EY659393
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659393 vs. ExPASy Swiss-Prot
Match: TBB2_SUIBO (Tubulin beta-2 chain OS=Suillus bovinus GN=TUBB2 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 4.583e-23 Identity = 47/78 (60.26%), Postives = 59/78 (75.64%), Query Frame = 1 Query: 7 VRWIPNNVKSSVCDIPPRGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 240 V WIP+NV S+C +PP G A+ + NST +QE+F+R +QF MF+R+AFLHWYTGEGMD MEFTEAESN DL+ Sbjct: 346 VEWIPDNVSVSLCSVPPVGQPQAAVALANSTCMQELFKRNLDQFALMFKRRAFLHWYTGEGMDVMEFTEAESNTQDLI 423
BLAST of EY659393 vs. ExPASy Swiss-Prot
Match: TBA_CANAL (Tubulin alpha chain OS=Candida albicans GN=TUB1 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 4.754e-12 Identity = 32/82 (39.02%), Postives = 47/82 (57.32%), Query Frame = 1 Query: 7 VRWIPNNVKSSVCDIPPRGLK--------MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 228 V W P K +C PP +K A + N+T+I E +RR+ +F M+ ++AF+HWY GEGM+E EFTEA ++ Sbjct: 345 VDWCPTGFKIGICYQPPTAIKGSELASASRAVCMLSNTTAIAEAWRRIDRKFDLMYSKRAFVHWYVGEGMEEGEFTEAREDL 426
BLAST of EY659393 vs. ExPASy Swiss-Prot
Match: TBA2_SCHPO (Tubulin alpha-2 chain OS=Schizosaccharomyces pombe GN=tub1 PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 1.383e-11 Identity = 31/82 (37.80%), Postives = 48/82 (58.54%), Query Frame = 1 Query: 7 VRWIPNNVKSSVCDIPPRGLK--------MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 228 V W P K +CD PP+ ++ A + N+TSI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ Sbjct: 344 VDWCPTGFKIGICDRPPQHIEGSEIAKVDRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDL 425
BLAST of EY659393 vs. ExPASy Swiss-Prot
Match: TBA1_YEAST (Tubulin alpha-1 chain OS=Saccharomyces cerevisiae GN=TUB1 PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 3.081e-11 Identity = 31/82 (37.80%), Postives = 46/82 (56.10%), Query Frame = 1 Query: 7 VRWIPNNVKSSVCDIPPRG--------LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 228 V W P K +C PP + A + N+TSI E ++R+ +F M+ ++AF+HWY GEGM+E EFTEA ++ Sbjct: 345 VDWCPTGFKIGICYEPPTATPNSQLATVDRAVCMLSNTTSIAEAWKRIDRKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDL 426
BLAST of EY659393 vs. ExPASy Swiss-Prot
Match: TBA3_YEAST (Tubulin alpha-3 chain OS=Saccharomyces cerevisiae GN=TUB3 PE=1 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 8.965e-11 Identity = 29/82 (35.37%), Postives = 47/82 (57.32%), Query Frame = 1 Query: 7 VRWIPNNVKSSVCDIPPR--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 228 V W P K +C PP + A + N+T+I + ++R+ ++F M+ ++AF+HWY GEGM+E EFTEA ++ Sbjct: 345 VDWCPTGFKIGICYEPPSVIPSSELANVDRAVCMLSNTTAIADAWKRIDQKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDL 426 The following BLAST results are available for this feature:
BLAST of EY659393 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 235
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659393 ID=EY659393; Name=EY659393; organism=Citrus sinensis; type=EST; length=492bpback to top |