PE=3 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 4.429e-26 Identity = 47/78 (60.26%), Postives = 67/78 (85.90%), Query Frame = 1 Query: 7 VRWIPNNVKSSVCDIPPRGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 240 V WIPNNV++SVC++PP+GL ++TFI NST++QE+F R + QF+ MF+RK FLHWYTGEGM+ +EF+EA+S++ DL+ Sbjct: 344 VEWIPNNVQTSVCNVPPKGLTTSATFIANSTAVQELFERTANQFSVMFKRKGFLHWYTGEGMEPVEFSEAQSDLEDLI 421
BLAST of EY659393 vs. ExPASy Swiss-Prot
Match: TBB1_CHOCR (Tubulin beta-1 chain OS=Chondrus crispus GN=TUBB PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.289e-25 Identity = 51/78 (65.38%), Postives = 64/78 (82.05%), Query Frame = 1 Query: 7 VRWIPNNVKSSVCDIPPRGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 240 V WIP+N+K+SVCDIP G K++S FIGN+T+I+ F+R QF +MFRRKAFLHWY EGMDE+EF+EAESN+ DLV Sbjct: 344 VEWIPHNIKTSVCDIPAAGEKISSAFIGNTTAIEATFKRFGNQFRSMFRRKAFLHWYKSEGMDELEFSEAESNLADLV 421
BLAST of EY659393 vs. ExPASy Swiss-Prot
Match: TBBP_DROME (Probable tubulin beta chain CG32396 OS=Drosophila melanogaster GN=CG32396 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 7.070e-24 Identity = 45/78 (57.69%), Postives = 64/78 (82.05%), Query Frame = 1 Query: 7 VRWIPNNVKSSVCDIPPRGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 240 V WIPNN+K+++CDIPPRGLKM++TFIGN+T+IQ +F+R+ + +M RRKA LHWYTGEGM+E EF +A+ + ++ Sbjct: 341 VDWIPNNIKTAICDIPPRGLKMSATFIGNTTAIQTLFQRLLDASMSMLRRKAHLHWYTGEGMEEQEFQDAQQELQAII 418 The following BLAST results are available for this feature:
BLAST of EY659393 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 235
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659393 ID=EY659393; Name=EY659393; organism=Citrus sinensis; type=EST; length=492bpback to top |