EY659390

Overview
NameEY659390
Unique NameEY659390
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY659390 vs. ExPASy Swiss-Prot
Match: ADH_STAES (Alcohol dehydrogenase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=adh PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.616e-11
Identity = 39/144 (27.08%), Postives = 65/144 (45.14%), Query Frame = 2 
Query:  149 RETGDEDVRLKVLYCGICHTDLHNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKVIPTYTSINTDGTITYGGYSDQMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLK 580
            RE    +  +K  YCG+CHTDLH +KN     +  +  GHE  G V +                     AC +CE C    E  C  V+    +++       G  +++++ +  Y V+ P+++   AA+ + CAG+T Y  +K
Sbjct:   20 RELRPGEALVKTEYCGVCHTDLH-VKNADFGDVTGVTLGHEGIGRVIKIADNVDSLKVGDRVSIAWMYAACGNCEYCTTGRETLCRDVLNAGYTVD-------GAMAEEVIVDANYAVKVPENLDPAAASSITCAGVTTYKAVK 155
The following BLAST results are available for this feature:
BLAST of EY659390 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
ADH_STAES5.616e-1127.08Alcohol dehydrogenase OS=Staphylococcus epidermidi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-F04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659390 ID=EY659390; Name=EY659390; organism=Citrus sinensis; type=EST; length=889bp
CCACGCGTCCGAACCAATACAATAATGATAACATTGCCGTTCTCTCATCA
AAATGGCAAAATCACCAGAAGAAGAACATCCAGTAAAGGCCTTTGGGTGG
GCAGCCCGAGACAGCTCCGGCCATCTCTCCCCATTCAACTTCTCCAGAAG
GGAAACGGGTGATGAGGATGTGAGGCTGAAGGTATTGTATTGTGGGATCT
GCCATACTGATCTCCACAACATCAAGAATGAATGGGGCTTCTCTCTCTTC
CCTATGGTTCCTGGGCATGAAATTGCAGGGGAAGTGACAGAAGTTGGCAG
CAAAGTAAGAAAGGTTAAAGTGGGAGATAAAGTTGGAGTTGGATGCATGG
TTGGTGCATGCCACAGCTGCGAGAGCTGTGCCAATGACCTTGAAAATTAC
TGTCCGAAAGTGATACCCACCTACACTTCCATTAACACTGACGGAACAAT
CACATACGGAGGCTACTCTGATCAAATGGTTGCCAATGAGCGCTACATTG
TTCGATTCCCTGATAGCATGCCCCTTGATGCTGCTGCTCCCCTGCTTTGC
GCCGGGATTACCGTGTACAGTCCATTGAAATACTTTGAACTAGCAGAACA
TGGAAAGCATGTAGGCATCGTTGGGCTTGGTGGGCTTGGTCATGTCGCTG
TCAAATTTGCCAGGGCTTTTGGGGCAAAGTGACAGTAATTAGCACCTCTC
CNAGCAGAAGACTGAAGCTCTTGAAACATCTGGCGCTGATTCATTTTTGA
ATAGCGTGACCCCTGACNATTGCAGGGTGCATGGGCACATTGATGGATTA
TTGACACAGTGTCCGCTGTGCACCCCTTTTGCATTGGGCNGNCTTTAAAG
CCCAGGCAAGCTTGTTCTGGTGGGGTCCCACAAGCCACT
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