EY659383

Overview
NameEY659383
Unique NameEY659383
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8493 contig Csv1_Contig8493:122..997. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY659383 vs. ExPASy Swiss-Prot
Match: CB22_PEA (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 3.064e-46
Identity = 102/208 (49.04%), Postives = 133/208 (63.94%), Query Frame = 2 
Query:  251 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIQNGRLAMFAMLGFFLQLMSQVKGPVRT-C*HLSDPFAN 856
            WYGPDR  +L        E P YLTGE PGDYG+D  GLS  P+ FSK +  E+IH+RWAMLGA G + PE  ++ G   G EAVWFK G+ +     L+Y G    ++   + A+ A +++L+G  E YRI  G   ++ D L+PGG FDPLGLA DP+ FA LKVKE++NGRLAMF+M GFF+Q +   KGP+     HL+DP  N
Sbjct:   53 WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 256
[Close]
BLAST of EY659383 vs. ExPASy Swiss-Prot
Match: CB23_PETSP (Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 4.002e-46
Identity = 103/208 (49.52%), Postives = 132/208 (63.46%), Query Frame = 2 
Query:  251 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIQNGRLAMFAMLGFFLQLMSQVKGPVRT-C*HLSDPFAN 856
            WYGPDR  +L        E P YLTGE P DYG+D  GLS  P+ F+K +  E+IH RWAMLGA G + PE F + G   G EAVWFK GA +     L+Y G    ++   + A+ A ++VL+G  E YR+  G   ++ D L+PGG FDPLGLA+DP+ FA LKVKEI+NGRLAMF+M GFF+Q +   KGP+     HL+DP  N
Sbjct:   51 WYGPDRVKYLGPF---SGEAPSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGIKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 254
[Close]
BLAST of EY659383 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 5.227e-46
Identity = 103/208 (49.52%), Postives = 132/208 (63.46%), Query Frame = 2 
Query:  251 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIQNGRLAMFAMLGFFLQLMSQVKGPVRT-C*HLSDPFAN 856
            WYGPDR  +L        E P YLTGE PGDYG+D  GLS  P+ F+K +  E+IH RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y G    ++   + A+ A ++VL+G  E YRI  G   ++ D L+PGG FDPLGLA+DP+ FA LKVKEI+NGRLAMF+M GFF+Q +   KGP+     HL+DP  N
Sbjct:   49 WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 252
[Close]
BLAST of EY659383 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 6.827e-46
Identity = 103/208 (49.52%), Postives = 135/208 (64.90%), Query Frame = 2 
Query:  251 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIQNGRLAMFAMLGFFLQLMSQVKGPVRT-C*HLSDPFAN 856
            WYGPDR ++L  G L   E P YLTGE PGDYG+D  GLS  P+ F+K +  E+IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y G    I+   + A+ A ++VL+G  E YR+  G   ++ D L+PGG FDPLGLA DP+ FA +KVKE++NGRLAMF+M GFF+Q +   KGP+     HL+DP  N
Sbjct:   49 WYGPDRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVVDPLYPGGTFDPLGLADDPEAFADVKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 252
[Close]
BLAST of EY659383 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 6.827e-46
Identity = 102/208 (49.04%), Postives = 132/208 (63.46%), Query Frame = 2 
Query:  251 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIQNGRLAMFAMLGFFLQLMSQVKGPVRT-C*HLSDPFAN 856
            WYGPDR  +L        E P YLTGE PGDYG+D  GLS  P+ F+K +  E+IH RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y G    ++   + A+ A ++VL+G  E YR+  G   ++ D L+PGG FDPLGLA+DP+ FA LKVKEI+NGRLAMF+M GFF+Q +   KGP+     HL+DP  N
Sbjct:   51 WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 254
[Close]
BLAST of EY659383 vs. ExPASy Swiss-Prot
Match: CB22_ORYSJ (Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R PE=2 SV=2)

HSP 1 Score: 184.496 bits (467), Expect = 6.827e-46
Identity = 105/208 (50.48%), Postives = 134/208 (64.42%), Query Frame = 2 
Query:  251 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIQNGRLAMFAMLGFFLQLMSQVKGPVRT-C*HLSDPFAN 856
            WYG DR ++L  G L   E P YLTGE PGDYG+D  GLS  P+ F+K +  E+IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y G    I+   + A+ A ++VL+G  E YRI  G   ++ D L+PGG FDPLGLA DP+ FA LKVKEI+NGRLAMF+M GFF+Q +   KGP+     HL+DP  N
Sbjct:   45 WYGADRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 248
[Close]
BLAST of EY659383 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 6.827e-46
Identity = 102/208 (49.04%), Postives = 132/208 (63.46%), Query Frame = 2 
Query:  251 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIQNGRLAMFAMLGFFLQLMSQVKGPVRT-C*HLSDPFAN 856
            WYGPDR  +L        E P YLTGE PGDYG+D  GLS  P+ F+K +  E+IH RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y G    ++   + A+ A ++VL+G  E YR+  G   ++ D L+PGG FDPLGLA+DP+ FA LKVKEI+NGRLAMF+M GFF+Q +   KGP+     HL+DP  N
Sbjct:   50 WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 253
[Close]
BLAST of EY659383 vs. ExPASy Swiss-Prot
Match: CB21_ORYSJ (Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R PE=2 SV=2)

HSP 1 Score: 184.496 bits (467), Expect = 6.827e-46
Identity = 105/208 (50.48%), Postives = 134/208 (64.42%), Query Frame = 2 
Query:  251 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIQNGRLAMFAMLGFFLQLMSQVKGPVRT-C*HLSDPFAN 856
            WYG DR ++L  G L   E P YLTGE PGDYG+D  GLS  P+ F+K +  E+IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y G    I+   + A+ A ++VL+G  E YRI  G   ++ D L+PGG FDPLGLA DP+ FA LKVKEI+NGRLAMF+M GFF+Q +   KGP+     HL+DP  N
Sbjct:   49 WYGADRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 252
[Close]
BLAST of EY659383 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 8.916e-46
Identity = 103/208 (49.52%), Postives = 131/208 (62.98%), Query Frame = 2 
Query:  251 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIQNGRLAMFAMLGFFLQLMSQVKGPVRT-C*HLSDPFAN 856
            WYGPDR  +L        E P YLTGE PGDYG+D  GLS  P+ F+K +  E+IH RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y G    ++   + A+ A ++VL+G  E YRI  G   ++ D L+PGG FDPLGLA DP+ FA LKVKEI+NGRLAMF+M GFF+Q +   KGP+     HL+DP  N
Sbjct:   51 WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 254
[Close]
BLAST of EY659383 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 8.916e-46
Identity = 101/208 (48.56%), Postives = 132/208 (63.46%), Query Frame = 2 
Query:  251 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIQNGRLAMFAMLGFFLQLMSQVKGPVRT-C*HLSDPFAN 856
            WYGPDR  +L        E P YLTGE PGDYG+D  GLS  P+ F+K +  E+IH RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y G    ++   + A+ A +++L+G  E YR+  G   ++ D L+PGG FDPLGLA+DP+ FA LKVKEI+NGRLAMF+M GFF+Q +   KGP+     HL+DP  N
Sbjct:   49 WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 252
The following BLAST results are available for this feature:
BLAST of EY659383 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
CB22_PEA3.064e-4649.04Chlorophyll a-b binding protein AB80, chloroplasti... [more]
CB23_PETSP4.002e-4649.52Chlorophyll a-b binding protein 22R, chloroplastic... [more]
CB2B_SOLLC5.227e-4649.52Chlorophyll a-b binding protein 1B, chloroplastic ... [more]
CB29_MAIZE6.827e-4649.52Chlorophyll a-b binding protein M9, chloroplastic ... [more]
CB24_TOBAC6.827e-4649.04Chlorophyll a-b binding protein 40, chloroplastic ... [more]
CB22_ORYSJ6.827e-4650.48Chlorophyll a-b binding protein 2, chloroplastic O... [more]
CB21_TOBAC6.827e-4649.04Chlorophyll a-b binding protein 16, chloroplastic ... [more]
CB21_ORYSJ6.827e-4650.48Chlorophyll a-b binding protein 1, chloroplastic O... [more]
CB2G_SOLLC8.916e-4649.52Chlorophyll a-b binding protein 3C, chloroplastic ... [more]
CB22_TOBAC8.916e-4648.56Chlorophyll a-b binding protein 21, chloroplastic ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-E09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659383 ID=EY659383; Name=EY659383; organism=Citrus sinensis; type=EST; length=876bp
AAAGAAGCTCACCAGCAACACTCTGAAGATGGCTTCATTGGCAGCATCGT
CCACTCCTGCTGCCTCCATTGGAGTTAAGGAGATGCTTGGCAACCCTCTC
AATGTCAGCAGTGCTGTTAGGACTTCAGCTCCAGGTGCATCAAACCCTTC
TACTTTCAAGCCCGTTGCTCTCTTCTCCAAGAAGAAAGCCGCCCCTCCTG
CCAAGTCTAAGCCCGTCGCCGTCTCCCCCGTTAACGAAGAGCTCGCCAAG
TGGTATGGTCCTGACCGAAGAATTTTCTTGCCCGAGGGTCTCTTGGACAG
ATCTGAGATCCCTGAGTACTTGACCGGAGAAGTTCCCGGAGACTATGGTT
ACGATCCTTTTGGTCTCAGCAAGAAACCAGACGACTTCAGCAAATATCAG
GCATATGAATTGATTCATGCCAGATGGGCCATGCTTGGTGCTGCTGGTTT
CATCATTCCTGAAGCCTTTAACAAGTTTGGTGCTAACTGTGGTCCTGAAG
CTGTCTGGTTCAAGACTGGAGCTCTACTTCTTGATGGAAACACATTGAAC
TACTTCGGAAAGAACATCCCAATCAACCTTGTTTTTGCTGTCATTGCTGA
GATTGTTCTTGTAGGTGGTGCTGAATATTATAGAATCACCAACGGTTTGG
ATTTGGAGGACAAGCTTCACCCAGGTGGTCCATTTGACCCACTGGGATTA
GCAAAGGATCCTGACCAATTTGCATTGCTAAAAGTGAAGGAGATCCAGAA
TGGAAGACTTGCAATGTTTGCCATGCTTGGTTTCTTTCTCCAGCTTATGT
CACAGGTGAAAGGTCCAGTGAGAACTTGCTAACATCTCAGTGATCCTTTT
GCCAACACTTGCTTACGTGATCTCGG
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